Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 2.0e-183 645.6 319 100.0
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.2e-172 609.8 319 95.0
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.9e-141 506.1 319 79.9
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.7e-103 379.4 319 61.4
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 2.5e-96 356.3 304 61.5
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 4.6e-95 352.1 320 55.0
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 4.6e-95 352.1 292 58.9
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.3e-94 350.5 318 54.7
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 3.0e-94 349.4 320 55.6
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 7.4e-93 344.7 319 52.4
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 6.2e-92 341.7 312 54.5
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 1.1e-91 340.9 315 53.7
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 2.4e-91 339.7 291 56.7
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 4.1e-91 339.0 310 53.5
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.3e-91 338.6 283 58.7
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 9.0e-91 337.8 293 55.6
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.5e-90 337.0 283 58.3
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.5e-90 337.0 283 58.7
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 2.6e-90 336.3 287 58.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 2.6e-90 336.3 310 53.9
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 5.8e-90 335.1 287 59.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 5.8e-90 335.1 319 53.6
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 7.6e-90 334.7 290 58.3
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.3e-89 334.0 296 56.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 2.2e-89 333.2 286 58.0
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 5.0e-89 332.0 295 55.9
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 3.2e-88 329.3 321 53.3
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 3.2e-88 329.3 298 57.0
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 9.3e-88 327.8 292 56.2
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 6.1e-87 325.1 310 52.6
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 7.9e-87 324.7 309 53.4
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 7.9e-87 324.7 279 58.4
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.0e-86 324.3 329 51.4
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.8e-86 323.6 292 54.1
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 3.0e-86 322.8 292 54.5
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.1e-86 322.0 293 54.9
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.1e-86 322.0 287 56.1
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 6.7e-86 321.6 299 55.5
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.1e-85 320.9 299 54.2
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.1e-85 320.9 287 56.1
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.5e-85 320.5 299 54.2
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.3e-85 319.3 341 50.4
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.8e-84 315.5 348 47.1
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 4.8e-84 315.5 318 51.3
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.2e-84 314.7 278 56.8
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.8e-83 313.5 303 53.5
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 4.1e-83 312.4 273 58.2
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.2e-82 310.8 329 48.6
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.7e-81 307.0 295 50.2
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.9e-81 306.2 255 56.9
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 5.0e-81 305.4 297 52.2
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 8.5e-81 304.7 334 49.1
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.1e-80 304.3 286 52.4
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 1.4e-80 303.9 271 55.7
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 2.5e-80 303.1 308 50.3
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 4.2e-80 302.4 307 51.1
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 7.2e-80 301.6 295 54.6
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.2e-79 300.8 301 50.8
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.1e-79 300.1 288 52.1
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 7.9e-79 298.1 234 61.5
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 7.9e-79 298.1 290 51.7
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.0e-78 297.7 318 51.3
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.4e-78 297.4 255 55.7
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 3.0e-78 296.2 288 52.1
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.0e-78 296.2 320 50.0
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 3.0e-78 296.2 288 51.7
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.5e-77 293.9 292 50.3
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 4.3e-77 292.4 300 51.0
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.3e-76 290.8 320 49.7
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.7e-76 290.4 296 50.0
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.7e-76 290.4 296 50.0
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 2.2e-76 290.0 297 49.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 6.3e-76 288.5 291 50.5
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 6.3e-76 288.5 319 50.2
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 6.3e-76 288.5 293 47.4
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 8.2e-76 288.1 309 48.5
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 4.1e-75 285.8 298 49.7
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 9.1e-75 284.6 302 48.7
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.2e-74 284.3 257 52.1
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 2.0e-74 283.5 285 50.9
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.6e-74 283.1 291 49.5
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.4e-74 282.7 313 49.8
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 4.5e-74 282.3 234 59.0
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 3.8e-73 279.3 361 44.9
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 3.8e-73 279.3 255 54.9
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 1.4e-72 277.3 285 50.5
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 4.2e-72 275.8 285 50.2
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 5.5e-72 275.4 310 46.8
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 1.6e-71 273.9 277 50.2
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.6e-71 273.9 296 49.7
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.4e-67 260.0 264 50.0
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.0e-65 254.6 209 60.3
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.9e-64 250.4 286 45.5
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 2.7e-63 246.5 289 46.4
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.9e-56 223.8 268 47.0
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.2e-55 221.1 206 51.9
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 4.0e-38 162.9 132 58.3
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 5.2e-38 162.5 139 58.3
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 5.2e-38 162.5 296 34.8
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-36 157.5 143 51.0
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.4e-35 153.7 124 55.6
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.4e-28 129.0 124 50.0
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.0e-25 121.7 236 34.3
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 2.1e-23 114.0 255 30.6
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.1e-19 101.7 116 43.1
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.2e-18 98.2 141 37.6
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 5.6e-16 89.4 86 52.3
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.6e-15 87.8 86 51.2
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 7.6e-13 79.0 86 46.5
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 2.3e-09 67.4 102 37.3
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.3e-09 67.4 64 56.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 1.2e-07 61.6 124 25.0
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 1.1e-06 58.5 207 22.7
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-06 58.5 72 41.7
SMO151G0006 Selaginella moellendorffii HOM05D006737 ORTHO05D008418 6.8e-06 55.8 110 32.7


User provided reference genes

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