Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 4.6e-115 417.9 213 100.0
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 6.1e-75 284.6 214 72.0
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 1.8e-66 256.5 207 65.2
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.7e-64 250.0 131 96.9
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 5.0e-61 238.4 186 69.4
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 3.6e-51 205.7 195 58.5
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 3.0e-50 202.6 205 54.1
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.0e-49 199.9 204 52.9
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 2.8e-48 196.1 209 53.6
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 6.3e-48 194.9 201 54.2
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 8.2e-48 194.5 208 54.3
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 5.3e-47 191.8 196 52.6
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 2.7e-46 189.5 205 52.2
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 5.9e-46 188.3 200 52.0
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 1.0e-45 187.6 197 52.8
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 1.3e-45 187.2 200 52.5
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 2.9e-45 186.0 203 52.7
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 3.8e-45 185.7 201 53.2
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 8.5e-45 184.5 207 49.3
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.1e-44 184.1 194 51.5
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.5e-44 183.7 194 52.1
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.5e-44 183.7 187 54.0
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 1.9e-44 183.3 202 52.5
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 2.5e-44 183.0 210 50.0
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 2.5e-44 183.0 194 51.5
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 3.2e-44 182.6 210 48.6
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 5.5e-44 181.8 201 52.2
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 5.5e-44 181.8 172 55.8
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 7.2e-44 181.4 199 51.3
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.2e-43 180.6 229 48.5
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 2.7e-43 179.5 210 51.0
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 6.1e-43 178.3 204 50.0
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 6.1e-43 178.3 204 50.0
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 8.0e-43 177.9 216 47.2
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 8.0e-43 177.9 216 46.8
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 1.0e-42 177.6 205 50.7
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.3e-42 176.4 190 52.6
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 2.3e-42 176.4 216 46.3
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 3.0e-42 176.0 173 54.9
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 3.0e-42 176.0 212 48.6
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 3.0e-42 176.0 208 49.0
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 3.0e-42 176.0 221 48.0
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.0e-42 176.0 200 52.0
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 5.2e-42 175.3 221 46.2
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 6.8e-42 174.9 190 52.6
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 8.8e-42 174.5 217 47.5
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 1.2e-41 174.1 205 47.8
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.2e-41 174.1 197 51.3
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 1.2e-41 174.1 200 47.5
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 1.5e-41 173.7 207 48.8
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 1.5e-41 173.7 204 46.6
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 2.0e-41 173.3 206 50.0
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 2.0e-41 173.3 201 48.8
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 2.6e-41 172.9 181 51.9
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 3.4e-41 172.6 197 52.8
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.4e-41 172.6 205 50.2
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 9.8e-41 171.0 224 45.1
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 1.3e-40 170.6 205 49.8
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 2.2e-40 169.9 224 46.9
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 3.7e-40 169.1 195 51.3
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 4.8e-40 168.7 204 48.0
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 6.3e-40 168.3 216 45.8
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 8.3e-40 167.9 211 46.4
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 8.3e-40 167.9 195 48.2
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 1.1e-39 167.5 223 45.3
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 1.4e-39 167.2 206 49.5
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 1.4e-39 167.2 204 45.1
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 2.4e-39 166.4 188 47.9
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 4.1e-39 165.6 212 44.8
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 5.4e-39 165.2 210 46.7
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 1.2e-38 164.1 215 43.3
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 2.7e-38 162.9 181 50.3
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 1.3e-37 160.6 196 48.0
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 2.2e-37 159.8 188 51.6
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 1.1e-36 157.5 194 47.4
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 9.4e-36 154.5 206 45.1
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 3.6e-35 152.5 168 49.4
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 4.7e-35 152.1 168 51.2
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 6.1e-35 151.8 208 47.1
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 1.2e-33 147.5 174 50.6
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 1.5e-33 147.1 176 47.2
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 2.6e-33 146.4 151 51.7
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 7.5e-33 144.8 202 44.1
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 7.5e-33 144.8 171 50.9
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 6.3e-32 141.7 186 45.7
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 1.4e-31 140.6 158 51.3
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 1.6e-30 137.1 152 49.3
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 2.7e-30 136.3 179 43.6
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 3.8e-29 132.5 166 44.6
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 8.6e-29 131.3 184 44.0
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 1.1e-28 131.0 149 50.3
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 2.5e-28 129.8 153 47.7
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 3.3e-28 129.4 141 51.8
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 4.0e-26 122.5 222 39.2
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 8.9e-26 121.3 199 43.2
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 2.6e-25 119.8 166 42.2
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 5.7e-25 118.6 175 41.7
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 1.8e-23 113.6 183 41.5
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 9.2e-23 111.3 198 37.9
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 3.9e-21 105.9 155 39.4
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 4.7e-19 99.0 147 38.8
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 6.2e-19 98.6 143 42.0
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 2.2e-16 90.1 88 53.4
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 2.0e-14 83.6 104 47.1
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 3.3e-12 76.3 141 37.6
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.2e-11 74.3 90 51.1
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 8.1e-11 71.6 78 50.0
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 8.1e-11 71.6 78 50.0
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 1.1e-10 71.2 218 27.5
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 9.2e-07 58.2 77 44.2
SEGI_38065 Sequoiadendron giganteum HOM05D007009 ORTHO05D008451 3.5e-06 56.2 127 30.7
BcaB01g02975 Brassica carinata HOM05D020738 ORTHO05D008451 7.8e-06 55.1 79 40.5


User provided reference genes

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