Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 9.0e-202 706.8 390 100.0
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 4.4e-148 528.5 363 85.4
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 5.5e-98 362.1 377 62.3
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 1.4e-82 310.8 404 51.2
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 9.4e-82 308.1 405 50.6
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 7.4e-79 298.5 400 49.5
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 6.9e-77 292.0 458 47.2
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 9.1e-77 291.6 394 48.7
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 2.9e-75 286.6 277 57.8
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 4.7e-73 279.3 397 48.6
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 8.8e-72 275.0 363 50.7
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 2.0e-71 273.9 413 46.7
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 2.6e-71 273.5 277 59.2
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 1.1e-69 268.1 401 45.4
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 3.1e-69 266.5 229 66.8
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 5.3e-69 265.8 277 56.7
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 2.2e-67 260.4 314 49.7
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 5.0e-67 259.2 406 44.8
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 5.0e-67 259.2 277 54.9
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 5.5e-66 255.8 406 45.1
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 7.2e-66 255.4 412 44.9
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 7.2e-66 255.4 276 55.4
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 4.7e-65 252.7 405 44.7
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 2.3e-64 250.4 227 62.1
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 5.2e-64 249.2 277 54.5
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 4.4e-63 246.1 352 46.0
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 6.3e-62 242.3 401 43.1
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 2.4e-61 240.4 277 53.1
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.6e-60 237.7 391 42.7
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 8.5e-59 231.9 300 48.3
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 8.5e-59 231.9 266 51.9
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 1.1e-58 231.5 276 49.3
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 1.1e-58 231.5 423 42.6
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 1.9e-58 230.7 276 50.0
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 2.5e-58 230.3 443 40.0
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 2.3e-56 223.8 440 38.2
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 3.0e-56 223.4 229 56.8
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 9.8e-55 218.4 376 40.4
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 9.8e-55 218.4 312 46.2
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.3e-54 218.0 347 43.2
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 3.7e-54 216.5 271 48.7
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 3.7e-54 216.5 288 49.0
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 8.3e-54 215.3 288 48.6
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 3.5e-52 209.9 293 46.1
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 7.7e-52 208.8 401 40.9
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 1.0e-51 208.4 409 38.1
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 2.9e-51 206.8 252 50.0
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 1.0e-48 198.4 272 46.3
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 1.4e-48 198.0 167 65.3
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 5.2e-48 196.1 361 38.8
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 1.5e-47 194.5 389 40.9
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 1.5e-47 194.5 167 66.5
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 1.5e-47 194.5 401 40.1
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 2.0e-47 194.1 361 39.1
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 3.4e-47 193.4 406 38.9
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 8.3e-46 188.7 272 45.6
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 1.4e-45 188.0 443 37.2
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 2.0e-44 184.1 287 42.2
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 5.9e-44 182.6 156 66.0
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 1.3e-43 181.4 176 60.8
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 2.9e-43 180.3 408 37.5
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 2.1e-41 174.1 275 40.7
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 1.8e-40 171.0 187 52.9
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 1.5e-39 167.9 247 46.2
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 2.0e-39 167.5 277 42.2
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 2.9e-38 163.7 169 54.4
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 1.6e-36 157.9 109 81.7
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 3.3e-34 150.2 129 62.8
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 7.3e-34 149.1 432 31.5
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 5.4e-29 132.9 248 36.3
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 7.3e-26 122.5 228 39.0
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 7.3e-26 122.5 111 57.7
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 6.4e-22 109.4 163 42.3
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 6.4e-22 109.4 115 58.3
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 2.1e-17 94.4 121 45.5
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 1.4e-16 91.7 161 35.4
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 3.5e-12 77.0 73 64.4
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 6.0e-12 76.3 297 24.6
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 1.0e-11 75.5 187 26.7
CDE07G1947 Ceratophyllum demersum HOM05D007593 ORTHO05D009686 3.3e-10 70.5 132 36.4
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 3.3e-10 70.5 64 60.9
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 2.4e-08 64.3 85 47.1
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 5.2e-08 63.2 277 27.8
Sc04g0008650 Simmondsia chinensis HOM05D007593 ORTHO05D009686 1.5e-07 61.6 161 34.8
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 3.4e-07 60.5 118 42.4
RcHm_v2.0_Chr4g0445121 Rosa chinensis HOM05D007593 ORTHO05D009686 5.8e-07 59.7 179 28.5
Hund25290 Selenicereus undatus HOM05D007593 ORTHO05D009686 7.6e-07 59.3 137 37.2
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 9.9e-07 58.9 59 61.0


User provided reference genes

Program Settings