Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.1e-206 723.0 352 100.0
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 7.8e-144 514.2 352 75.6
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 3.4e-139 498.8 346 72.8
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.8e-109 398.7 360 60.6
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 8.1e-109 397.9 343 61.2
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 5.5e-97 358.6 292 61.0
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 5.5e-97 358.6 292 59.2
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 6.0e-96 355.1 328 55.8
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.3e-95 354.0 322 55.9
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 2.3e-95 353.2 345 54.8
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 3.0e-95 352.8 326 55.5
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 8.7e-95 351.3 290 59.7
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 4.3e-94 349.0 292 59.9
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 5.6e-94 348.6 285 60.4
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 7.4e-94 348.2 290 59.3
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 2.1e-93 346.7 340 54.7
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 3.7e-93 345.9 279 63.4
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 6.2e-93 345.1 342 53.8
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 8.1e-93 344.7 302 56.0
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 8.1e-93 344.7 324 53.1
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.1e-92 344.4 335 53.7
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 2.4e-92 343.2 306 57.2
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 5.3e-92 342.0 303 54.1
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 2.0e-91 340.1 320 53.1
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 2.6e-91 339.7 288 56.6
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 7.6e-91 338.2 303 53.8
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-90 337.8 277 57.0
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.2e-90 336.7 341 53.4
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 3.8e-90 335.9 312 53.8
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 4.9e-90 335.5 300 56.3
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 8.4e-90 334.7 340 51.8
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.1e-89 334.3 312 53.5
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-89 334.0 277 56.7
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.4e-89 334.0 288 57.6
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 3.2e-89 332.8 294 54.8
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 5.5e-89 332.0 281 59.1
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 9.3e-89 331.3 289 58.5
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.8e-87 327.0 350 49.1
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 1.8e-87 327.0 283 55.1
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.8e-87 327.0 285 56.8
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.8e-87 327.0 332 53.9
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 3.9e-87 325.9 282 57.8
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 8.7e-87 324.7 273 58.6
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 2.5e-86 323.2 315 53.3
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.5e-86 323.2 284 57.7
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 2.5e-86 323.2 287 55.1
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 5.7e-86 322.0 323 50.8
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 5.7e-86 322.0 278 56.5
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 9.6e-86 321.2 288 55.6
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 2.8e-85 319.7 304 52.6
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 8.2e-85 318.2 279 55.2
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.1e-84 317.8 338 50.3
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.4e-84 316.6 299 53.2
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 5.3e-84 315.5 295 55.9
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.5e-83 313.9 279 55.2
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.0e-83 313.5 288 53.5
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.0e-83 313.5 300 52.3
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.0e-83 313.5 300 52.3
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 2.0e-83 313.5 329 48.3
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 1.3e-82 310.8 296 54.7
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 2.2e-82 310.1 344 48.8
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 5.0e-82 308.9 288 52.8
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 6.5e-82 308.5 308 51.0
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 8.4e-82 308.1 310 50.6
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.4e-81 307.4 400 46.5
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 4.2e-81 305.8 288 52.8
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 4.2e-81 305.8 287 54.0
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 1.2e-80 304.3 273 57.1
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 3.3e-78 296.2 330 48.2
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 2.8e-77 293.1 275 52.4
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.1e-76 291.2 303 52.1
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.8e-76 290.4 258 56.6
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 5.3e-76 288.9 258 53.9
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 5.3e-76 288.9 260 53.5
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.5e-75 287.3 258 53.5
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 2.6e-75 286.6 288 51.7
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 4.5e-75 285.8 304 51.6
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 1.1e-73 281.2 263 51.0
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.2e-73 279.6 289 50.5
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 2.0e-62 243.8 338 42.9
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 3.3e-62 243.0 228 51.8
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 7.4e-62 241.9 245 49.4
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 7.2e-57 225.3 235 51.5
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.6e-56 223.0 205 54.6
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.5e-46 191.0 274 39.8
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 1.3e-45 188.0 294 38.1
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 7.7e-43 178.7 128 67.2
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 5.0e-42 176.0 158 55.1
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 2.7e-40 170.2 107 70.1
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 3.0e-39 166.8 280 35.4
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-38 164.9 106 65.1
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.6e-35 154.5 274 34.3
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 3.8e-34 149.8 101 62.4
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 4.7e-32 142.9 81 70.4
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 9.8e-30 135.2 178 46.1
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.2e-29 134.0 80 71.2
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 7.3e-25 119.0 91 61.5
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 2.8e-24 117.1 299 29.1
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.0e-23 115.2 69 68.1
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-17 94.7 50 74.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-17 94.7 50 74.0
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 6.2e-16 89.4 97 51.5
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-14 85.1 72 55.6
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-14 85.1 72 55.6
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.9e-12 77.8 59 55.9
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 7.1e-12 75.9 58 56.9
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 7.1e-12 75.9 58 56.9
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 4.6e-11 73.2 53 64.2
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 4.3e-09 66.6 43 58.1
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 9.5e-09 65.5 131 40.5
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.2e-08 65.1 106 36.8
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 1.1e-07 62.0 60 43.3
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 2.3e-07 60.8 32 75.0
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 2.0e-06 57.8 46 56.5


User provided reference genes

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