Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.9e-98 360.1 168 100.0
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.3e-88 329.7 165 92.7
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-82 310.1 165 86.1
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.9e-82 307.4 162 88.3
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 1.9e-68 262.7 162 72.8
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 4.3e-68 261.5 162 72.2
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 5.7e-68 261.2 162 72.2
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 5.3e-66 254.6 162 71.0
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 5.3e-66 254.6 162 71.0
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 1.0e-64 250.4 163 69.3
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-64 250.0 162 69.1
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-64 250.0 162 69.1
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 8.7e-61 237.3 163 65.0
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.3e-59 231.1 158 70.9
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-48 196.8 124 71.0
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 6.7e-45 184.5 151 58.3
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 6.7e-45 184.5 151 58.3
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-43 180.3 162 54.9
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 2.8e-43 179.1 155 53.5
EL10Ac6g15513 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-42 177.2 171 53.2
EL10Ac6g15506 Beta vulgaris HOM05D008188 ORTHO05D010325 5.3e-42 174.9 171 52.6
EL10Ac6g15507 Beta vulgaris HOM05D008188 ORTHO05D010325 5.3e-42 174.9 171 52.6
EL10Ac6g15510 Beta vulgaris HOM05D008188 ORTHO05D010325 5.3e-42 174.9 169 53.3
EL10Ac6g15505 Beta vulgaris HOM05D008188 ORTHO05D010325 7.0e-42 174.5 168 54.2
EL10Ac6g15508 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-41 172.9 167 53.9
EL10Ac6g15512 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-41 172.9 167 53.9
EL10Ac6g15514 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-39 167.2 168 53.0
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 9.4e-39 164.1 164 51.2
EL10As8g23832 Beta vulgaris HOM05D008188 ORTHO05D010325 1.6e-38 163.3 169 50.3
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 2.1e-38 162.9 164 48.8
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.1e-38 161.4 162 48.1
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 3.0e-37 159.1 153 51.6
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 5.7e-36 154.8 158 48.1
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.7e-36 154.1 147 53.1
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 1.6e-33 146.7 162 50.6
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.6e-30 136.7 155 47.1
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.6e-30 136.7 155 47.1
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.7e-30 135.2 159 45.3
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.1e-30 134.8 155 48.4
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.2e-28 130.6 157 44.6
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 1.5e-28 130.2 155 42.6
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 5.7e-28 128.3 152 47.4
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.8e-27 125.2 157 46.5
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.3e-27 124.4 155 45.8
AUR62020330 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.1e-26 122.5 156 40.4
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.7e-25 119.4 154 40.9
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.7e-25 119.4 159 42.1
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.5e-25 119.0 155 40.6
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.7e-25 117.9 136 42.6
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.0e-24 117.5 163 39.9
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.6e-22 109.0 142 40.1
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.6e-22 109.0 142 40.1
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.6e-22 109.0 142 40.1
AUR62015891 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.0e-21 105.9 61 80.3
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.3e-19 97.8 109 42.2
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.6e-17 93.6 147 40.1
PGSC0003DMG400003733 Solanum tuberosum HOM05D000862 ORTHO05D000943 1.1e-15 87.4 157 35.0
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 8.0e-14 81.3 152 32.9
Sopen04g034000 Solanum pennellii HOM05D000862 ORTHO05D000943 1.2e-12 77.4 157 32.5
Ah.04g166240 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.5e-12 77.0 72 47.2
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.0e-12 76.6 89 40.4
Ah.04g166210 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.6e-12 76.3 70 48.6
EL10Ac4g07715 Beta vulgaris HOM05D005485 ORTHO05D010325 2.6e-12 76.3 63 57.1
Ah.04g166230 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.4e-12 75.9 70 52.9
Lsat_1_v5_gn_1_17740 Lactuca sativa HOM05D000862 ORTHO05D000943 1.3e-11 73.9 149 32.2
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.7e-11 73.6 152 32.2
QL07p019673 Quercus lobata HOM05D000862 ORTHO05D000943 1.7e-11 73.6 154 34.4
Dinv39638 Davidia involucrata HOM05D001418 ORTHO05D002038 2.2e-11 73.2 150 34.7
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.2e-11 73.2 154 29.2
QL02p008677 Quercus lobata HOM05D000862 ORTHO05D000943 2.2e-11 73.2 153 34.0
CAN.G1226.20 Capsicum annuum HOM05D000862 ORTHO05D000943 2.9e-11 72.8 161 30.4
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 4.9e-11 72.0 151 34.4
AUR62026059 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.3e-11 71.2 58 60.3
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.1e-10 70.9 89 44.9
Lju427C3T2 Lonicera japonica HOM05D000862 ORTHO05D000943 1.1e-10 70.9 155 36.1
Nitab4.5_0001740g0110 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.1e-10 70.9 151 31.8
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 1.1e-10 70.9 151 30.5
Atru.chr13.467 Acer truncatum HOM05D000862 ORTHO05D000943 3.2e-10 69.3 156 34.0
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.2e-10 69.3 161 30.4
EL10Ac4g07669 Beta vulgaris HOM05D001974 ORTHO05D001995 4.1e-10 68.9 159 32.1
Ah.04g166330 Amaranthus hybridus HOM05D008188 ORTHO05D010325 5.4e-10 68.6 57 56.1
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.4e-10 68.6 155 31.6
Lju114A8G16 Lonicera japonica HOM05D000862 ORTHO05D000943 7.0e-10 68.2 152 34.9
TAR371G0385 Trochodendron aralioides HOM05D000862 ORTHO05D000943 7.0e-10 68.2 151 34.4
Dinv39634 Davidia involucrata HOM05D001418 ORTHO05D002038 9.2e-10 67.8 151 35.1
HanXRQChr09g0257881 Helianthus annuus HOM05D000862 ORTHO05D000452 1.6e-09 67.0 158 29.1
HanXRQChr14g0431831 Helianthus annuus HOM05D000862 ORTHO05D000452 2.7e-09 66.2 158 28.5
HanXRQChr14g0431861 Helianthus annuus HOM05D000862 ORTHO05D000452 2.7e-09 66.2 158 28.5
Lju1609A2T33 Lonicera japonica HOM05D000862 ORTHO05D000943 2.7e-09 66.2 152 34.9
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.5e-09 65.9 161 29.2
Nitab4.5_0009433g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.5e-09 65.9 151 29.8
Os05g0143600 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 4.6e-09 65.5 154 29.2
AUR62010292 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.9e-09 65.1 122 32.0
CANSAT54G1589 Cannabis sativa HOM05D000862 ORTHO05D000943 7.8e-09 64.7 158 32.3
Lj4A511T16 Lonicera japonica HOM05D000862 ORTHO05D000943 7.8e-09 64.7 153 33.3
Zm00001eb392870 Zea mays HOM05D000862 ORTHO05D000943 1.0e-08 64.3 129 30.2
HanXRQChr08g0212671 Helianthus annuus HOM05D000862 ORTHO05D000943 1.3e-08 63.9 148 28.4
Lju427C3G7 Lonicera japonica HOM05D000862 ORTHO05D000943 2.3e-08 63.2 157 32.5
Nitab4.5_0002224g0030 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.3e-08 63.2 149 28.9
Nitab4.5_0002977g0130 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.3e-08 63.2 154 28.6
Ah.06g182150 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.0e-08 62.8 77 42.9
Cc01_g04380 Coffea canephora HOM05D000862 ORTHO05D000943 3.0e-08 62.8 153 32.7
HanXRQChr11g0352391 Helianthus annuus HOM05D000862 ORTHO05D000943 3.9e-08 62.4 147 30.6
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 5.0e-08 62.0 156 34.6
Nitab4.5_0002616g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.0e-08 62.0 149 27.5
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.0e-08 62.0 152 27.6
Zm00001eb167140 Zea mays HOM05D000862 ORTHO05D000452 5.0e-08 62.0 180 28.3
Os12g0198700 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 6.6e-08 61.6 152 27.6
Peaxi162Scf00417g01349 Petunia axillaris HOM05D000862 ORTHO05D000943 1.1e-07 60.8 153 33.3
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 1.1e-07 60.8 128 33.6
Ah.11g046620 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.5e-07 60.5 61 47.5
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.5e-07 60.5 150 30.7
PGSC0003DMG404017205 Solanum tuberosum HOM05D000862 ORTHO05D000943 1.5e-07 60.5 128 32.8
ECA232G2505 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.9e-07 60.1 161 29.8
Nitab4.5_0002616g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.9e-07 60.1 150 30.0
Potri.017G010900 Populus trichocarpa HOM05D000862 ORTHO05D000943 1.9e-07 60.1 152 32.2
Nitab4.5_0004186g0040 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.5e-07 59.7 149 28.2
Os02g0301800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.5e-07 59.7 159 27.0
Sopen09g033370 Solanum pennellii HOM05D000862 ORTHO05D000943 3.3e-07 59.3 128 32.8
HanXRQChr02g0042271 Helianthus annuus HOM05D000862 ORTHO05D000943 7.3e-07 58.2 133 34.6
Ah.04g166300 Amaranthus hybridus HOM05D001974 ORTHO05D001995 1.2e-06 57.4 63 41.3
Sed0022225 Sechium edule HOM05D000862 ORTHO05D000943 3.6e-06 55.8 148 31.1
TAR365G0707 Trochodendron aralioides HOM05D000101 ORTHO05D000089 3.6e-06 55.8 159 29.6
HanXRQChr02g0042141 Helianthus annuus HOM05D000862 ORTHO05D000943 8.0e-06 54.7 130 34.6


User provided reference genes

Program Settings