Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026186 Chenopodium quinoa HOM05D065288 ORTHO05D000365 2.8e-160 568.5 283 100.0
AUR62028435 Chenopodium quinoa HOM05D065288 ORTHO05D000365 1.8e-95 353.2 284 69.4
AUR62001913 Chenopodium quinoa HOM05D000627 ORTHO05D000365 3.4e-73 279.3 173 86.1
AUR62003896 Chenopodium quinoa HOM05D000627 ORTHO05D000365 2.4e-71 273.1 173 85.0
EL10Ac6g15728 Beta vulgaris HOM05D000627 ORTHO05D000365 5.4e-47 192.2 170 65.9
Ah.03g145510 Amaranthus hybridus HOM05D000627 ORTHO05D000365 5.6e-28 129.0 176 49.4
Hund13544 Selenicereus undatus HOM05D000627 ORTHO05D000365 1.7e-16 90.9 94 48.9
AUR62011781 Chenopodium quinoa HOM05D003528 ORTHO05D004548 4.6e-14 82.8 38 94.7
AUR62024625 Chenopodium quinoa HOM05D003528 ORTHO05D004548 4.6e-14 82.8 38 94.7
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 4.6e-14 82.8 42 92.9
Ah.02g112380 Amaranthus hybridus HOM05D003528 ORTHO05D004548 3.0e-13 80.1 38 89.5
Duzib187G0566 Durio zibethinus HOM05D000627 ORTHO05D000365 5.1e-13 79.3 143 42.7
Sc03g0001690 Simmondsia chinensis HOM05D000627 ORTHO05D000365 1.1e-12 78.2 139 39.6
GSVIVG01022111001 Vitis vinifera HOM05D000627 ORTHO05D000365 1.5e-12 77.8 178 37.1
EL10As5g23551 Beta vulgaris HOM05D003528 ORTHO05D004548 7.4e-12 75.5 37 86.5
Sc24g0004210 Simmondsia chinensis HOM05D003528 ORTHO05D004548 2.2e-11 73.9 38 78.9
Gohir.A11G193400 Gossypium hirsutum HOM05D000627 ORTHO05D000365 3.7e-11 73.2 95 50.5
Gohir.D11G200500 Gossypium hirsutum HOM05D000627 ORTHO05D000365 3.7e-11 73.2 139 43.2
Dinv26837 Davidia involucrata HOM05D000627 ORTHO05D000365 4.8e-11 72.8 135 40.0
Gorai.007G214800 Gossypium raimondii HOM05D000627 ORTHO05D000365 8.2e-11 72.0 140 43.6
Duzib264G1235 Durio zibethinus HOM05D000627 ORTHO05D000365 1.1e-10 71.6 188 34.0
Prupe.7G131400 Prunus persica HOM05D000627 ORTHO05D000365 1.8e-10 70.9 135 42.2
Manes.12G104100 Manihot esculenta HOM05D000627 ORTHO05D000365 2.4e-10 70.5 159 37.7
Dinv30001 Davidia involucrata HOM05D000627 ORTHO05D000365 3.1e-10 70.1 134 40.3
VMungo1215G0727 Vigna mungo HOM05D000627 ORTHO05D000365 6.9e-10 68.9 97 43.3
Duzib147G1372 Durio zibethinus HOM05D000627 ORTHO05D000365 9.1e-10 68.6 174 35.1
Ah.11g049180 Amaranthus hybridus HOM05D003528 ORTHO05D004548 1.5e-09 67.8 34 85.3
Thecc.01G058800 Theobroma cacao HOM05D000627 ORTHO05D000365 1.5e-09 67.8 141 41.8
RcHm_v2.0_Chr2g0105931 Rosa chinensis HOM05D000627 ORTHO05D000365 2.0e-09 67.4 179 37.4
Hma1.2p1_0909F.1_g235800 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 2.6e-09 67.0 181 33.1
Sabra14G0017700 Salix brachista HOM05D000627 ORTHO05D000365 2.6e-09 67.0 138 34.8
Cfa004034 Carpinus fangiana HOM05D003103 ORTHO05D003999 4.5e-09 66.2 170 35.9
Potri.014G025800 Populus trichocarpa HOM05D000627 ORTHO05D000365 4.5e-09 66.2 137 35.8
Haze_15379 Corylus avellana HOM05D000627 ORTHO05D000365 5.9e-09 65.9 167 35.3
Lalb_Chr09g0323261 Lupinus albus HOM05D000627 ORTHO05D000365 1.0e-08 65.1 134 38.1
Ca_24757_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 1.7e-08 64.3 97 42.3
CSS0018951 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 3.8e-08 63.2 90 45.6
CSS0008776 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 5.0e-08 62.8 95 44.2
Potri.002G124400 Populus trichocarpa HOM05D000627 ORTHO05D000365 5.0e-08 62.8 138 35.5
Ciclev10025735m.g Citrus clementina HOM05D000627 ORTHO05D000365 6.5e-08 62.4 147 35.4
COL.COLO4_11443 Corchorus olitorius HOM05D000627 ORTHO05D000365 8.5e-08 62.0 167 34.1
FvH4_1g16230 Fragaria vesca HOM05D000627 ORTHO05D000365 8.5e-08 62.0 179 36.3
Manes.18G039601 Manihot esculenta HOM05D000627 ORTHO05D000365 8.5e-08 62.0 113 37.2
Nn5g30344 Nelumbo nucifera HOM05D000627 ORTHO05D000365 1.4e-07 61.2 98 44.9
Psat2g166760 Pisum sativum HOM05D000627 ORTHO05D000365 1.9e-07 60.8 100 40.0
Thecc.08G003800 Theobroma cacao HOM05D000627 ORTHO05D000365 1.9e-07 60.8 100 44.0
TWI09G1501 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 1.9e-07 60.8 136 34.6
Duzib041G0344 Durio zibethinus HOM05D000627 ORTHO05D000365 2.5e-07 60.5 94 41.5
Nn3g21722 Nelumbo nucifera HOM05D003528 ORTHO05D004548 3.2e-07 60.1 47 55.3
Cpa.g.sc55.132 Carica papaya HOM05D000627 ORTHO05D000365 4.2e-07 59.7 134 38.1
CiPaw.01G016500 Carya illinoinensis HOM05D000627 ORTHO05D000365 4.2e-07 59.7 183 31.7
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 4.2e-07 59.7 37 67.6
Eucgr.I00906 Eucalyptus grandis HOM05D000627 ORTHO05D000365 4.2e-07 59.7 95 44.2
Glyma.01G187600 Glycine max HOM05D000627 ORTHO05D000365 4.2e-07 59.7 96 41.7
Thecc.01G315300 Theobroma cacao HOM05D003528 ORTHO05D004548 4.2e-07 59.7 37 70.3
TAR365G0306 Trochodendron aralioides HOM05D003528 ORTHO05D004548 4.2e-07 59.7 35 74.3
VMungo0251G3455 Vigna mungo HOM05D000627 ORTHO05D000365 4.2e-07 59.7 170 32.9
CANSAT01G2532 Cannabis sativa HOM05D000627 ORTHO05D000365 5.5e-07 59.3 169 34.9
Cc01_g21560 Coffea canephora HOM05D003528 ORTHO05D004548 5.5e-07 59.3 37 64.9
FAN26G2157 Fragaria x ananassa HOM05D000627 ORTHO05D000365 5.5e-07 59.3 180 35.0
Lalb_Chr16g0378581 Lupinus albus HOM05D000627 ORTHO05D000365 5.5e-07 59.3 180 32.8
MD02G1174600 Malus domestica HOM05D000627 ORTHO05D000365 5.5e-07 59.3 141 36.9
SalBow3G0973 Salvia bowleyana HOM05D003528 ORTHO05D004548 5.5e-07 59.3 44 59.1
QL06p040949 Quercus lobata HOM05D000627 ORTHO05D000365 7.2e-07 58.9 134 35.8
CiPaw.07G118800 Carya illinoinensis HOM05D003528 ORTHO05D004548 9.4e-07 58.5 35 68.6
Atru.chr3.304 Acer truncatum HOM05D000627 ORTHO05D000365 1.2e-06 58.2 136 34.6
Oeu008478.1 Olea europaea HOM05D003528 ORTHO05D004548 1.2e-06 58.2 37 67.6
Potri.002G194250 Populus trichocarpa HOM05D003528 ORTHO05D004548 1.2e-06 58.2 35 68.6
TWI56G0004 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 1.2e-06 58.2 112 38.4
TAR636G0526 Trochodendron aralioides HOM05D003528 ORTHO05D004548 1.2e-06 58.2 36 69.4
MELO3C010843.2 Cucumis melo HOM05D000627 ORTHO05D000365 1.6e-06 57.8 98 42.9
PSO170G4786 Papaver somniferum HOM05D003528 ORTHO05D004548 1.6e-06 57.8 40 60.0
PSO357G0466 Papaver somniferum HOM05D003528 ORTHO05D004548 1.6e-06 57.8 40 60.0
Migut.D00072 Erythranthe guttata HOM05D003528 ORTHO05D004548 2.1e-06 57.4 37 64.9
FAN23G0049 Fragaria x ananassa HOM05D003103 ORTHO05D003999 2.1e-06 57.4 163 34.4
Gohir.D05G207200 Gossypium hirsutum HOM05D000627 ORTHO05D000365 2.1e-06 57.4 100 42.0
Gorai.009G213800 Gossypium raimondii HOM05D000627 ORTHO05D000365 2.1e-06 57.4 100 42.0
Aqoxy5G01196 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 2.7e-06 57.0 100 37.0
Ciclev10022021m.g Citrus clementina HOM05D003528 ORTHO05D004548 2.7e-06 57.0 46 54.3
DCAR_018287 Daucus carota HOM05D003528 ORTHO05D004548 2.7e-06 57.0 39 66.7
Phvul.003G242900 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 2.7e-06 57.0 170 32.9
MSTRG.18092 Avicennia marina HOM05D003528 ORTHO05D004548 3.6e-06 56.6 41 58.5
COL.COLO4_23215 Corchorus olitorius HOM05D003528 ORTHO05D004548 3.6e-06 56.6 37 64.9
FAN28G2570 Fragaria x ananassa HOM05D000627 ORTHO05D000365 3.6e-06 56.6 131 40.5
Gohir.A08G040200 Gossypium hirsutum HOM05D003528 ORTHO05D004548 3.6e-06 56.6 37 67.6
Gohir.D08G050300 Gossypium hirsutum HOM05D003528 ORTHO05D004548 3.6e-06 56.6 37 67.6
Gorai.004G049900 Gossypium raimondii HOM05D003528 ORTHO05D004548 3.6e-06 56.6 37 67.6
Sc17g0000400 Simmondsia chinensis HOM05D003528 ORTHO05D004548 3.6e-06 56.6 38 63.2
ClCG08G016090 Citrullus lanatus HOM05D000627 ORTHO05D000365 4.7e-06 56.2 98 42.9
FAN19G1420 Fragaria x ananassa HOM05D000627 ORTHO05D000365 4.7e-06 56.2 161 35.4
Oeu049917.2 Olea europaea HOM05D003528 ORTHO05D004548 4.7e-06 56.2 35 65.7
CsaV3_2G026540 Cucumis sativus L. HOM05D000627 ORTHO05D000365 6.1e-06 55.8 98 41.8
Duzib138G1299 Durio zibethinus HOM05D003528 ORTHO05D004548 6.1e-06 55.8 37 64.9
MBI16_g29820_MAGBIO Magnolia biondii HOM05D003528 ORTHO05D004548 6.1e-06 55.8 36 63.9
vmacro17958 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 6.1e-06 55.8 130 36.9
Phvul.002G017600 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 7.9e-06 55.5 86 43.0
SGA_v2.0_scaffold334G49078 Striga asiatica HOM05D003528 ORTHO05D004548 7.9e-06 55.5 37 62.2


User provided reference genes

Program Settings