Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.7e-54 215.7 106 100.0
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 3.1e-40 168.3 102 81.4
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.1e-37 159.8 98 81.6
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 4.3e-37 157.9 103 75.7
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 1.8e-32 142.5 103 63.1
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 1.9e-29 132.5 79 83.5
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 8.9e-19 97.1 101 41.6
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 3.4e-18 95.1 101 46.5
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 7.5e-18 94.0 100 48.0
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.3e-17 93.2 107 43.0
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 1.3e-17 93.2 101 44.6
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 1.3e-17 93.2 105 45.7
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 1.7e-17 92.8 101 45.5
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 2.2e-17 92.4 101 44.6
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.7e-17 91.7 108 41.7
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.7e-17 91.7 108 41.7
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 1.1e-16 90.1 99 43.4
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 1.1e-16 90.1 101 43.6
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 1.1e-16 90.1 101 44.6
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.9e-16 89.4 101 45.5
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.9e-16 89.4 101 42.6
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 2.4e-16 89.0 101 46.5
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 3.2e-16 88.6 101 42.6
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 3.2e-16 88.6 101 45.5
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 4.1e-16 88.2 101 44.6
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.2e-15 86.7 103 42.7
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 1.2e-15 86.7 101 40.6
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 1.2e-15 86.7 103 41.7
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 1.6e-15 86.3 101 41.6
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 4.6e-15 84.7 108 43.5
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 4.6e-15 84.7 103 40.8
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 7.8e-15 84.0 101 41.6
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 7.8e-15 84.0 101 41.6
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 1.3e-14 83.2 103 40.8
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 1.3e-14 83.2 97 42.3
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.7e-14 82.8 103 42.7
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 2.3e-14 82.4 98 36.7
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 2.3e-14 82.4 103 38.8
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 3.0e-14 82.0 102 39.2
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 3.9e-14 81.6 98 42.9
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 3.9e-14 81.6 101 42.6
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 3.9e-14 81.6 109 35.8
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 5.1e-14 81.3 102 39.2
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 1.1e-13 80.1 99 38.4
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 1.1e-13 80.1 101 40.6
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 1.1e-13 80.1 100 37.0
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 1.9e-13 79.3 101 43.6
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 4.3e-13 78.2 101 39.6
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 4.3e-13 78.2 108 39.8
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 5.6e-13 77.8 90 42.2
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 2.1e-12 75.9 100 35.0
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 2.1e-12 75.9 98 38.8
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 4.7e-12 74.7 100 35.0
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 6.2e-12 74.3 97 36.1
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 1.8e-11 72.8 102 36.3
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 3.1e-11 72.0 100 34.0
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 3.1e-11 72.0 100 35.0
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 4.0e-11 71.6 131 32.8
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 5.2e-11 71.2 100 34.0
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 5.2e-11 71.2 100 34.0
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 5.2e-11 71.2 100 34.0
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 1.5e-10 69.7 99 33.3
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 2.0e-10 69.3 80 42.5
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 2.6e-10 68.9 94 37.2
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 4.4e-10 68.2 78 44.9
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 9.9e-10 67.0 88 40.9
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 9.9e-10 67.0 78 43.6
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 6.4e-09 64.3 71 45.1
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 6.4e-09 64.3 78 41.0
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 8.4e-09 63.9 80 38.8
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 1.1e-08 63.5 90 43.3
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 1.1e-08 63.5 75 37.3
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 3.2e-08 62.0 69 44.9
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 2.1e-07 59.3 74 35.1
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 4.6e-07 58.2 77 32.5
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 2.3e-06 55.8 72 37.5


User provided reference genes

Program Settings