Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 2.0e-223 778.9 408 100.0
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.2e-159 567.0 354 87.0
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 2.9e-158 562.4 414 73.9
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 3.0e-139 499.2 389 67.9
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 2.4e-136 489.6 389 68.4
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 9.0e-136 487.6 389 67.6
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 9.0e-136 487.6 408 63.2
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 2.6e-135 486.1 385 65.5
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 7.9e-132 474.6 404 64.4
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 1.1e-130 470.7 407 64.4
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 4.8e-129 465.3 387 65.1
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 6.3e-129 464.9 384 65.1
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 2.4e-128 463.0 384 66.1
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.9e-127 458.4 402 62.7
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 7.7e-127 458.0 402 62.7
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 1.7e-126 456.8 400 62.8
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 8.5e-126 454.5 402 62.2
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 8.5e-126 454.5 393 64.4
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 1.4e-125 453.8 385 62.3
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 1.9e-125 453.4 411 61.8
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 4.2e-125 452.2 408 61.0
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 2.7e-124 449.5 419 59.7
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 2.7e-124 449.5 393 62.8
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 2.3e-123 446.4 411 61.1
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 6.7e-123 444.9 385 62.9
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.1e-122 444.1 425 59.8
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 2.5e-122 443.0 388 61.9
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 9.7e-122 441.0 389 61.7
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 9.7e-122 441.0 405 60.0
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 9.7e-122 441.0 407 60.0
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 9.7e-122 441.0 409 60.1
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 4.8e-121 438.7 394 60.2
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 8.2e-121 438.0 425 57.9
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 1.1e-120 437.6 361 64.8
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 1.4e-120 437.2 393 60.1
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 4.1e-120 435.6 392 59.9
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 5.3e-120 435.3 393 59.8
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 6.9e-120 434.9 395 61.3
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.2e-119 434.1 407 59.5
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 1.2e-119 434.1 381 61.7
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 2.0e-119 433.3 381 61.7
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 3.4e-119 432.6 352 65.6
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 4.5e-119 432.2 387 61.5
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 5.9e-119 431.8 406 60.1
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 1.1e-117 427.6 387 61.2
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 1.4e-117 427.2 428 57.2
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 4.2e-117 425.6 418 57.9
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.2e-116 424.1 405 58.8
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 2.1e-116 423.3 385 60.0
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 4.7e-116 422.2 390 61.0
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 6.1e-116 421.8 329 66.0
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.4e-115 420.6 428 56.8
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 3.9e-115 419.1 361 62.6
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 5.1e-115 418.7 353 62.3
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 4.4e-114 415.6 273 77.7
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 6.3e-113 411.8 380 60.5
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 1.1e-112 411.0 397 56.7
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 3.1e-112 409.5 361 60.9
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 5.3e-112 408.7 429 55.7
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 5.3e-112 408.7 342 65.2
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 1.5e-111 407.1 415 56.4
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 7.7e-111 404.8 379 57.5
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 2.2e-110 403.3 268 82.5
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 5.0e-110 402.1 379 58.0
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 1.2e-108 397.5 346 62.1
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 3.0e-107 392.9 395 52.7
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 4.8e-105 385.6 406 54.4
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 1.6e-103 380.6 331 61.6
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 4.5e-103 379.0 353 60.1
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 2.5e-101 373.2 349 56.2
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 2.1e-100 370.2 244 77.5
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 1.2e-98 364.4 371 56.6
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 7.5e-98 361.7 311 64.0
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 5.9e-95 352.1 408 50.7
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 7.2e-93 345.1 408 52.2
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 7.0e-88 328.6 385 47.8
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 2.0e-87 327.0 411 48.4
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 4.5e-87 325.9 315 56.2
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 5.5e-85 318.9 462 44.4
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 2.1e-84 317.0 377 49.9
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 1.5e-82 310.8 220 71.8
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 7.5e-82 308.5 397 47.4
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 7.0e-80 302.0 308 57.5
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 5.6e-77 292.4 277 59.2
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 5.2e-75 285.8 201 72.1
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.9e-69 267.3 325 48.0
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 4.0e-67 259.6 186 71.0
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 6.8e-67 258.8 399 42.6
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 6.4e-65 252.3 186 69.9
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.7e-62 244.2 302 49.0
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 2.3e-62 243.8 356 40.7
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 1.2e-55 221.5 390 37.9
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 2.1e-52 210.7 216 55.6
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 6.4e-49 199.1 140 75.0
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 2.3e-38 164.1 118 72.9
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 1.9e-37 161.0 127 67.7
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 1.8e-35 154.5 113 68.1
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 2.0e-34 151.0 111 68.5
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 1.2e-31 141.7 99 72.7
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 4.8e-28 129.8 174 44.8
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 2.4e-27 127.5 347 31.1
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 4.5e-26 123.2 81 75.3
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 2.2e-17 94.4 87 57.5
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 3.8e-17 93.6 80 51.2
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 1.6e-15 88.2 383 26.9
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 5.9e-10 69.7 77 54.5
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 7.7e-10 69.3 56 57.1
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 7.2e-08 62.8 54 57.4
CBR_g28648 Chara braunii HOM05D001509 ORTHO05D001361 1.8e-06 58.2 185 28.1
FAN19G1870 Fragaria x ananassa HOM05D001509 ORTHO05D001361 3.9e-06 57.0 301 20.9
FvH4_1g22920 Fragaria vesca HOM05D001509 ORTHO05D001361 6.7e-06 56.2 301 20.9
FAN23G0246 Fragaria x ananassa HOM05D001509 ORTHO05D001361 6.7e-06 56.2 272 24.6


User provided reference genes

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