Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.0e-280 968.4 470 100.0
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.3e-212 742.3 467 80.5
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 6.2e-181 637.9 465 68.8
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 2.4e-156 556.2 482 62.4
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 6.5e-146 521.5 459 58.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 1.4e-137 493.8 457 57.3
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 6.7e-135 485.0 457 56.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 2.6e-134 483.0 470 54.0
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 5.7e-134 481.9 455 55.6
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 2.8e-133 479.6 447 57.0
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.4e-132 477.2 452 55.8
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 1.8e-132 476.9 464 55.2
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 9.1e-132 474.6 482 52.9
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 3.5e-131 472.6 453 55.0
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.7e-130 470.3 453 55.8
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.7e-130 470.3 449 55.5
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 2.9e-130 469.5 455 54.5
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 5.0e-130 468.8 467 52.7
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 5.0e-130 468.8 463 52.7
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 5.0e-130 468.8 453 54.5
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 8.5e-130 468.0 453 54.7
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 4.7e-128 462.2 462 52.8
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 4.0e-127 459.1 464 53.0
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 5.2e-127 458.8 459 52.7
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.2e-126 457.6 451 53.2
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 5.7e-126 455.3 465 52.9
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 5.7e-126 455.3 470 52.6
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.3e-125 454.1 449 54.6
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 1.7e-125 453.8 457 52.5
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.7e-125 453.8 447 54.1
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 2.8e-125 453.0 463 53.1
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 3.7e-125 452.6 454 52.4
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 3.7e-125 452.6 465 52.9
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 2.0e-123 446.8 504 51.4
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.7e-123 446.4 451 51.9
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 5.9e-123 445.3 464 52.2
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 7.7e-123 444.9 475 52.0
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.2e-122 443.4 462 50.9
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 3.8e-122 442.6 462 51.7
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 6.5e-122 441.8 463 51.2
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 5.5e-121 438.7 457 53.0
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 7.2e-121 438.3 456 53.1
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 9.4e-121 438.0 464 52.4
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.2e-120 437.6 487 51.5
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.2e-120 437.6 487 51.5
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.6e-120 437.2 466 51.3
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.6e-120 436.0 474 49.4
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 8.0e-120 434.9 576 43.9
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 1.4e-119 434.1 452 52.4
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 2.3e-119 433.3 452 51.8
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 2.3e-119 433.3 454 51.5
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.5e-118 430.6 462 51.9
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 3.4e-118 429.5 458 50.9
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 5.7e-118 428.7 471 49.7
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 9.8e-118 427.9 455 52.1
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.3e-117 427.6 463 51.8
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.7e-117 427.2 461 51.4
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.2e-117 426.8 460 51.7
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 2.2e-117 426.8 459 52.5
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.8e-117 426.4 461 50.5
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 1.4e-116 424.1 459 49.5
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 1.4e-116 424.1 459 49.9
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 1.8e-116 423.7 461 51.0
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.8e-116 423.7 473 49.5
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.6e-115 420.6 459 49.9
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.0e-114 417.9 450 51.3
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 3.8e-114 416.0 461 48.8
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 5.5e-113 412.1 457 49.2
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 7.2e-113 411.8 463 49.5
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 9.5e-113 411.4 455 49.0
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.2e-112 411.0 350 61.7
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 3.6e-112 409.5 465 49.2
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 6.1e-112 408.7 477 49.3
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 5.7e-110 402.1 462 48.1
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 6.3e-109 398.7 462 49.4
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 8.3e-109 398.3 399 53.9
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 3.1e-108 396.4 447 48.8
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.6e-107 394.0 458 46.5
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.1e-105 387.9 483 45.3
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 8.0e-104 381.7 401 52.4
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 3.1e-103 379.8 390 51.0
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.5e-102 377.5 406 52.5
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 9.8e-102 374.8 407 50.9
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 7.0e-100 368.6 440 45.9
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 3.9e-98 362.8 462 43.5
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 3.6e-96 356.3 386 51.6
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 2.6e-94 350.1 353 54.7
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.9e-89 334.0 371 50.1
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 4.7e-88 329.3 434 41.7
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.5e-86 324.3 469 41.8
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 3.7e-85 319.7 394 47.5
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 6.4e-85 318.9 429 42.4
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.1e-84 316.2 467 39.4
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 4.4e-78 296.2 312 47.1
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 9.9e-78 295.0 379 43.0
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.8e-72 276.9 358 47.5
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 7.6e-70 268.9 385 41.6
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 4.2e-60 236.5 304 44.4
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 2.3e-58 230.7 164 65.2
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 2.1e-51 207.6 210 47.1
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 4.5e-46 189.9 247 46.2
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 6.5e-45 186.0 161 53.4
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 6.7e-42 176.0 235 40.9
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.3e-40 171.8 241 45.6
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.0e-22 111.3 173 42.8
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 1.6e-19 101.7 89 55.1
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.7e-16 91.7 181 39.8
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 4.8e-16 90.1 184 34.2
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 1.2e-14 85.5 82 51.2
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 4.2e-12 77.0 208 28.8
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.5e-06 57.0 98 40.8


User provided reference genes

Program Settings