Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026503 Chenopodium quinoa HOM05D001404 ORTHO05D009009 1.2e-132 476.5 230 100.0
AUR62026309 Chenopodium quinoa HOM05D001404 ORTHO05D009009 1.2e-60 237.3 224 59.4
EL10Ac6g13111 Beta vulgaris HOM05D001404 ORTHO05D009009 3.5e-44 182.6 178 55.1
Ciclev10031837m.g Citrus clementina HOM05D001404 ORTHO05D009009 6.2e-41 171.8 189 51.3
Hund25295 Selenicereus undatus HOM05D001404 ORTHO05D009009 1.4e-40 170.6 179 53.6
Sc14g0008480 Simmondsia chinensis HOM05D001355 ORTHO05D003368 4.0e-40 169.1 175 49.7
CiPaw.05G145400 Carya illinoinensis HOM05D001404 ORTHO05D009009 5.2e-40 168.7 180 52.8
Haze_12124 Corylus avellana HOM05D001404 ORTHO05D002309 8.9e-40 167.9 196 48.0
TAR374G0908 Trochodendron aralioides HOM05D001404 ORTHO05D009009 2.6e-39 166.4 197 48.2
AT1G70150 Arabidopsis thaliana HOM05D001404 ORTHO05D009009 4.4e-39 165.6 233 44.6
Sabra10G0028400 Salix brachista HOM05D001404 ORTHO05D009009 2.9e-38 162.9 180 49.4
Gorai.005G187100 Gossypium raimondii HOM05D001404 ORTHO05D009009 1.1e-37 161.0 178 48.3
Duzib268G0371 Durio zibethinus HOM05D001404 ORTHO05D009009 1.4e-37 160.6 177 48.6
Dinv24916 Davidia involucrata HOM05D001404 ORTHO05D009009 1.9e-37 160.2 187 48.1
Manes.01G195300 Manihot esculenta HOM05D001404 ORTHO05D009009 3.2e-37 159.5 173 51.4
BcaC08g46464 Brassica carinata HOM05D001404 ORTHO05D009009 5.4e-37 158.7 214 44.9
C06p44030 Brassica napus HOM05D001404 ORTHO05D009009 5.4e-37 158.7 214 44.9
BolC6t39476H Brassica oleracea HOM05D001404 ORTHO05D009009 5.4e-37 158.7 214 44.9
Thhalv10018717m.g Eutrema salsugineum HOM05D001404 ORTHO05D009009 9.2e-37 157.9 212 45.8
AL2G29430 Arabidopsis lyrata HOM05D001404 ORTHO05D009009 1.2e-36 157.5 232 41.8
Gohir.A03G143500 Gossypium hirsutum HOM05D001404 ORTHO05D009009 1.6e-36 157.1 178 47.2
Thecc.02G239700 Theobroma cacao HOM05D001404 ORTHO05D009009 1.6e-36 157.1 175 48.6
PSO161G0115 Papaver somniferum HOM05D001404 ORTHO05D009009 2.1e-36 156.8 181 49.7
RcHm_v2.0_Chr4g0444821 Rosa chinensis HOM05D001404 ORTHO05D009009 2.1e-36 156.8 175 50.3
Potri.010G037600 Populus trichocarpa HOM05D001404 ORTHO05D009009 2.7e-36 156.4 180 48.3
THA.LOC104822951 Tarenaya hassleriana HOM05D001404 ORTHO05D009009 2.7e-36 156.4 166 50.6
Aa31LG4G10750 Aethionema arabicum HOM05D001404 ORTHO05D009009 3.5e-36 156.0 259 39.8
Lj6A799T78 Lonicera japonica HOM05D001404 ORTHO05D009009 3.5e-36 156.0 179 48.6
TWI36G0457 Tripterygium wilfordii HOM05D001404 ORTHO05D009009 6.0e-36 155.2 179 46.9
FvH4_4g35220 Fragaria vesca HOM05D001404 ORTHO05D009009 7.8e-36 154.8 175 49.7
FAN12G1952 Fragaria x ananassa HOM05D001404 ORTHO05D009009 7.8e-36 154.8 175 49.7
A07p36630 Brassica napus HOM05D001404 ORTHO05D009009 1.3e-35 154.1 172 50.0
BraA07t31231Z Brassica rapa HOM05D001404 ORTHO05D009009 1.3e-35 154.1 172 50.0
CARHR063240 Cardamine hirsuta HOM05D001404 ORTHO05D002309 1.3e-35 154.1 211 44.5
CsaV3_5G031930 Cucumis sativus L. HOM05D001404 ORTHO05D009009 1.7e-35 153.7 170 46.5
GSVIVG01020147001 Vitis vinifera HOM05D001404 ORTHO05D009009 1.7e-35 153.7 187 44.9
Cpa.g.sc1960.1 Carica papaya HOM05D001404 ORTHO05D009009 3.0e-35 152.9 180 48.3
Sp5g25260 Schrenkiella parvula HOM05D001404 ORTHO05D009009 3.0e-35 152.9 182 47.3
QL03p067270 Quercus lobata HOM05D001404 ORTHO05D009009 3.9e-35 152.5 176 46.6
Carub.0002s1684 Capsella rubella HOM05D001404 ORTHO05D009009 6.6e-35 151.8 181 47.0
FAN22G1682 Fragaria x ananassa HOM05D001404 ORTHO05D009009 6.6e-35 151.8 179 50.8
FAN07G0845 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.5e-34 150.6 179 49.7
Lalb_Chr05g0217271 Lupinus albus HOM05D001404 ORTHO05D009009 1.5e-34 150.6 176 50.0
COL.COLO4_36283 Corchorus olitorius HOM05D001404 ORTHO05D002309 3.3e-34 149.4 177 45.8
PGR119G0405 Punica granatum HOM05D001404 ORTHO05D009009 7.3e-34 148.3 176 46.0
Phvul.002G076800 Phaseolus vulgaris HOM05D001404 ORTHO05D009009 1.6e-33 147.1 172 48.3
Rhsim12G0051800 Rhododendron simsii HOM05D001404 ORTHO05D009009 1.6e-33 147.1 191 44.0
Solyc05g006410.3 Solanum lycopersicum HOM05D001404 ORTHO05D009009 1.6e-33 147.1 178 45.5
VMungo1215G3058 Vigna mungo HOM05D001404 ORTHO05D009009 1.6e-33 147.1 177 49.7
Sopen05g002340 Solanum pennellii HOM05D001404 ORTHO05D009009 2.1e-33 146.7 177 45.8
CSS0043132 Camellia sinensis var. sinensis HOM05D001404 ORTHO05D002309 2.8e-33 146.4 192 45.3
Prupe.1G261400 Prunus persica HOM05D001404 ORTHO05D009009 2.8e-33 146.4 199 43.7
Eucgr.B02570 Eucalyptus grandis HOM05D001404 ORTHO05D009009 3.6e-33 146.0 202 42.1
CANSAT01G0136 Cannabis sativa HOM05D001404 ORTHO05D009009 8.1e-33 144.8 175 48.6
Cc11_g14260 Coffea canephora HOM05D001404 ORTHO05D009009 1.1e-32 144.4 170 47.6
Glyma.01G037400 Glycine max HOM05D001404 ORTHO05D009009 1.4e-32 144.1 188 46.3
MD16G1084700 Malus domestica HOM05D001404 ORTHO05D009009 1.4e-32 144.1 181 45.3
Actinidia08188 Actinidia chinensis HOM05D001404 ORTHO05D009009 2.4e-32 143.3 188 45.2
Sed0021588 Sechium edule HOM05D001404 ORTHO05D009009 2.4e-32 143.3 198 42.9
arahy.Tifrunner.gnm1.ann1.2TJ8DU Arachis hypogaea HOM05D001404 ORTHO05D009009 4.0e-32 142.5 179 45.8
Aqoxy3G00874 Aquilegia oxysepala HOM05D001404 ORTHO05D009009 5.2e-32 142.1 168 45.2
Lj2g0007192 Lotus japonicus HOM05D001404 ORTHO05D009009 6.8e-32 141.7 179 46.4
PGSC0003DMG401022613 Solanum tuberosum HOM05D001404 ORTHO05D009009 6.8e-32 141.7 177 45.2
ECA234G1431 Erigeron canadensis HOM05D001404 ORTHO05D002309 2.0e-31 140.2 174 46.0
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 2.6e-31 139.8 242 38.4
vmacro01204 Vaccinium macrocarpon HOM05D001404 ORTHO05D009009 2.6e-31 139.8 186 44.1
Ca_24163_v3 Cicer arietinum L. HOM05D001404 ORTHO05D002309 5.8e-31 138.7 179 48.0
SalBow2G3155 Salvia bowleyana HOM05D001404 ORTHO05D009009 9.9e-31 137.9 173 46.2
SalBow2G3257 Salvia bowleyana HOM05D001404 ORTHO05D009009 9.9e-31 137.9 173 46.2
MSTRG.7858 Avicennia marina HOM05D001404 ORTHO05D009009 1.3e-30 137.5 183 43.7
HanXRQChr17g0570291 Helianthus annuus HOM05D001404 ORTHO05D009009 2.9e-30 136.3 174 47.7
Nitab4.5_0003602g0020 Nicotiana tabacum HOM05D001404 ORTHO05D009009 2.9e-30 136.3 177 45.8
CAN.G159.8 Capsicum annuum HOM05D001404 ORTHO05D009009 4.9e-30 135.6 177 44.6
Psat2g112600 Pisum sativum HOM05D001404 ORTHO05D009009 1.1e-29 134.4 173 43.4
CDE10G0936 Ceratophyllum demersum HOM05D001404 ORTHO05D009009 4.2e-29 132.5 168 42.3
Oeu028546.1 Olea europaea HOM05D001404 ORTHO05D009009 5.4e-29 132.1 197 40.1
Medtr5g036470 Medicago truncatula HOM05D001404 ORTHO05D009009 9.2e-29 131.3 172 44.2
arahy.Tifrunner.gnm1.ann1.VUK41S Arachis hypogaea HOM05D001404 ORTHO05D009009 7.8e-28 128.3 164 43.9
SGA_v2.0_scaffold8G04270 Striga asiatica HOM05D001404 ORTHO05D009009 1.1e-26 124.4 178 42.7
Lsat_1_v5_gn_4_6141 Lactuca sativa HOM05D001404 ORTHO05D009009 4.3e-26 122.5 175 44.6
Migut.L01385 Erythranthe guttata HOM05D001404 ORTHO05D009009 7.3e-26 121.7 174 39.7
Peaxi162Scf00828g00020 Petunia axillaris HOM05D001404 ORTHO05D009009 1.4e-24 117.5 168 38.7
Zm00001eb321400 Zea mays HOM05D001404 ORTHO05D009009 9.0e-24 114.8 180 41.1
ATR0712G115 Amborella trichopoda HOM05D001404 ORTHO05D009009 1.5e-23 114.0 72 70.8
AagrBONN_evm.TU.Sc2ySwM_368.625 Anthoceros agrestis HOM05D001404 ORTHO05D009009 3.4e-23 112.8 192 38.5
TPR.G17205 Trifolium pratense HOM05D001404 ORTHO05D009009 9.9e-23 111.3 76 65.8
Os07g0481000 Oryza sativa ssp. japonica HOM05D001404 ORTHO05D009009 2.2e-22 110.2 178 38.2
Mapoly0056s0134 Marchantia polymorpha HOM05D001404 ORTHO05D009009 1.2e-20 104.4 169 38.5
unitig_749.g13260 Utricularia gibba HOM05D001404 ORTHO05D009009 3.5e-20 102.8 83 60.2
Nn4g22934 Nelumbo nucifera HOM05D001404 ORTHO05D009009 4.6e-20 102.4 180 37.2
Lj4g0012021 Lotus japonicus HOM05D001404 ORTHO05D009009 7.8e-20 101.7 73 60.3
ClCG05G024960 Citrullus lanatus HOM05D001404 ORTHO05D009009 3.3e-18 96.3 141 38.3
SalBow2G0480 Salvia bowleyana HOM05D001404 ORTHO05D009009 3.6e-17 92.8 67 64.2
Pp3c9_21180 Physcomitrium patens HOM05D001404 ORTHO05D009009 1.2e-15 87.8 180 30.6
SMO091G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 3.8e-14 82.8 173 34.1
SMO238G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 1.6e-12 77.4 184 34.8
Nitab4.5_0002312g0090 Nicotiana tabacum HOM05D001404 ORTHO05D009009 2.1e-09 67.0 126 38.1
FAN17G2278 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.1e-08 64.7 41 68.3
MELO3C012030.2 Cucumis melo HOM05D001404 ORTHO05D009009 5.3e-08 62.4 35 74.3
Atru.chr11.1937 Acer truncatum HOM05D001404 ORTHO05D002309 1.5e-07 60.8 116 37.1
Gohir.D02G166800 Gossypium hirsutum HOM05D001404 ORTHO05D009009 3.8e-06 56.2 37 59.5
MD13G1085400 Malus domestica HOM05D001404 ORTHO05D009009 3.8e-06 56.2 39 69.2
Duzib251G0488 Durio zibethinus HOM05D001404 ORTHO05D009009 4.9e-06 55.8 38 63.2


User provided reference genes

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