Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026603 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.1e-68 263.1 126 100.0
AUR62036099 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.2e-57 226.5 114 91.2
AUR62014119 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.1e-44 183.3 122 68.0
AUR62023882 Chenopodium quinoa HOM05D002833 ORTHO05D003210 7.1e-39 164.1 118 62.7
AUR62019526 Chenopodium quinoa HOM05D002833 ORTHO05D003210 3.0e-37 158.7 109 67.9
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 2.5e-36 155.6 116 62.1
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 2.5e-36 155.6 116 62.1
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 2.5e-36 155.6 116 62.1
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-36 155.6 116 62.1
AUR62020375 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.1e-35 152.5 118 61.9
AUR62009244 Chenopodium quinoa HOM05D002833 ORTHO05D003210 5.2e-34 147.9 127 58.3
HanXRQChr02g0054271 Helianthus annuus HOM05D002833 ORTHO05D003210 2.2e-24 115.9 118 48.3
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-24 114.4 111 45.9
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-24 114.4 111 45.9
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-23 113.2 110 50.0
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.9e-23 112.8 118 47.5
HanXRQChr03g0061761 Helianthus annuus HOM05D002833 ORTHO05D003210 1.9e-23 112.8 127 43.3
AUR62035228 Chenopodium quinoa HOM05D002833 ORTHO05D003210 4.2e-23 111.7 92 57.6
AUR62029166 Chenopodium quinoa HOM05D002833 ORTHO05D003210 9.3e-23 110.5 126 42.1
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 3.5e-22 108.6 120 45.8
Sopen05g010840 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-22 108.2 118 44.1
AUR62024333 Chenopodium quinoa HOM05D002833 ORTHO05D003210 6.0e-22 107.8 128 42.2
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.0e-21 107.1 115 45.2
AUR62039401 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.0e-21 107.1 69 62.3
AUR62016350 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.3e-21 105.9 126 41.3
HanXRQChr08g0213721 Helianthus annuus HOM05D000061 ORTHO05D003210 2.3e-21 105.9 117 47.0
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.0e-21 105.5 118 44.9
AUR62027634 Chenopodium quinoa HOM05D002833 ORTHO05D003210 3.9e-21 105.1 126 40.5
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 3.9e-21 105.1 116 45.7
ECA233G2682 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-21 104.0 108 47.2
ECA238G1436 Erigeron canadensis HOM05D002833 ORTHO05D003210 8.7e-21 104.0 114 49.1
Ah.05g172100 Amaranthus hybridus HOM05D002833 ORTHO05D003210 1.1e-20 103.6 126 38.9
ECA233G4286 Erigeron canadensis HOM05D000002 ORTHO05D003210 1.9e-20 102.8 117 43.6
AUR62034558 Chenopodium quinoa HOM05D002833 ORTHO05D003210 3.3e-20 102.1 103 47.6
ECA248G3833 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.3e-20 102.1 122 43.4
AUR62042214 Chenopodium quinoa HOM05D002833 ORTHO05D003210 5.6e-20 101.3 127 39.4
AUR62033479 Chenopodium quinoa HOM05D002833 ORTHO05D003210 7.3e-20 100.9 124 41.1
HanXRQChr17g0542971 Helianthus annuus HOM05D002833 ORTHO05D003210 7.3e-20 100.9 120 42.5
AUR62024857 Chenopodium quinoa HOM05D002833 ORTHO05D003210 9.6e-20 100.5 124 41.1
ECA236G5050 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-19 100.1 124 41.9
AUR62007555 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.6e-19 99.8 78 60.3
ECA233G3435 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.1e-19 99.4 119 43.7
VMungo0331G0694 Vigna mungo HOM05D001474 ORTHO05D001461 4.8e-19 98.2 109 46.8
ECA246G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-19 97.8 107 46.7
AUR62028397 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.1e-19 97.4 76 57.9
ECA238G2166 Erigeron canadensis HOM05D002833 ORTHO05D003210 8.1e-19 97.4 103 48.5
ECA236G0516 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.8e-18 96.3 115 42.6
AUR62020789 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.4e-18 95.9 126 39.7
ECA246G4627 Erigeron canadensis HOM05D000022 ORTHO05D000744 4.0e-18 95.1 112 45.5
Sopen01g011230 Solanum pennellii HOM05D000047 ORTHO05D003210 4.0e-18 95.1 115 42.6
ECA246G0664 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-18 94.7 111 43.2
Medtr8g442260 Medicago truncatula HOM05D002833 ORTHO05D003210 6.9e-18 94.4 118 38.1
ECA233G0427 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-18 94.0 108 43.5
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 1.5e-17 93.2 115 39.1
PSO384G1482 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-16 88.6 124 37.1
PSO675G8345 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-16 88.6 124 37.1
PSO729G0013 Papaver somniferum HOM05D002833 ORTHO05D003210 3.8e-16 88.6 124 37.1
CANSAT78G2186 Cannabis sativa HOM05D002833 ORTHO05D003210 4.9e-16 88.2 114 36.8
PSO423G0090 Papaver somniferum HOM05D002833 ORTHO05D003210 4.9e-16 88.2 124 36.3
PSO675G9166 Papaver somniferum HOM05D002833 ORTHO05D003210 8.4e-16 87.4 123 35.8
Medtr5g044790 Medicago truncatula HOM05D002833 ORTHO05D003210 1.1e-15 87.0 128 35.9
PSO017G2161 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-15 87.0 113 40.7
PSO170G5705 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-15 87.0 124 37.1
PSO675G0475 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-15 87.0 124 36.3
ECA238G4367 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.4e-15 86.7 114 43.0
PSO384G1274 Papaver somniferum HOM05D002833 ORTHO05D003210 1.9e-15 86.3 124 36.3
PSO384G3504 Papaver somniferum HOM05D002833 ORTHO05D003210 1.9e-15 86.3 124 36.3
AUR62039580 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.4e-15 85.9 122 34.4
HanXRQChr13g0410331 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-15 85.9 116 39.7
PSO017G4031 Papaver somniferum HOM05D002833 ORTHO05D003210 4.2e-15 85.1 124 36.3
PSO782G2949 Papaver somniferum HOM05D002833 ORTHO05D003210 4.2e-15 85.1 125 35.2
PSO210G5263 Papaver somniferum HOM05D002833 ORTHO05D003210 5.4e-15 84.7 124 37.1
PSO675G4075 Papaver somniferum HOM05D002833 ORTHO05D003210 5.4e-15 84.7 124 36.3
PSO349G0083 Papaver somniferum HOM05D002833 ORTHO05D003210 7.1e-15 84.3 112 39.3
Ah.11g044560 Amaranthus hybridus HOM05D002833 ORTHO05D003210 9.3e-15 84.0 108 38.9
PSO063G2229 Papaver somniferum HOM05D002833 ORTHO05D003210 9.3e-15 84.0 112 37.5
AUR62021616 Chenopodium quinoa HOM05D021338 ORTHO05D003210 1.6e-14 83.2 125 35.2
PSO782G3831 Papaver somniferum HOM05D002833 ORTHO05D003210 2.1e-14 82.8 120 36.7
PSO210G2412 Papaver somniferum HOM05D002833 ORTHO05D003210 3.5e-14 82.0 124 36.3
PSO339G6159 Papaver somniferum HOM05D002833 ORTHO05D003210 3.5e-14 82.0 124 36.3
PSO675G7338 Papaver somniferum HOM05D002833 ORTHO05D003210 3.5e-14 82.0 124 36.3
PSO732G0034 Papaver somniferum HOM05D002833 ORTHO05D003210 4.6e-14 81.6 112 39.3
PSO063G3721 Papaver somniferum HOM05D002833 ORTHO05D003210 6.0e-14 81.3 119 37.8
PSO210G6292 Papaver somniferum HOM05D002833 ORTHO05D003210 6.0e-14 81.3 112 37.5
PSO063G4800 Papaver somniferum HOM05D002833 ORTHO05D003210 7.9e-14 80.9 125 33.6
PSO384G4886 Papaver somniferum HOM05D002833 ORTHO05D003210 7.9e-14 80.9 125 37.6
PSO541G4229 Papaver somniferum HOM05D002833 ORTHO05D003210 7.9e-14 80.9 129 31.0
PSO675G8443 Papaver somniferum HOM05D002833 ORTHO05D003210 7.9e-14 80.9 112 38.4
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 1.0e-13 80.5 80 47.5
PSO541G3964 Papaver somniferum HOM05D002833 ORTHO05D003210 1.3e-13 80.1 113 38.1
HanXRQChr03g0093111 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-13 79.7 112 42.0
PSO700G0004 Papaver somniferum HOM05D002833 ORTHO05D003210 1.7e-13 79.7 123 34.1
PSO724G0595 Papaver somniferum HOM05D002833 ORTHO05D003210 2.3e-13 79.3 112 35.7
ECA246G1417 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-13 79.0 111 41.4
PSO104G0123 Papaver somniferum HOM05D002833 ORTHO05D003210 3.0e-13 79.0 112 38.4
ECA247G0705 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-13 78.2 119 36.1
PSO135G1061 Papaver somniferum HOM05D002833 ORTHO05D003210 5.1e-13 78.2 116 35.3
PSO063G2619 Papaver somniferum HOM05D002833 ORTHO05D003210 6.6e-13 77.8 112 36.6
Sopen11g009220 Solanum pennellii HOM05D002833 ORTHO05D003210 6.6e-13 77.8 80 45.0
AUR62027485 Chenopodium quinoa HOM05D002833 ORTHO05D003210 8.7e-13 77.4 96 38.5
PSO170G1611 Papaver somniferum HOM05D002833 ORTHO05D003210 8.7e-13 77.4 123 34.1
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.1e-12 77.0 102 35.3
ECA238G2751 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-12 77.0 98 42.9
PSO170G0231 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-12 77.0 123 31.7
PSO384G1520 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-12 77.0 112 35.7
PSO541G0683 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-12 77.0 112 34.8
ECA232G1032 Erigeron canadensis HOM05D000356 ORTHO05D000265 1.5e-12 76.6 116 37.1
ECA240G3959 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-12 76.6 119 36.1
PSO170G2323 Papaver somniferum HOM05D002833 ORTHO05D003210 1.5e-12 76.6 112 35.7
PSO601G0001 Papaver somniferum HOM05D002833 ORTHO05D003210 1.5e-12 76.6 116 35.3
PSO732G0723 Papaver somniferum HOM05D002833 ORTHO05D003210 1.5e-12 76.6 112 35.7
ECA234G3324 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.9e-12 76.3 111 40.5
PSO339G5536 Papaver somniferum HOM05D002833 ORTHO05D003210 1.9e-12 76.3 112 36.6
Medtr8g074100 Medicago truncatula HOM05D002833 ORTHO05D003210 2.5e-12 75.9 114 35.1
PSO782G0726 Papaver somniferum HOM05D002833 ORTHO05D003210 2.5e-12 75.9 112 34.8
HanXRQChr06g0173581 Helianthus annuus HOM05D002833 ORTHO05D003210 3.3e-12 75.5 108 38.9
PSO017G0356 Papaver somniferum HOM05D002833 ORTHO05D003210 3.3e-12 75.5 112 34.8
ECA246G4759 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-12 75.1 114 39.5
THA.LOC109116961 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 4.3e-12 75.1 112 33.9
PSO541G3398 Papaver somniferum HOM05D002833 ORTHO05D003210 5.6e-12 74.7 112 35.7
ECA234G0889 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-12 74.3 113 40.7
HanXRQChr10g0295801 Helianthus annuus HOM05D002833 ORTHO05D003210 9.6e-12 73.9 115 37.4
ECA247G0228 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.8e-11 72.4 115 35.7
ECA238G0718 Erigeron canadensis HOM05D002833 ORTHO05D003210 4.8e-11 71.6 108 38.9
PSO151G0172 Papaver somniferum HOM05D002833 ORTHO05D003210 8.1e-11 70.9 112 34.8
Sp6g08170 Schrenkiella parvula HOM05D002833 ORTHO05D003210 8.1e-11 70.9 102 36.3
ECA236G0409 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 110 40.0
Ah.16g105900 Amaranthus hybridus HOM05D000448 ORTHO05D003210 1.4e-10 70.1 80 42.5
ECA246G2299 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-10 70.1 102 32.4
PSO675G6366 Papaver somniferum HOM05D002833 ORTHO05D003210 1.4e-10 70.1 125 29.6
PSO832G4022 Papaver somniferum HOM05D002833 ORTHO05D003210 1.8e-10 69.7 112 33.9
PSO675G7985 Papaver somniferum HOM05D002833 ORTHO05D003210 2.4e-10 69.3 112 32.1
EL10Ac6g14483 Beta vulgaris HOM05D002833 ORTHO05D003210 3.1e-10 68.9 108 35.2
ECA238G2538 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-10 68.9 119 37.0
ECA236G4198 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-10 68.2 102 33.3
HanXRQChr03g0072991 Helianthus annuus HOM05D002833 ORTHO05D003210 5.3e-10 68.2 122 33.6
HanXRQChr06g0174021 Helianthus annuus HOM05D000002 ORTHO05D000001 9.0e-10 67.4 108 38.9
AUR62000049 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.2e-09 67.0 61 57.4
SpUn0139_0010 Schrenkiella parvula HOM05D002833 ORTHO05D003210 1.5e-09 66.6 102 34.3
ECA234G3301 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.4e-09 65.5 110 36.4
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-09 64.7 122 35.2
HanXRQChr10g0279441 Helianthus annuus HOM05D002833 ORTHO05D003210 7.6e-09 64.3 111 35.1
ECA247G1426 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.3e-08 63.5 79 40.5
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 1.7e-08 63.2 117 38.5
AUR62026133 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.7e-08 63.2 125 28.0
Thhalv10001107m.g Eutrema salsugineum HOM05D002833 ORTHO05D003210 1.7e-08 63.2 103 36.9
Sp1g32450 Schrenkiella parvula HOM05D002833 ORTHO05D003210 4.9e-08 61.6 113 31.0
Sopen12g010610 Solanum pennellii HOM05D002833 ORTHO05D019253 4.9e-08 61.6 77 40.3
TPR.G13748 Trifolium pratense HOM05D000002 ORTHO05D000001 4.9e-08 61.6 60 45.0
VMungo0464G1997 Vigna mungo HOM05D002833 ORTHO05D003210 4.9e-08 61.6 114 34.2
PSO170G0066 Papaver somniferum HOM05D002833 ORTHO05D003210 1.1e-07 60.5 119 29.4
ECA236G4004 Erigeron canadensis HOM05D000006 ORTHO05D003210 1.9e-07 59.7 102 35.3
TPR.G22413 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-07 59.3 71 40.8
Sopen11g011380 Solanum pennellii HOM05D002833 ORTHO05D003210 4.2e-07 58.5 49 49.0
Medtr7g015400 Medicago truncatula HOM05D039659 ORTHO05D003210 7.1e-07 57.8 78 35.9
AUR62001181 Chenopodium quinoa HOM05D002833 ORTHO05D003210 9.3e-07 57.4 74 41.9
THA.LOC109116033 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 9.3e-07 57.4 84 32.1
AUR62025263 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.2e-06 57.0 127 31.5
ECA238G3697 Erigeron canadensis HOM05D000214 ORTHO05D003210 2.1e-06 56.2 114 34.2
ECA240G2389 Erigeron canadensis HOM05D000002 ORTHO05D003210 2.1e-06 56.2 75 41.3
Medtr7g025300 Medicago truncatula HOM05D002833 ORTHO05D003210 2.7e-06 55.8 63 38.1
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.7e-06 55.8 117 34.2
Ah.08g221250 Amaranthus hybridus HOM05D002833 ORTHO05D003210 3.5e-06 55.5 81 37.0
AL431U10010 Arabidopsis lyrata HOM05D002833 ORTHO05D003210 3.5e-06 55.5 97 30.9
Sopen10g012450 Solanum pennellii HOM05D000006 ORTHO05D000001 3.5e-06 55.5 79 35.4


User provided reference genes

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