Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025527 Chenopodium quinoa HOM05D002284 ORTHO05D002427 2.0e-115 419.1 206 100.0
AUR62008708 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-82 310.5 163 93.3
Hund05449 Selenicereus undatus HOM05D002284 ORTHO05D002427 5.6e-17 92.0 166 36.7
AUR62025526 Chenopodium quinoa HOM05D002284 ORTHO05D002427 4.7e-16 89.0 118 41.5
AUR62008710 Chenopodium quinoa HOM05D002284 ORTHO05D002427 1.4e-15 87.4 118 39.8
AUR62043489 Chenopodium quinoa HOM05D002284 ORTHO05D002427 1.4e-15 87.4 118 39.8
EL10Ac7g17569 Beta vulgaris HOM05D002284 ORTHO05D002427 1.2e-14 84.3 132 40.2
DCAR_002859 Daucus carota HOM05D002284 ORTHO05D002427 3.5e-11 72.8 118 37.3
Ciclev10023328m.g Citrus clementina HOM05D002284 ORTHO05D002427 4.6e-11 72.4 130 34.6
Potri.014G126300 Populus trichocarpa HOM05D002284 ORTHO05D002427 7.8e-11 71.6 134 31.3
Actinidia25819 Actinidia chinensis HOM05D002284 ORTHO05D002427 1.7e-10 70.5 129 35.7
COL.COLO4_23310 Corchorus olitorius HOM05D002284 ORTHO05D002427 1.7e-10 70.5 160 30.0
Gohir.D11G118200 Gossypium hirsutum HOM05D002284 ORTHO05D002427 1.7e-10 70.5 141 31.9
Ah.04g154880 Amaranthus hybridus HOM05D002284 ORTHO05D002427 2.3e-10 70.1 181 33.1
COL.COLO4_23309 Corchorus olitorius HOM05D002284 ORTHO05D002427 3.9e-10 69.3 128 35.2
Medtr1g087935 Medicago truncatula HOM05D002284 ORTHO05D002427 3.9e-10 69.3 129 37.2
Thecc.01G305000 Theobroma cacao HOM05D002284 ORTHO05D002427 3.9e-10 69.3 145 32.4
Gorai.007G126600 Gossypium raimondii HOM05D002284 ORTHO05D002427 6.6e-10 68.6 141 30.5
Potri.014G126200 Populus trichocarpa HOM05D002284 ORTHO05D002427 8.6e-10 68.2 124 30.6
Potri.014G126500 Populus trichocarpa HOM05D002284 ORTHO05D002427 8.6e-10 68.2 124 30.6
Actinidia21027 Actinidia chinensis HOM05D002284 ORTHO05D002427 1.1e-09 67.8 141 34.0
PSO339G6731 Papaver somniferum HOM05D002284 ORTHO05D002427 1.1e-09 67.8 116 37.1
PGR003G0002 Punica granatum HOM05D002284 ORTHO05D002427 1.1e-09 67.8 170 31.2
PGR044G0723 Punica granatum HOM05D002284 ORTHO05D002427 1.1e-09 67.8 170 31.2
Atru.chr5.1091 Acer truncatum HOM05D002284 ORTHO05D002427 1.5e-09 67.4 132 34.1
Gohir.A11G113100 Gossypium hirsutum HOM05D002284 ORTHO05D002427 1.5e-09 67.4 123 32.5
Potri.014G126250 Populus trichocarpa HOM05D002284 ORTHO05D002427 1.5e-09 67.4 124 30.6
DCAR_008035 Daucus carota HOM05D003009 ORTHO05D001701 1.9e-09 67.0 128 34.4
Sabra14G0094000 Salix brachista HOM05D002284 ORTHO05D002427 1.9e-09 67.0 142 29.6
Sabra14G0094100 Salix brachista HOM05D002284 ORTHO05D002427 1.9e-09 67.0 142 29.6
Sabra14G0094200 Salix brachista HOM05D002284 ORTHO05D002427 1.9e-09 67.0 142 29.6
Psat6g164120 Pisum sativum HOM05D002284 ORTHO05D002427 3.3e-09 66.2 117 36.8
Thecc.01G305100 Theobroma cacao HOM05D002284 ORTHO05D002427 3.3e-09 66.2 125 32.0
PSO210G6121 Papaver somniferum HOM05D002284 ORTHO05D002427 4.3e-09 65.9 116 36.2
Dinv40571 Davidia involucrata HOM05D003009 ORTHO05D001701 5.6e-09 65.5 129 36.4
Thecc.01G305500 Theobroma cacao HOM05D002284 ORTHO05D002427 5.6e-09 65.5 125 32.0
TPR.G33995 Trifolium pratense HOM05D002284 ORTHO05D002427 5.6e-09 65.5 129 33.3
COL.COLO4_07369 Corchorus olitorius HOM05D002284 ORTHO05D002427 9.5e-09 64.7 139 30.2
Glyma.02G016200 Glycine max HOM05D002284 ORTHO05D002427 9.5e-09 64.7 129 33.3
HanXRQChr04g0105451 Helianthus annuus HOM05D002284 ORTHO05D002427 9.5e-09 64.7 124 33.9
PSO384G1533 Papaver somniferum HOM05D002284 ORTHO05D002427 9.5e-09 64.7 116 36.2
Hund05447 Selenicereus undatus HOM05D002284 ORTHO05D002427 1.2e-08 64.3 165 30.9
AL4G47120 Arabidopsis lyrata HOM05D002284 ORTHO05D002427 1.6e-08 63.9 129 35.7
Medtr1g088110 Medicago truncatula HOM05D002284 ORTHO05D002427 1.6e-08 63.9 118 33.1
Hund23245 Selenicereus undatus HOM05D002284 ORTHO05D002427 1.6e-08 63.9 121 32.2
CARHR250480 Cardamine hirsuta HOM05D002284 ORTHO05D002427 2.1e-08 63.5 125 32.0
PSO832G3995 Papaver somniferum HOM05D002284 ORTHO05D002427 2.1e-08 63.5 114 36.8
Glyma.10G016700 Glycine max HOM05D002284 ORTHO05D002427 2.8e-08 63.2 139 30.9
Gohir.D11G118100 Gossypium hirsutum HOM05D002284 ORTHO05D002427 2.8e-08 63.2 137 30.7
Sc05g0003590 Simmondsia chinensis HOM05D002284 ORTHO05D002427 2.8e-08 63.2 79 41.8
TPR.G33986 Trifolium pratense HOM05D002284 ORTHO05D002427 2.8e-08 63.2 119 31.9
CSS0013482 Camellia sinensis var. sinensis HOM05D003009 ORTHO05D001701 6.2e-08 62.0 123 35.8
Aqoxy2G02879 Aquilegia oxysepala HOM05D002284 ORTHO05D002427 8.1e-08 61.6 127 32.3
Oeu064785.1 Olea europaea HOM05D003009 ORTHO05D001701 8.1e-08 61.6 121 36.4
Potri.002G201800 Populus trichocarpa HOM05D002284 ORTHO05D002427 8.1e-08 61.6 122 29.5
Lj1A1203T34 Lonicera japonica HOM05D003009 ORTHO05D001701 1.4e-07 60.8 132 34.1
Peaxi162Scf00001g00353 Petunia axillaris HOM05D002284 ORTHO05D002427 1.4e-07 60.8 134 33.6
Lj5g0016972 Lotus japonicus HOM05D002284 ORTHO05D002427 2.3e-07 60.1 122 32.8
Solyc02g078040.3 Solanum lycopersicum HOM05D003009 ORTHO05D001701 3.1e-07 59.7 123 33.3
Sopen02g022880 Solanum pennellii HOM05D003009 ORTHO05D001701 3.1e-07 59.7 123 33.3
Nitab4.5_0001652g0100 Nicotiana tabacum HOM05D003009 ORTHO05D001701 4.0e-07 59.3 130 33.1
Phvul.007G218200 Phaseolus vulgaris HOM05D002284 ORTHO05D002427 4.0e-07 59.3 145 28.3
Gohir.A11G113050 Gossypium hirsutum HOM05D002284 ORTHO05D002427 5.2e-07 58.9 137 29.9
Sc24g0003650 Simmondsia chinensis HOM05D002284 ORTHO05D002427 5.2e-07 58.9 139 29.5
VMungo0720G1206 Vigna mungo HOM05D002284 ORTHO05D002427 5.2e-07 58.9 131 31.3
COL.COLO4_07378 Corchorus olitorius HOM05D002284 ORTHO05D002427 6.8e-07 58.5 143 28.7
Duzib213G0647 Durio zibethinus HOM05D002284 ORTHO05D002427 6.8e-07 58.5 136 31.6
GSVIVG01028048001 Vitis vinifera HOM05D002284 ORTHO05D002427 6.8e-07 58.5 120 34.2
Nitab4.5_0000116g0320 Nicotiana tabacum HOM05D002284 ORTHO05D002427 8.9e-07 58.2 172 29.7
Sc24g0003820 Simmondsia chinensis HOM05D002284 ORTHO05D002427 8.9e-07 58.2 139 28.8
PGSC0003DMG400029700 Solanum tuberosum HOM05D003009 ORTHO05D001701 8.9e-07 58.2 127 32.3
Lj5g0027666 Lotus japonicus HOM05D002284 ORTHO05D002427 1.2e-06 57.8 127 29.9
MBI19_g30018_MAGBIO Magnolia biondii HOM05D002284 ORTHO05D002427 1.2e-06 57.8 129 33.3
Glyma.10G016600 Glycine max HOM05D002284 ORTHO05D002427 1.5e-06 57.4 141 30.5
Haze_04977 Corylus avellana HOM05D002284 ORTHO05D002427 2.0e-06 57.0 128 28.9
Cfa005872 Carpinus fangiana HOM05D002284 ORTHO05D002427 2.6e-06 56.6 118 30.5
Cfa005873 Carpinus fangiana HOM05D002284 ORTHO05D002427 2.6e-06 56.6 118 30.5
Aqoxy2G03141 Aquilegia oxysepala HOM05D002284 ORTHO05D002427 7.5e-06 55.1 121 32.2


User provided reference genes

Program Settings