Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025676 Chenopodium quinoa HOM05D007996 ORTHO05D009821 5.4e-22 107.1 67 100.0
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 2.1e-21 105.1 67 83.6
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 2.9e-15 84.7 71 67.6
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 1.0e-12 76.3 66 63.6
Haze_07260 Corylus avellana HOM05D007996 ORTHO05D009821 2.3e-12 75.1 66 77.3
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 2.3e-12 75.1 66 65.2
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 3.0e-12 74.7 64 65.6
Lj4g0006448 Lotus japonicus HOM05D007996 ORTHO05D009821 3.9e-12 74.3 64 73.4
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 3.9e-12 74.3 67 76.1
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 5.1e-12 73.9 65 64.6
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 5.1e-12 73.9 65 64.6
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 5.1e-12 73.9 65 64.6
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 1.9e-11 72.0 67 61.2
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 1.9e-11 72.0 67 73.1
SalBow5G3809 Salvia bowleyana HOM05D007996 ORTHO05D009821 2.5e-11 71.6 69 58.0
Lalb_Chr08g0236981 Lupinus albus HOM05D007996 ORTHO05D009821 3.3e-11 71.2 62 59.7
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 4.3e-11 70.9 66 71.2
SalBow5G2505 Salvia bowleyana HOM05D007996 ORTHO05D009821 5.6e-11 70.5 69 56.5
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 7.4e-11 70.1 66 65.2
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 9.6e-11 69.7 72 58.3
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 9.6e-11 69.7 62 67.7
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 1.3e-10 69.3 71 57.7
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 1.6e-10 68.9 67 73.1
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 2.8e-10 68.2 63 74.6
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 2.8e-10 68.2 65 69.2
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 4.8e-10 67.4 65 72.3
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 4.8e-10 67.4 65 70.8
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 8.2e-10 66.6 68 58.8
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 8.2e-10 66.6 63 55.6
Cpa.g.sc4.79 Carica papaya HOM05D007996 ORTHO05D009821 1.4e-09 65.9 36 88.9
FAN04G1274 Fragaria x ananassa HOM05D007996 ORTHO05D009821 1.8e-09 65.5 65 70.8
FAN13G1950 Fragaria x ananassa HOM05D007996 ORTHO05D009821 1.8e-09 65.5 65 70.8
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 2.4e-09 65.1 74 55.4
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 2.4e-09 65.1 74 55.4
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 2.4e-09 65.1 74 55.4
Nitab4.5_0005327g0040 Nicotiana tabacum HOM05D007996 ORTHO05D009821 2.4e-09 65.1 67 58.2
FAN08G0192 Fragaria x ananassa HOM05D007996 ORTHO05D009821 4.0e-09 64.3 66 71.2
FAN18G2201 Fragaria x ananassa HOM05D007996 ORTHO05D009821 9.0e-09 63.2 66 69.7
RcHm_v2.0_Chr7g0190871 Rosa chinensis HOM05D007996 ORTHO05D009821 9.0e-09 63.2 68 63.2
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 1.5e-08 62.4 36 83.3
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 2.6e-08 61.6 68 54.4
Prupe.5G156000 Prunus persica HOM05D007996 ORTHO05D009821 2.6e-08 61.6 70 61.4
Migut.I00487 Erythranthe guttata HOM05D007996 ORTHO05D009821 3.4e-08 61.2 62 51.6
ClCG03G003560 Citrullus lanatus HOM05D007996 ORTHO05D009821 4.5e-08 60.8 67 52.2
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 4.5e-08 60.8 70 52.9
Manes.06G116300 Manihot esculenta HOM05D007996 ORTHO05D009821 5.8e-08 60.5 36 80.6
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 5.8e-08 60.5 71 52.1
BcaB08g35412 Brassica carinata HOM05D013032 ORTHO05D009821 7.6e-08 60.1 68 50.0
Carub.0008s1039 Capsella rubella HOM05D013032 ORTHO05D009821 7.6e-08 60.1 76 48.7
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 7.6e-08 60.1 77 53.2
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 7.6e-08 60.1 36 80.6
COL.COLO4_16835 Corchorus olitorius HOM05D007996 ORTHO05D009821 1.0e-07 59.7 71 67.6
Sed0008862 Sechium edule HOM05D007996 ORTHO05D009821 1.3e-07 59.3 68 54.4
BcaC04g20800 Brassica carinata HOM05D013032 ORTHO05D009821 1.7e-07 58.9 75 46.7
A10p08350 Brassica napus HOM05D013032 ORTHO05D009821 1.7e-07 58.9 75 46.7
BolC9t56782H Brassica oleracea HOM05D013032 ORTHO05D009821 1.7e-07 58.9 75 46.7
BraSC37t46169Z Brassica rapa HOM05D013032 ORTHO05D009821 1.7e-07 58.9 75 46.7
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 1.7e-07 58.9 67 56.7
Sp6g12420 Schrenkiella parvula HOM05D013032 ORTHO05D009821 1.7e-07 58.9 75 45.3
THA.LOC109116227 Tarenaya hassleriana HOM05D007996 ORTHO05D009821 1.7e-07 58.9 58 51.7
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 2.2e-07 58.5 66 50.0
CARHR258170 Cardamine hirsuta HOM05D013032 ORTHO05D009821 2.9e-07 58.2 74 47.3
AT5G50335 Arabidopsis thaliana HOM05D013032 ORTHO05D009821 4.9e-07 57.4 75 46.7
CAN.G352.51 Capsicum annuum HOM05D007996 ORTHO05D009821 6.5e-07 57.0 72 48.6
Peaxi162Scf00089g00319 Petunia axillaris HOM05D007996 ORTHO05D009821 6.5e-07 57.0 55 61.8
Lj1g0020512 Lotus japonicus HOM05D007996 ORTHO05D009821 8.4e-07 56.6 61 62.3
Oeu045473.1 Olea europaea HOM05D007996 ORTHO05D009821 1.1e-06 56.2 67 56.7
CsaV3_1G009400 Cucumis sativus L. HOM05D007996 ORTHO05D009821 1.9e-06 55.5 70 48.6
MBI06_g40149_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 1.9e-06 55.5 53 56.6
AL8G24410 Arabidopsis lyrata HOM05D013032 ORTHO05D009821 2.5e-06 55.1 75 45.3
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 2.5e-06 55.1 32 84.4
MELO3C002341.2 Cucumis melo HOM05D007996 ORTHO05D009821 3.2e-06 54.7 73 46.6
Actinidia16189 Actinidia chinensis HOM05D007996 ORTHO05D009821 4.2e-06 54.3 37 75.7
Thhalv10015187m.g Eutrema salsugineum HOM05D013032 ORTHO05D009821 4.2e-06 54.3 75 44.0
MBI11_g42682_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 4.2e-06 54.3 38 71.1
Glyma.04G193300 Glycine max HOM05D007996 ORTHO05D009821 5.5e-06 53.9 58 55.2
Oeu037569.1 Olea europaea HOM05D007996 ORTHO05D009821 5.5e-06 53.9 67 55.2
Aqoxy5G03550 Aquilegia oxysepala HOM05D007996 ORTHO05D009821 7.1e-06 53.5 56 57.1
Nn3g16560 Nelumbo nucifera HOM05D007996 ORTHO05D009821 7.1e-06 53.5 37 70.3
Lsat_1_v5_gn_1_29541 Lactuca sativa HOM05D007996 ORTHO05D009821 9.3e-06 53.1 75 42.7


User provided reference genes

Program Settings