Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.4e-47 192.6 94 100.0
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.2e-46 189.5 94 98.9
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 1.3e-45 186.0 94 96.8
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 2.9e-45 184.9 94 95.7
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 5.4e-44 180.6 94 92.6
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 2.7e-43 178.3 94 89.4
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 6.0e-43 177.2 94 89.4
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 1.0e-42 176.4 94 90.4
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 1.0e-42 176.4 94 90.4
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.3e-42 176.0 94 89.4
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.3e-42 176.0 94 89.4
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 3.0e-42 174.9 94 88.3
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 3.0e-42 174.9 94 89.4
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 3.0e-42 174.9 94 88.3
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 3.9e-42 174.5 94 89.4
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 3.9e-42 174.5 94 88.3
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 3.9e-42 174.5 94 88.3
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 8.7e-42 173.3 94 88.3
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 1.1e-41 172.9 94 88.3
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.5e-41 172.6 94 89.4
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 87.2
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 87.2
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 88.3
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 88.3
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 87.2
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 2.5e-41 171.8 93 88.2
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 3.3e-41 171.4 94 88.3
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.3e-41 171.4 94 87.2
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 3.3e-41 171.4 94 87.2
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 3.3e-41 171.4 94 87.2
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 4.3e-41 171.0 94 86.2
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 9.6e-41 169.9 93 86.0
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.3e-40 169.5 94 86.2
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.3e-40 169.5 94 87.2
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 1.6e-40 169.1 94 85.1
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.6e-40 169.1 92 85.9
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 1.6e-40 169.1 94 85.1
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 2.1e-40 168.7 94 86.2
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 2.1e-40 168.7 94 86.2
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 87.2
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 87.2
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 85.1
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 85.1
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 85.1
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 4.8e-40 167.5 94 85.1
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 6.2e-40 167.2 94 84.0
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 6.2e-40 167.2 94 84.0
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 84.0
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 85.1
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 1.8e-39 165.6 94 84.0
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 1.8e-39 165.6 94 84.0
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 1.8e-39 165.6 94 84.0
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 84.0
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 84.0
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 84.0
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 3.1e-39 164.9 93 83.9
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 3.1e-39 164.9 94 83.0
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 6.9e-39 163.7 94 84.0
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 6.9e-39 163.7 94 84.0
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 6.9e-39 163.7 94 84.0
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 9.0e-39 163.3 93 79.6
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 9.0e-39 163.3 93 79.6
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 9.0e-39 163.3 93 79.6
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.2e-38 162.9 94 83.0
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.6e-38 161.8 94 81.9
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 81.9
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 4.5e-38 161.0 94 81.9
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 5.8e-38 160.6 94 79.8
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 7.6e-38 160.2 93 80.6
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.6e-38 160.2 93 80.6
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.6e-38 160.2 93 80.6
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.6e-38 160.2 93 80.6
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.6e-38 160.2 93 80.6
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 1.3e-37 159.5 94 79.8
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.7e-37 159.1 94 80.9
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.2e-37 158.7 94 80.9
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 2.2e-37 158.7 94 80.9
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.2e-37 158.7 94 80.9
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 2.9e-37 158.3 94 80.9
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 3.8e-37 157.9 94 81.9
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 3.8e-37 157.9 94 78.7
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 3.8e-37 157.9 94 80.9
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 4.9e-37 157.5 94 77.7
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 4.9e-37 157.5 94 79.8
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 4.9e-37 157.5 117 70.9
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 6.4e-37 157.1 94 79.8
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 8.4e-37 156.8 94 76.6
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 8.4e-37 156.8 94 79.8
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 1.1e-36 156.4 94 81.9
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 78.7
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 1.4e-36 156.0 95 81.1
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.4e-36 156.0 96 81.2
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.9e-36 155.6 94 79.8
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 1.9e-36 155.6 94 79.8
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 2.4e-36 155.2 94 80.9
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 2.4e-36 155.2 94 80.9
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 3.2e-36 154.8 94 78.7
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 3.2e-36 154.8 94 75.5
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 4.2e-36 154.5 94 79.8
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 78.7
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 7.1e-36 153.7 94 78.7
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 9.3e-36 153.3 95 78.9
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 9.3e-36 153.3 95 78.9
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 1.2e-35 152.9 95 80.0
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.1e-35 152.1 94 78.7
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 76.6
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 3.5e-35 151.4 94 76.6
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.5e-35 151.4 94 76.6
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 4.6e-35 151.0 87 81.6
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 1.3e-34 149.4 93 77.4
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 2.3e-34 148.7 94 73.4
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 3.0e-34 148.3 94 75.5
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 3.0e-34 148.3 94 75.5
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 3.0e-34 148.3 94 75.5
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 3.9e-34 147.9 94 75.5
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 3.9e-34 147.9 93 76.3
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 3.9e-34 147.9 94 76.6
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 5.1e-34 147.5 94 74.5
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 5.1e-34 147.5 87 77.0
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 1.1e-33 146.4 89 76.4
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 1.1e-33 146.4 94 75.5
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 74.5
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 1.9e-33 145.6 94 74.5
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 2.5e-33 145.2 81 84.0
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 4.3e-33 144.4 93 72.0
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 4.3e-33 144.4 93 72.0
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 5.6e-33 144.1 95 75.8
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 5.6e-33 144.1 95 75.8
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 7.4e-33 143.7 87 78.2
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 1.6e-32 142.5 87 75.9
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.6e-32 142.5 150 53.3
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 2.1e-32 142.1 81 81.5
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 2.8e-32 141.7 95 74.7
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.4e-31 139.4 93 68.8
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.8e-31 139.0 93 68.8
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 2.4e-31 138.7 93 67.7
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 1.2e-30 136.3 93 69.9
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 1.5e-30 136.0 93 67.7
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 2.6e-30 135.2 87 72.4
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 3.4e-30 134.8 91 69.2
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 3.4e-30 134.8 91 69.2
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 7.6e-30 133.7 93 63.4
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 9.9e-30 133.3 96 68.8
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.7e-29 132.5 78 83.3
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 1.7e-29 132.5 158 47.5
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 4.9e-29 131.0 91 68.1
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.4e-28 129.4 91 67.0
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 7.1e-28 127.1 93 59.1
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 1.2e-27 126.3 87 69.0
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 7.9e-27 123.6 87 67.8
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 1.0e-26 123.2 69 84.1
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.0e-26 123.2 63 93.7
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 5.1e-26 120.9 94 63.8
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 5.1e-26 120.9 95 64.2
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 6.7e-26 120.6 63 88.9
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.9e-25 119.0 86 70.9
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 5.6e-25 117.5 78 71.8
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 5.6e-25 117.5 79 68.4
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 7.4e-25 117.1 62 88.7
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 9.6e-25 116.7 62 87.1
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 8.2e-24 113.6 94 63.8
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.2e-22 109.8 93 58.1
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 4.5e-22 107.8 67 77.6
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.6e-22 107.1 95 63.2
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 2.5e-20 102.1 81 60.5
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 2.5e-20 102.1 81 60.5
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 5.7e-17 90.9 93 49.5
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 9.7e-17 90.1 79 50.6
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 9.7e-17 90.1 79 53.2
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 6.5e-13 77.4 70 52.9
SHI25717 Sapria himalayana HOM05D003862 ORTHO05D004398 5.3e-07 57.8 61 49.2
CDE04G1893 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 4.5e-06 54.7 40 67.5


User provided reference genes

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