Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025573 Chenopodium quinoa HOM05D001332 ORTHO05D001894 2.6e-37 158.3 85 100.0
AUR62000623 Chenopodium quinoa HOM05D001332 ORTHO05D001894 2.8e-15 85.1 81 60.5
AUR62006976 Chenopodium quinoa HOM05D001332 ORTHO05D001894 3.7e-15 84.7 81 60.5
EL10Ac4g09746 Beta vulgaris HOM05D001332 ORTHO05D001894 1.1e-14 83.2 81 56.8
AUR62025524 Chenopodium quinoa HOM05D001332 ORTHO05D001894 3.1e-14 81.6 65 66.2
Ah.02g118260 Amaranthus hybridus HOM05D001332 ORTHO05D001894 2.0e-13 79.0 81 51.9
Sc16g0009830 Simmondsia chinensis HOM05D001332 ORTHO05D001894 5.9e-13 77.4 81 50.6
Hund21760 Selenicereus undatus HOM05D001332 ORTHO05D001894 1.7e-12 75.9 79 53.2
GSVIVG01000239001 Vitis vinifera HOM05D001332 ORTHO05D001894 3.8e-12 74.7 81 51.9
Atru.chr3.1473 Acer truncatum HOM05D001332 ORTHO05D001894 5.0e-12 74.3 81 49.4
Potri.004G134066 Populus trichocarpa HOM05D001332 ORTHO05D001894 8.5e-12 73.6 81 50.6
MSTRG.23237 Avicennia marina HOM05D001332 ORTHO05D001894 1.4e-11 72.8 56 66.1
Ciclev10026677m.g Citrus clementina HOM05D001332 ORTHO05D001894 1.4e-11 72.8 56 67.9
TAR628G0149 Trochodendron aralioides HOM05D001332 ORTHO05D001894 1.4e-11 72.8 81 51.9
Haze_19350 Corylus avellana HOM05D001332 ORTHO05D001894 2.5e-11 72.0 81 50.6
vmacro17790 Vaccinium macrocarpon HOM05D001332 ORTHO05D001894 2.5e-11 72.0 73 56.2
Dinv04535 Davidia involucrata HOM05D001332 ORTHO05D001894 4.2e-11 71.2 81 46.9
Eucgr.I00015 Eucalyptus grandis HOM05D001332 ORTHO05D001894 4.2e-11 71.2 82 51.2
THA.LOC104819478 Tarenaya hassleriana HOM05D001332 ORTHO05D001894 4.2e-11 71.2 81 49.4
Actinidia36584 Actinidia chinensis HOM05D001332 ORTHO05D001894 5.5e-11 70.9 81 49.4
PGR119G0336 Punica granatum HOM05D001332 ORTHO05D001894 5.5e-11 70.9 81 49.4
QL10p037230 Quercus lobata HOM05D001332 ORTHO05D001894 5.5e-11 70.9 81 49.4
QL10p038097 Quercus lobata HOM05D001332 ORTHO05D001894 5.5e-11 70.9 81 49.4
TWI31G0340 Tripterygium wilfordii HOM05D001332 ORTHO05D001894 7.2e-11 70.5 74 51.4
CiPaw.16G119200 Carya illinoinensis HOM05D001332 ORTHO05D001894 9.4e-11 70.1 81 46.9
GSVIVG01000240001 Vitis vinifera HOM05D001332 ORTHO05D001894 9.4e-11 70.1 81 50.6
CSS0000159 Camellia sinensis var. sinensis HOM05D001332 ORTHO05D001894 1.2e-10 69.7 59 61.0
CDE04G1088 Ceratophyllum demersum HOM05D001332 ORTHO05D001894 2.1e-10 68.9 59 59.3
Thecc.01G147300 Theobroma cacao HOM05D001332 ORTHO05D001894 2.1e-10 68.9 56 64.3
TWI31G0984 Tripterygium wilfordii HOM05D001332 ORTHO05D001894 2.1e-10 68.9 57 66.7
Prupe.4G104800 Prunus persica HOM05D001332 ORTHO05D001894 2.7e-10 68.6 81 48.1
Prupe.4G105000 Prunus persica HOM05D001332 ORTHO05D001894 2.7e-10 68.6 81 48.1
Haze_07710 Corylus avellana HOM05D000001 ORTHO05D000003 3.6e-10 68.2 55 63.6
PSO210G2973 Papaver somniferum HOM05D001332 ORTHO05D001894 3.6e-10 68.2 83 47.0
PSO210G4437 Papaver somniferum HOM05D001332 ORTHO05D001894 3.6e-10 68.2 83 47.0
Prupe.5G159500 Prunus persica HOM05D001332 ORTHO05D001894 4.6e-10 67.8 81 45.7
SEGI_33501 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 4.6e-10 67.8 59 59.3
Migut.H02538 Erythranthe guttata HOM05D001332 ORTHO05D001894 6.1e-10 67.4 59 57.6
Sp1g03100 Schrenkiella parvula HOM05D001332 ORTHO05D001894 6.1e-10 67.4 59 57.6
Cpa.g.sc138.30 Carica papaya HOM05D001332 ORTHO05D001894 7.9e-10 67.0 81 49.4
Thhalv10008953m.g Eutrema salsugineum HOM05D001332 ORTHO05D001894 7.9e-10 67.0 75 48.0
Rhsim08G0128700 Rhododendron simsii HOM05D001332 ORTHO05D001894 7.9e-10 67.0 46 71.7
Aa31LG1G20550 Aethionema arabicum HOM05D000923 ORTHO05D000720 1.0e-09 66.6 59 59.3
Aqoxy6G00133 Aquilegia oxysepala HOM05D001332 ORTHO05D001894 1.0e-09 66.6 82 47.6
Cc00_g04340 Coffea canephora HOM05D001332 ORTHO05D001894 1.0e-09 66.6 59 57.6
Glyma.04G204300 Glycine max HOM05D001332 ORTHO05D001894 1.0e-09 66.6 58 63.8
SalBow8G0886 Salvia bowleyana HOM05D021639 ORTHO05D001894 1.0e-09 66.6 59 57.6
SalBow8G0934 Salvia bowleyana HOM05D021639 ORTHO05D001894 1.0e-09 66.6 59 57.6
unitig_899.g14978 Utricularia gibba HOM05D000916 ORTHO05D008340 1.0e-09 66.6 59 57.6
Nitab4.5_0006242g0010 Nicotiana tabacum HOM05D001332 ORTHO05D001894 1.4e-09 66.2 81 46.9
Peaxi162Scf00525g00618 Petunia axillaris HOM05D001332 ORTHO05D001894 1.4e-09 66.2 81 46.9
Solyc09g005390.3 Solanum lycopersicum HOM05D001332 ORTHO05D001894 1.4e-09 66.2 59 61.0
Aa31LG2G2660 Aethionema arabicum HOM05D001332 ORTHO05D001894 1.8e-09 65.9 81 45.7
Dinv20721 Davidia involucrata HOM05D001332 ORTHO05D001894 1.8e-09 65.9 56 60.7
Duzib147G0745 Durio zibethinus HOM05D001332 ORTHO05D001894 1.8e-09 65.9 56 62.5
Manes.13G153200 Manihot esculenta HOM05D001332 ORTHO05D001894 1.8e-09 65.9 81 46.9
CANSAT54G2298 Cannabis sativa HOM05D001332 ORTHO05D001894 2.3e-09 65.5 77 44.2
CARHR003620 Cardamine hirsuta HOM05D001332 ORTHO05D001894 2.3e-09 65.5 81 44.4
Nitab4.5_0000905g0100 Nicotiana tabacum HOM05D001332 ORTHO05D001894 2.3e-09 65.5 81 46.9
Nn1g08391 Nelumbo nucifera HOM05D001332 ORTHO05D001894 3.0e-09 65.1 48 64.6
Sabra04G0084100 Salix brachista HOM05D001332 ORTHO05D001894 3.0e-09 65.1 56 64.3
SEGI_17469 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 3.9e-09 64.7 46 67.4
MD05G1260500 Malus domestica HOM05D001332 ORTHO05D001894 5.1e-09 64.3 81 48.1
Sopen09g001340 Solanum pennellii HOM05D001332 ORTHO05D001894 5.1e-09 64.3 59 59.3
PGSC0003DMG400023081 Solanum tuberosum HOM05D001332 ORTHO05D001894 5.1e-09 64.3 59 57.6
AL1G13890 Arabidopsis lyrata HOM05D001332 ORTHO05D001894 6.7e-09 63.9 75 45.3
BcaC05g24455 Brassica carinata HOM05D001332 ORTHO05D001894 6.7e-09 63.9 75 45.3
C05p02480 Brassica napus HOM05D001332 ORTHO05D001894 6.7e-09 63.9 75 45.3
BolC5t29027H Brassica oleracea HOM05D001332 ORTHO05D001894 6.7e-09 63.9 75 45.3
MELO3C023210.2 Cucumis melo HOM05D001332 ORTHO05D001894 6.7e-09 63.9 82 47.6
FvH4_3g11670 Fragaria vesca HOM05D001332 ORTHO05D001894 8.8e-09 63.5 56 57.1
BcaC07g36921 Brassica carinata HOM05D001332 ORTHO05D001894 1.1e-08 63.2 75 44.0
ClCG02G000220 Citrullus lanatus HOM05D001332 ORTHO05D001894 1.1e-08 63.2 82 47.6
FAN16G1064 Fragaria x ananassa HOM05D001332 ORTHO05D001894 1.5e-08 62.8 81 44.4
Lj4A820T48 Lonicera japonica HOM05D001332 ORTHO05D001894 1.5e-08 62.8 56 58.9
AT1G04290 Arabidopsis thaliana HOM05D001332 ORTHO05D001894 1.9e-08 62.4 81 43.2
A10p02690 Brassica napus HOM05D001332 ORTHO05D001894 1.9e-08 62.4 81 43.2
BraA10t42538Z Brassica rapa HOM05D001332 ORTHO05D001894 1.9e-08 62.4 81 43.2
Duzib187G1216 Durio zibethinus HOM05D001332 ORTHO05D001894 1.9e-08 62.4 56 58.9
Gohir.A11G058700 Gossypium hirsutum HOM05D001332 ORTHO05D001894 1.9e-08 62.4 73 49.3
Gorai.007G067900 Gossypium raimondii HOM05D001332 ORTHO05D001894 1.9e-08 62.4 73 49.3
Sed0019998 Sechium edule HOM05D001332 ORTHO05D001894 1.9e-08 62.4 59 55.9
Carub.0001s0348 Capsella rubella HOM05D001332 ORTHO05D001894 2.5e-08 62.0 59 54.2
Duzib264G0962 Durio zibethinus HOM05D001332 ORTHO05D001894 2.5e-08 62.0 59 55.9
Nn5g27744 Nelumbo nucifera HOM05D001332 ORTHO05D001894 2.5e-08 62.0 49 59.2
Cc00_g04370 Coffea canephora HOM05D001332 ORTHO05D001894 3.3e-08 61.6 77 45.5
DCAR_009618 Daucus carota HOM05D001332 ORTHO05D001894 3.3e-08 61.6 57 56.1
Hma1.2p1_0296F.1_g116940 Hydrangea macrophylla HOM05D001332 ORTHO05D001894 3.3e-08 61.6 74 50.0
PSO724G0406 Papaver somniferum HOM05D001332 ORTHO05D001894 3.3e-08 61.6 81 42.0
VMungo1309G1682 Vigna mungo HOM05D001332 ORTHO05D001894 3.3e-08 61.6 51 64.7
Gohir.D11G062900 Gossypium hirsutum HOM05D001332 ORTHO05D001894 5.7e-08 60.8 73 47.9
PGR102G3087 Punica granatum HOM05D001332 ORTHO05D001894 5.7e-08 60.8 59 54.2
Lalb_Chr23g0272781 Lupinus albus HOM05D001332 ORTHO05D001894 7.4e-08 60.5 58 62.1
Nn5g27745 Nelumbo nucifera HOM05D001332 ORTHO05D001894 9.7e-08 60.1 56 57.1
Ca_17039_v3 Cicer arietinum L. HOM05D001332 ORTHO05D001894 1.3e-07 59.7 58 55.2
Lj1g0011871 Lotus japonicus HOM05D001332 ORTHO05D001894 1.3e-07 59.7 83 47.0
Duzib264G1205 Durio zibethinus HOM05D001332 ORTHO05D001894 1.7e-07 59.3 81 42.0
SEGI_37226 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 1.7e-07 59.3 59 50.8
A02p25760 Brassica napus HOM05D001332 ORTHO05D001894 2.2e-07 58.9 44 63.6
Lalb_Chr11g0068901 Lupinus albus HOM05D001332 ORTHO05D001894 2.8e-07 58.5 58 56.9
Thecc.01G147500 Theobroma cacao HOM05D001332 ORTHO05D001894 2.8e-07 58.5 81 39.5
CANSAT54G1716 Cannabis sativa HOM05D001332 ORTHO05D001894 3.7e-07 58.2 81 40.7
ECA238G3031 Erigeron canadensis HOM05D001332 ORTHO05D001894 3.7e-07 58.2 60 53.3
MD10G1239800 Malus domestica HOM05D001332 ORTHO05D001894 3.7e-07 58.2 81 44.4
Peaxi162Scf00651g00637 Petunia axillaris HOM05D001332 ORTHO05D001894 3.7e-07 58.2 80 46.2
Gohir.A10G157432 Gossypium hirsutum HOM05D001332 ORTHO05D001894 4.8e-07 57.8 56 55.4
HanXRQChr13g0394841 Helianthus annuus HOM05D001332 ORTHO05D001894 4.8e-07 57.8 57 57.9
Nitab4.5_0000835g0020 Nicotiana tabacum HOM05D001332 ORTHO05D001894 4.8e-07 57.8 46 63.0
Gorai.011G121500 Gossypium raimondii HOM05D001332 ORTHO05D001894 6.3e-07 57.4 56 53.6
Phvul.009G160000 Phaseolus vulgaris HOM05D001332 ORTHO05D001894 6.3e-07 57.4 58 56.9
C02p41080 Brassica napus HOM05D001332 ORTHO05D001894 8.2e-07 57.0 49 55.1
PSO135G0028 Papaver somniferum HOM05D001332 ORTHO05D001894 8.2e-07 57.0 59 50.8
SGA_v2.0_scaffold51G18838 Striga asiatica HOM05D001332 ORTHO05D001894 8.2e-07 57.0 46 56.5
Gohir.D12G002100 Gossypium hirsutum HOM05D001332 ORTHO05D001894 1.1e-06 56.6 60 45.0
Gorai.008G001500 Gossypium raimondii HOM05D001332 ORTHO05D001894 1.1e-06 56.6 60 45.0
Potri.004G134132 Populus trichocarpa HOM05D001332 ORTHO05D001894 1.1e-06 56.6 81 43.2
CAN.G5.9 Capsicum annuum HOM05D001332 ORTHO05D001894 1.4e-06 56.2 60 53.3
Medtr3g098130 Medicago truncatula HOM05D001332 ORTHO05D001894 1.4e-06 56.2 60 58.3
BolC2t10117H Brassica oleracea HOM05D001332 ORTHO05D001894 1.8e-06 55.8 43 60.5
CsaV3_2G019620 Cucumis sativus L. HOM05D001332 ORTHO05D001894 3.1e-06 55.1 82 45.1
Lsat_1_v5_gn_2_39360 Lactuca sativa HOM05D001332 ORTHO05D001894 3.1e-06 55.1 60 50.0
Zm00001eb434530 Zea mays HOM05D001332 ORTHO05D001894 3.1e-06 55.1 78 42.3
arahy.Tifrunner.gnm1.ann1.1BHT4U Arachis hypogaea HOM05D001332 ORTHO05D001894 4.1e-06 54.7 61 50.8
arahy.Tifrunner.gnm1.ann1.CWP525 Arachis hypogaea HOM05D001332 ORTHO05D001894 4.1e-06 54.7 61 50.8
Gohir.A12G002400 Gossypium hirsutum HOM05D001332 ORTHO05D001894 5.3e-06 54.3 60 46.7
TPR.G7793 Trifolium pratense HOM05D001332 ORTHO05D001894 5.3e-06 54.3 60 51.7
Gohir.D10G110250 Gossypium hirsutum HOM05D001332 ORTHO05D001894 6.9e-06 53.9 56 51.8
Medtr3g098100 Medicago truncatula HOM05D001332 ORTHO05D001894 6.9e-06 53.9 83 43.4
Sabra04G0084000 Salix brachista HOM05D001332 ORTHO05D001894 9.1e-06 53.5 49 55.1
SMO347G0593 Selaginella moellendorffii HOM05D001332 ORTHO05D001894 9.1e-06 53.5 81 37.0


User provided reference genes

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