Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 0.0e+00 1276.2 654 100.0
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 0.0e+00 1122.8 654 89.6
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 2.3e-250 869.0 668 70.4
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 8.6e-205 717.6 693 57.7
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 9.5e-204 714.1 688 58.3
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 3.9e-157 559.3 697 48.1
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 1.9e-156 557.0 698 49.0
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 5.6e-156 555.4 705 47.5
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 6.2e-155 552.0 679 48.7
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 6.9e-154 548.5 708 47.2
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 3.4e-153 546.2 687 48.3
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 4.5e-153 545.8 671 48.9
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 1.0e-152 544.7 687 47.7
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 3.8e-152 542.7 695 47.3
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 8.4e-152 541.6 707 47.1
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 1.9e-151 540.4 693 48.3
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 3.2e-151 539.7 698 47.4
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 4.2e-151 539.3 640 50.0
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 5.5e-151 538.9 694 47.6
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 2.1e-150 537.0 691 47.6
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 7.9e-150 535.0 701 45.6
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 3.9e-149 532.7 671 48.1
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 4.3e-148 529.3 692 45.2
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 1.3e-147 527.7 675 47.0
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 1.8e-146 523.9 667 47.1
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.8e-146 523.9 681 46.4
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 2.4e-146 523.5 716 45.1
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 3.1e-146 523.1 681 47.0
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 4.1e-146 522.7 704 45.3
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 1.2e-145 521.2 717 45.6
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 1.2e-145 521.2 716 45.8
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 4.5e-145 519.2 603 49.3
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.3e-144 517.7 667 45.9
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 1.7e-144 517.3 726 42.8
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 1.4e-143 514.2 697 45.1
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 5.5e-143 512.3 674 44.8
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 9.3e-143 511.5 673 46.1
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 1.6e-142 510.8 659 46.4
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 3.6e-142 509.6 733 43.5
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 2.3e-141 506.9 695 45.3
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 5.7e-140 502.3 652 46.9
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 1.3e-139 501.1 698 46.8
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 1.7e-139 500.7 668 46.4
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 2.2e-139 500.4 671 44.9
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 4.8e-139 499.2 571 49.4
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 1.1e-138 498.0 680 45.3
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 4.1e-138 496.1 678 45.4
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 9.1e-138 495.0 690 43.3
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 1.2e-137 494.6 693 44.4
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 1.5e-137 494.2 700 43.4
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 5.9e-137 492.3 693 45.3
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 5.9e-137 492.3 644 45.0
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 1.0e-136 491.5 638 44.4
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.4e-135 487.6 634 45.4
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 7.2e-135 485.3 709 42.5
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 9.4e-135 485.0 691 42.8
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 9.4e-135 485.0 685 43.4
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 1.2e-134 484.6 687 44.4
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.0e-133 481.5 655 44.9
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 6.7e-133 478.8 643 44.2
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 1.3e-131 474.6 647 43.3
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 1.4e-130 471.1 660 43.3
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.8e-130 470.7 599 47.4
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 4.1e-130 469.5 761 41.8
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 1.5e-129 467.6 690 41.4
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 2.0e-129 467.2 571 46.2
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 2.0e-129 467.2 652 43.6
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 2.6e-129 466.8 666 43.2
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 5.9e-129 465.7 619 45.4
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 5.0e-128 462.6 712 43.4
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 2.7e-126 456.8 647 43.7
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 3.6e-126 456.4 668 42.7
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 4.7e-126 456.1 742 42.0
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 1.0e-125 454.9 728 41.6
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 1.8e-122 444.1 661 41.5
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 2.9e-120 436.8 594 43.3
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 2.9e-120 436.8 643 42.8
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 5.0e-120 436.0 564 45.7
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 2.3e-117 427.2 589 44.0
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 2.3e-117 427.2 589 44.0
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 1.5e-116 424.5 593 42.7
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 7.5e-116 422.2 590 42.2
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 4.5e-113 412.9 574 42.5
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 2.3e-109 400.6 820 35.0
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 1.2e-108 398.3 511 49.1
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 9.1e-106 388.7 585 40.7
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 5.0e-104 382.9 616 40.4
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.0e-102 375.6 540 43.0
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.8e-101 374.4 622 40.5
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 2.5e-95 354.0 537 42.5
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 6.6e-88 329.3 564 39.4
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 1.7e-75 288.1 852 28.8
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 3.2e-74 283.9 308 51.9
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 1.3e-72 278.5 783 29.0
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 9.2e-66 255.8 572 34.8
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 9.2e-66 255.8 207 60.9
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 1.0e-64 252.3 276 50.7
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.3e-63 247.3 304 48.0
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.2e-57 228.8 191 59.7
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 2.1e-57 228.0 237 51.1
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 1.9e-55 221.5 185 58.9
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.9e-53 213.0 969 24.6
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.9e-53 213.0 969 24.6
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 1.3e-51 208.8 1103 22.9
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 2.2e-51 208.0 186 55.4
vmacro09038 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 3.9e-48 197.2 154 62.3
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.5e-47 195.3 327 38.8
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.3e-38 165.6 179 48.6
Nitab4.5_0001618g0070 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.1e-37 162.5 132 62.9
Sopen04g008710 Solanum pennellii HOM05D005255 ORTHO05D006276 5.3e-37 160.2 132 61.4
SMO364G0001 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 4.5e-36 157.1 637 25.7
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 4.9e-35 153.7 400 34.0
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 1.5e-31 142.1 279 37.6
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.2e-30 138.3 90 71.1
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 9.0e-29 132.9 81 71.6
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 1.2e-28 132.5 104 62.5
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 4.5e-28 130.6 224 38.4
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.9e-26 125.2 113 57.5
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 2.5e-26 124.8 411 30.2
Lsat_1_v5_gn_8_83120 Lactuca sativa HOM05D005255 ORTHO05D006276 6.1e-25 120.2 193 38.3
FAN14G4897 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.0e-24 119.4 138 47.1
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.9e-24 117.5 78 62.8
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 1.1e-21 109.4 190 41.1
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 2.0e-20 105.1 71 59.2
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.6e-20 104.8 100 53.0
Nitab4.5_0000826g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.6e-20 104.8 66 68.2
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 5.9e-20 103.6 102 53.9
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 2.9e-19 101.3 91 59.3
Lsat_1_v5_gn_5_6521 Lactuca sativa HOM05D005255 ORTHO05D006276 8.5e-19 99.8 101 49.5
SEGI_06354 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 9.4e-18 96.3 69 66.7
Pp3c12_23820 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.1e-17 95.1 75 54.7
CAN.G1237.19 Capsicum annuum HOM05D005255 ORTHO05D006276 4.8e-14 84.0 60 66.7
TAR624G0532 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.2e-14 83.2 53 75.5
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.5e-12 79.0 192 33.9
Sc24g0003990 Simmondsia chinensis HOM05D002556 ORTHO05D003153 1.5e-12 79.0 183 26.8
AT4G03130 Arabidopsis thaliana HOM05D002556 ORTHO05D003153 8.5e-11 73.2 184 26.6
Thecc.01G289800 Theobroma cacao HOM05D002556 ORTHO05D003153 1.1e-10 72.8 186 25.8
Ah.08g212730 Amaranthus hybridus HOM05D002556 ORTHO05D008572 1.4e-10 72.4 183 26.2
AL6G49810 Arabidopsis lyrata HOM05D002556 ORTHO05D003153 1.9e-10 72.0 181 26.0
BolSC21t60285H Brassica oleracea HOM05D005255 ORTHO05D021741 2.5e-10 71.6 76 44.7
SMO364G0772 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 5.5e-10 70.5 131 36.6
Hma1.2p1_0209F.1_g089150 Hydrangea macrophylla HOM05D002556 ORTHO05D003153 2.7e-09 68.2 181 25.4
Oeu047907.1 Olea europaea HOM05D002556 ORTHO05D003153 3.6e-09 67.8 187 26.2
Rhsim04G0215200 Rhododendron simsii HOM05D002556 ORTHO05D003153 3.6e-09 67.8 183 24.6
Zm00001eb417970 Zea mays HOM05D002556 ORTHO05D003153 6.1e-09 67.0 186 25.8
CDE12G0271 Ceratophyllum demersum HOM05D002556 ORTHO05D003153 1.4e-08 65.9 184 25.5
BcaB04g19772 Brassica carinata HOM05D005255 ORTHO05D021741 3.9e-08 64.3 49 61.2
C03p67440 Brassica napus HOM05D005255 ORTHO05D021741 2.0e-07 62.0 49 59.2
C03p67420 Brassica napus HOM05D005255 ORTHO05D021741 9.7e-07 59.7 49 57.1
RcHm_v2.0_Chr6g0292491 Rosa chinensis HOM05D002556 ORTHO05D003153 1.3e-06 59.3 182 24.2
CSS0031733 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 6.3e-06 57.0 191 25.7


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