Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026305 Chenopodium quinoa HOM05D000003 ORTHO05D000006 3.9e-87 324.7 156 100.0
AUR62029848 Chenopodium quinoa HOM05D000003 ORTHO05D000006 8.2e-29 131.0 155 45.8
AUR62037956 Chenopodium quinoa HOM05D000003 ORTHO05D000006 6.1e-24 114.8 87 62.1
AUR62013845 Chenopodium quinoa HOM05D000003 ORTHO05D000006 5.0e-18 95.1 79 59.5
AUR62024306 Chenopodium quinoa HOM05D000003 ORTHO05D000006 4.7e-16 88.6 89 47.2
AUR62044666 Chenopodium quinoa HOM05D000003 ORTHO05D000006 4.7e-16 88.6 89 47.2
AUR62013846 Chenopodium quinoa HOM05D000003 ORTHO05D000006 1.0e-15 87.4 61 67.2
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-12 75.1 119 36.1
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.1e-12 74.3 119 36.1
COL.COLO4_10353 Corchorus olitorius HOM05D000003 ORTHO05D000006 2.0e-11 73.2 142 33.1
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.5e-11 72.4 110 38.2
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-10 69.7 118 33.1
Sabra09G0015300 Salix brachista HOM05D000003 ORTHO05D000006 5.0e-10 68.6 164 30.5
TWI38G1591 Tripterygium wilfordii HOM05D000003 ORTHO05D000006 1.1e-09 67.4 72 45.8
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-09 66.6 119 32.8
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.9e-09 66.6 78 44.9
CSS0015694 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-09 65.9 114 31.6
Cpa.g.sc263.17 Carica papaya HOM05D000003 ORTHO05D000006 5.5e-09 65.1 71 43.7
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.2e-09 64.7 73 43.8
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 9.4e-09 64.3 68 47.1
Atru.chr9.1348 Acer truncatum HOM05D000003 ORTHO05D000006 9.4e-09 64.3 157 29.9
PSO170G6756 Papaver somniferum HOM05D000003 ORTHO05D000006 9.4e-09 64.3 77 41.6
Atru.chr6.1035 Acer truncatum HOM05D000024 ORTHO05D000006 1.2e-08 63.9 68 44.1
CANSAT21G2014 Cannabis sativa HOM05D000003 ORTHO05D000006 1.2e-08 63.9 82 39.0
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-08 63.2 117 32.5
CSS0042649 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-08 62.8 112 32.1
Sabra15G0085100 Salix brachista HOM05D000003 ORTHO05D000006 3.6e-08 62.4 68 41.2
PSO170G2813 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-08 62.0 125 32.0
Sabra02G0135700 Salix brachista HOM05D000003 ORTHO05D000006 4.7e-08 62.0 105 36.2
Sabra08G0134900 Salix brachista HOM05D000003 ORTHO05D000006 4.7e-08 62.0 105 36.2
CANSAT01G3039 Cannabis sativa HOM05D000003 ORTHO05D000006 6.1e-08 61.6 82 37.8
PSO063G6643 Papaver somniferum HOM05D000003 ORTHO05D000006 6.1e-08 61.6 122 30.3
PSO339G1594 Papaver somniferum HOM05D000003 ORTHO05D000006 8.0e-08 61.2 77 39.0
Atru.chr4.30 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 60.8 76 43.4
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-07 60.8 68 44.1
Atru.chr7.256 Acer truncatum HOM05D000003 ORTHO05D000006 1.0e-07 60.8 68 44.1
Thecc.03G216200 Theobroma cacao HOM05D000003 ORTHO05D000006 1.0e-07 60.8 74 37.8
CSS0013517 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-07 60.5 113 32.7
CSS0036111 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 1.4e-07 60.5 54 50.0
FvH4_7g03341 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-07 60.5 168 24.4
Atru.chr12.664 Acer truncatum HOM05D000003 ORTHO05D000006 1.8e-07 60.1 132 31.8
CSS0003391 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.8e-07 60.1 54 51.9
TPR.G28475 Trifolium pratense HOM05D000003 ORTHO05D000006 1.8e-07 60.1 110 35.5
Atru.chr8.1059 Acer truncatum HOM05D000024 ORTHO05D000006 2.3e-07 59.7 68 44.1
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-07 59.7 82 36.6
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-07 59.3 105 34.3
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 59.3 82 36.6
PGR044G0962 Punica granatum HOM05D000024 ORTHO05D000006 3.0e-07 59.3 70 41.4
CANSAT11G0839 Cannabis sativa HOM05D000003 ORTHO05D000006 4.0e-07 58.9 73 41.1
Actinidia10466 Actinidia chinensis HOM05D000003 ORTHO05D000006 5.2e-07 58.5 72 37.5
CSS0040821 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 5.2e-07 58.5 54 46.3
PSO063G4704 Papaver somniferum HOM05D000003 ORTHO05D000006 5.2e-07 58.5 68 41.2
PSO210G3844 Papaver somniferum HOM05D000024 ORTHO05D000006 5.2e-07 58.5 77 40.3
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-07 58.2 68 38.2
EL10Ac1g01973 Beta vulgaris HOM05D000575 ORTHO05D000006 6.7e-07 58.2 70 42.9
CSS0037685 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.7e-07 58.2 53 49.1
Gohir.D02G130301 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.7e-07 58.2 109 35.8
PSO063G3131 Papaver somniferum HOM05D000003 ORTHO05D000006 6.7e-07 58.2 75 41.3
QL01p004841 Quercus lobata HOM05D000003 ORTHO05D000006 6.7e-07 58.2 74 39.2
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-07 57.8 68 42.6
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-07 57.8 68 41.2
PSO478G2249 Papaver somniferum HOM05D000003 ORTHO05D000006 8.8e-07 57.8 91 31.9
PGR092G0007 Punica granatum HOM05D000003 ORTHO05D000006 8.8e-07 57.8 74 35.1
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-06 57.4 68 41.2
Atru.chr13.1144 Acer truncatum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 64 46.9
Atru.chr13.2319 Acer truncatum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 68 41.2
EL10Ac8g19110 Beta vulgaris HOM05D000003 ORTHO05D000004 1.2e-06 57.4 84 36.9
CSS0021766 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-06 57.4 107 32.7
AUR62016914 Chenopodium quinoa HOM05D000003 ORTHO05D000006 1.2e-06 57.4 79 39.2
PSO478G3848 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 125 35.2
TPR.G11139 Trifolium pratense HOM05D000003 ORTHO05D000007 1.2e-06 57.4 72 40.3
CSS0037998 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 1.5e-06 57.0 118 31.4
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 57.0 82 35.4
PSO063G2037 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-06 57.0 81 39.5
QL03p012384 Quercus lobata HOM05D000003 ORTHO05D000006 1.5e-06 57.0 74 32.4
Atru.chr5.3511 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-06 56.6 71 40.8
MBI02_g01138_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000006 2.0e-06 56.6 72 40.3
Atru.chr2.1277 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 56.2 64 40.6
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 69 40.6
Atru.chr9.1445 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 56.2 72 40.3
COL.COLO4_27142 Corchorus olitorius HOM05D000003 ORTHO05D000006 2.6e-06 56.2 70 40.0
Gohir.D07G167050 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.6e-06 56.2 75 40.0
PGR044G0082 Punica granatum HOM05D000003 ORTHO05D000006 2.6e-06 56.2 71 40.8
PGR102G1324 Punica granatum HOM05D000003 ORTHO05D000006 2.6e-06 56.2 82 34.1
RcHm_v2.0_Chr2g0146151 Rosa chinensis HOM05D000003 ORTHO05D000006 2.6e-06 56.2 134 28.4
TPR.G35113 Trifolium pratense HOM05D000003 ORTHO05D000006 2.6e-06 56.2 78 39.7
Atru.chr9.814 Acer truncatum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 98 33.7
EL10Ac2g03044 Beta vulgaris HOM05D000003 ORTHO05D000006 3.3e-06 55.8 88 39.8
CSS0042775 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 3.3e-06 55.8 54 46.3
AUR62019956 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.3e-06 55.8 73 43.8
PSO170G2477 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 69 39.1
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-06 55.5 68 41.2
AUR62039640 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.4e-06 55.5 73 42.5
Duzib192G0668 Durio zibethinus HOM05D000003 ORTHO05D000006 4.4e-06 55.5 80 36.2
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 4.4e-06 55.5 167 28.1
TAR090G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 4.4e-06 55.5 69 42.0
Atru.chr13.1165 Acer truncatum HOM05D000003 ORTHO05D000006 5.7e-06 55.1 68 44.1
EL10Ac5g11644 Beta vulgaris HOM05D000003 ORTHO05D000006 5.7e-06 55.1 95 38.9
Manes.16G093425 Manihot esculenta HOM05D000024 ORTHO05D000006 5.7e-06 55.1 82 34.1
TPR.G7953 Trifolium pratense HOM05D000003 ORTHO05D000004 5.7e-06 55.1 75 42.7
CANSAT35G1327 Cannabis sativa HOM05D000003 ORTHO05D000006 7.5e-06 54.7 74 39.2
AUR62027487 Chenopodium quinoa HOM05D000003 ORTHO05D000006 7.5e-06 54.7 62 46.8
TPR.G10050 Trifolium pratense HOM05D000003 ORTHO05D000006 7.5e-06 54.7 72 40.3
TPR.G39606 Trifolium pratense HOM05D000003 ORTHO05D000004 7.5e-06 54.7 187 25.7
CSS0024280 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.7e-06 54.3 54 44.4
PSO478G1359 Papaver somniferum HOM05D000003 ORTHO05D000006 9.7e-06 54.3 75 38.7


User provided reference genes

Program Settings