Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.1e-124 449.9 221 100.0
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 5.1e-109 397.9 209 95.7
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.7e-80 303.1 211 69.7
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.1e-78 296.2 203 69.0
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 5.9e-73 278.1 197 69.0
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 8.5e-72 274.2 211 64.0
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 2.2e-64 249.6 197 58.4
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 6.5e-64 248.1 192 58.3
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 5.5e-63 245.0 161 68.3
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.7e-62 242.7 183 62.8
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 3.6e-62 242.3 177 63.8
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 6.1e-62 241.5 185 62.7
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.4e-61 240.4 186 60.8
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 4.0e-61 238.8 184 61.4
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 6.7e-61 238.0 193 54.9
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 8.8e-61 237.7 184 62.5
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 8.8e-61 237.7 163 64.4
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.5e-60 236.9 184 58.2
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 2.0e-60 236.5 188 55.3
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 7.5e-60 234.6 199 56.8
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 9.7e-60 234.2 200 57.0
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 9.7e-60 234.2 163 63.2
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 9.7e-60 234.2 199 56.8
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.7e-59 233.4 178 61.2
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 2.2e-59 233.0 200 57.0
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 2.2e-59 233.0 195 55.4
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.2e-59 233.0 190 57.9
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 2.8e-59 232.6 190 57.4
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 3.7e-59 232.3 190 56.8
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 4.8e-59 231.9 164 65.9
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.3e-59 231.5 190 58.4
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 8.2e-59 231.1 161 61.5
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 8.2e-59 231.1 186 58.6
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 8.2e-59 231.1 190 60.0
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.4e-58 230.3 194 55.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.4e-58 230.3 185 59.5
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.8e-58 229.9 198 56.6
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 2.4e-58 229.6 198 57.6
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 2.4e-58 229.6 186 58.6
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.4e-58 229.6 162 66.0
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.4e-58 229.6 191 58.6
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 4.1e-58 228.8 191 58.6
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 5.3e-58 228.4 215 52.6
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 7.0e-58 228.0 204 53.4
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 9.1e-58 227.6 202 54.5
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.2e-57 227.3 189 56.6
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.2e-57 227.3 191 58.1
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.6e-57 226.9 161 62.1
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.6e-57 226.9 199 57.8
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 2.7e-57 226.1 193 56.0
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 7.7e-57 224.6 195 57.4
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.0e-56 224.2 159 62.3
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.3e-56 223.8 155 62.6
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.7e-56 223.4 198 53.5
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.7e-56 223.4 188 58.0
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 2.2e-56 223.0 199 55.8
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 2.9e-56 222.6 159 61.6
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.8e-56 222.2 193 53.4
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 6.5e-56 221.5 193 52.8
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.1e-55 220.7 178 55.1
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.5e-55 220.3 184 56.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 3.2e-55 219.2 163 59.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 3.2e-55 219.2 161 60.2
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.2e-55 219.2 186 57.5
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 9.4e-55 217.6 157 60.5
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.2e-54 217.2 189 53.4
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.2e-54 217.2 198 57.1
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 1.2e-54 217.2 157 63.7
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 1.6e-54 216.9 185 56.2
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.6e-54 216.9 158 62.0
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 2.1e-54 216.5 186 55.4
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.1e-54 216.5 193 52.8
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 2.7e-54 216.1 202 52.0
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 4.7e-54 215.3 193 54.9
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.7e-54 215.3 159 60.4
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 8.0e-54 214.5 184 55.4
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 1.0e-53 214.2 196 53.1
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.4e-53 213.8 198 54.0
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.4e-53 213.8 194 52.6
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 8.8e-53 211.1 198 53.0
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 8.8e-53 211.1 198 51.5
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 8.8e-53 211.1 198 51.5
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.2e-52 210.7 200 52.0
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.5e-52 210.3 192 53.1
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.5e-52 210.3 154 58.4
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.5e-52 210.3 176 54.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 2.0e-52 209.9 200 52.0
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 2.6e-52 209.5 166 59.0
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 2.6e-52 209.5 211 48.8
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 7.5e-52 208.0 180 56.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.3e-51 207.2 201 50.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.7e-51 206.8 203 51.7
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 4.8e-51 205.3 180 55.6
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 6.3e-51 204.9 149 59.7
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 1.8e-50 203.4 204 49.0
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 1.8e-50 203.4 204 49.0
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.8e-50 203.4 204 49.5
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 4.1e-50 202.2 206 49.5
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 7.0e-50 201.4 188 51.6
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 2.0e-49 199.9 185 55.1
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 3.5e-49 199.1 185 54.1
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 4.5e-49 198.7 185 54.1
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.0e-48 197.6 170 55.3
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 2.9e-48 196.1 185 53.0
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.4e-45 187.2 156 53.2
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.3e-45 186.4 166 51.8
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 4.1e-42 175.6 172 44.8
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 2.3e-40 169.9 169 45.0
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.5e-39 167.2 173 43.9
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.9e-39 166.8 196 46.4
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 2.1e-38 163.3 166 51.2
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 8.0e-38 161.4 210 41.0
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.8e-37 158.3 159 45.3
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.0e-36 156.8 192 40.6
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 1.7e-35 153.7 130 59.2
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.4e-35 151.8 190 40.0
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 1.2e-33 147.5 116 63.8
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.3e-32 144.1 125 57.6
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.7e-32 143.7 130 55.4
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.9e-31 140.2 89 70.8
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.2e-30 137.5 126 53.2
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 2.6e-28 129.8 115 54.8
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 3.5e-25 119.4 158 36.1
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 2.9e-19 99.8 70 60.0
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 4.1e-18 95.9 108 48.1
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 7.8e-17 91.7 70 52.9
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 1.3e-16 90.9 72 51.4
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.3e-16 90.9 68 58.8
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.3e-16 90.1 68 55.9
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 2.3e-16 90.1 73 56.2
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.9e-16 89.4 96 43.8
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.6e-14 84.0 146 30.8
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 4.4e-12 75.9 144 31.2
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 4.9e-11 72.4 46 69.6
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.6e-09 67.4 144 24.3
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 4.6e-09 65.9 49 63.3


User provided reference genes

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