Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025524 Chenopodium quinoa HOM05D001332 ORTHO05D001894 3.2e-34 147.9 77 100.0
AUR62000623 Chenopodium quinoa HOM05D001332 ORTHO05D001894 5.7e-15 84.0 49 87.8
AUR62006976 Chenopodium quinoa HOM05D001332 ORTHO05D001894 5.7e-15 84.0 49 87.8
AUR62025573 Chenopodium quinoa HOM05D001332 ORTHO05D001894 2.8e-14 81.6 65 66.2
EL10Ac4g09746 Beta vulgaris HOM05D001332 ORTHO05D001894 2.4e-13 78.6 49 81.6
Ah.02g118260 Amaranthus hybridus HOM05D001332 ORTHO05D001894 1.5e-12 75.9 47 78.7
Hund21760 Selenicereus undatus HOM05D001332 ORTHO05D001894 1.7e-11 72.4 47 76.6
Sc16g0009830 Simmondsia chinensis HOM05D001332 ORTHO05D001894 3.8e-11 71.2 47 72.3
MSTRG.23237 Avicennia marina HOM05D001332 ORTHO05D001894 1.9e-10 68.9 46 73.9
TAR628G0149 Trochodendron aralioides HOM05D001332 ORTHO05D001894 1.9e-10 68.9 49 71.4
Actinidia36584 Actinidia chinensis HOM05D001332 ORTHO05D001894 4.2e-10 67.8 46 73.9
Haze_19350 Corylus avellana HOM05D001332 ORTHO05D001894 4.2e-10 67.8 49 71.4
QL10p037230 Quercus lobata HOM05D001332 ORTHO05D001894 4.2e-10 67.8 49 69.4
QL10p038097 Quercus lobata HOM05D001332 ORTHO05D001894 4.2e-10 67.8 49 69.4
THA.LOC104819478 Tarenaya hassleriana HOM05D001332 ORTHO05D001894 4.2e-10 67.8 49 69.4
Potri.004G134066 Populus trichocarpa HOM05D001332 ORTHO05D001894 5.5e-10 67.4 49 69.4
Atru.chr3.1473 Acer truncatum HOM05D001332 ORTHO05D001894 7.2e-10 67.0 46 71.7
Dinv04535 Davidia involucrata HOM05D001332 ORTHO05D001894 7.2e-10 67.0 46 69.6
vmacro17790 Vaccinium macrocarpon HOM05D001332 ORTHO05D001894 7.2e-10 67.0 46 71.7
CSS0000159 Camellia sinensis var. sinensis HOM05D001332 ORTHO05D001894 9.4e-10 66.6 46 71.7
CiPaw.16G119200 Carya illinoinensis HOM05D001332 ORTHO05D001894 9.4e-10 66.6 49 65.3
TWI31G0340 Tripterygium wilfordii HOM05D001332 ORTHO05D001894 1.2e-09 66.2 46 71.7
GSVIVG01000239001 Vitis vinifera HOM05D001332 ORTHO05D001894 1.6e-09 65.9 49 65.3
CDE04G1088 Ceratophyllum demersum HOM05D001332 ORTHO05D001894 2.1e-09 65.5 49 63.3
Ciclev10026677m.g Citrus clementina HOM05D001332 ORTHO05D001894 2.1e-09 65.5 46 71.7
Haze_07710 Corylus avellana HOM05D000001 ORTHO05D000003 2.1e-09 65.5 50 66.0
Rhsim08G0128700 Rhododendron simsii HOM05D001332 ORTHO05D001894 2.1e-09 65.5 46 71.7
FAN16G1064 Fragaria x ananassa HOM05D001332 ORTHO05D001894 2.7e-09 65.1 48 66.7
TWI31G0984 Tripterygium wilfordii HOM05D001332 ORTHO05D001894 2.7e-09 65.1 50 70.0
Migut.H02538 Erythranthe guttata HOM05D001332 ORTHO05D001894 3.6e-09 64.7 46 67.4
Eucgr.I00015 Eucalyptus grandis HOM05D001332 ORTHO05D001894 3.6e-09 64.7 46 71.7
Aa31LG1G20550 Aethionema arabicum HOM05D000923 ORTHO05D000720 4.6e-09 64.3 46 71.7
SalBow8G0886 Salvia bowleyana HOM05D021639 ORTHO05D001894 4.6e-09 64.3 46 69.6
SalBow8G0934 Salvia bowleyana HOM05D021639 ORTHO05D001894 4.6e-09 64.3 46 69.6
Sp1g03100 Schrenkiella parvula HOM05D001332 ORTHO05D001894 4.6e-09 64.3 49 63.3
Cc00_g04340 Coffea canephora HOM05D001332 ORTHO05D001894 7.9e-09 63.5 46 67.4
Prupe.4G104800 Prunus persica HOM05D001332 ORTHO05D001894 7.9e-09 63.5 48 64.6
Prupe.4G105000 Prunus persica HOM05D001332 ORTHO05D001894 7.9e-09 63.5 48 64.6
PGR119G0336 Punica granatum HOM05D001332 ORTHO05D001894 7.9e-09 63.5 49 63.3
Thecc.01G147300 Theobroma cacao HOM05D001332 ORTHO05D001894 1.0e-08 63.2 49 65.3
Duzib147G0745 Durio zibethinus HOM05D001332 ORTHO05D001894 1.4e-08 62.8 49 65.3
BcaC05g24455 Brassica carinata HOM05D001332 ORTHO05D001894 1.8e-08 62.4 49 63.3
C05p02480 Brassica napus HOM05D001332 ORTHO05D001894 1.8e-08 62.4 49 63.3
BolC5t29027H Brassica oleracea HOM05D001332 ORTHO05D001894 1.8e-08 62.4 49 63.3
FvH4_3g11670 Fragaria vesca HOM05D001332 ORTHO05D001894 1.8e-08 62.4 46 67.4
Manes.13G153200 Manihot esculenta HOM05D001332 ORTHO05D001894 1.8e-08 62.4 49 65.3
A10p02690 Brassica napus HOM05D001332 ORTHO05D001894 2.3e-08 62.0 49 63.3
BraA10t42538Z Brassica rapa HOM05D001332 ORTHO05D001894 2.3e-08 62.0 49 63.3
BcaC07g36921 Brassica carinata HOM05D001332 ORTHO05D001894 3.0e-08 61.6 49 61.2
Cpa.g.sc138.30 Carica papaya HOM05D001332 ORTHO05D001894 3.0e-08 61.6 49 65.3
Nitab4.5_0006242g0010 Nicotiana tabacum HOM05D001332 ORTHO05D001894 3.0e-08 61.6 46 67.4
Peaxi162Scf00525g00618 Petunia axillaris HOM05D001332 ORTHO05D001894 3.0e-08 61.6 46 67.4
unitig_899.g14978 Utricularia gibba HOM05D000916 ORTHO05D008340 3.0e-08 61.6 46 63.0
GSVIVG01000240001 Vitis vinifera HOM05D001332 ORTHO05D001894 3.0e-08 61.6 49 63.3
PSO210G2973 Papaver somniferum HOM05D001332 ORTHO05D001894 3.9e-08 61.2 49 59.2
PSO210G4437 Papaver somniferum HOM05D001332 ORTHO05D001894 3.9e-08 61.2 49 59.2
Prupe.5G159500 Prunus persica HOM05D001332 ORTHO05D001894 3.9e-08 61.2 48 58.3
AL1G13890 Arabidopsis lyrata HOM05D001332 ORTHO05D001894 5.1e-08 60.8 49 61.2
Thhalv10008953m.g Eutrema salsugineum HOM05D001332 ORTHO05D001894 5.1e-08 60.8 49 61.2
Glyma.04G204300 Glycine max HOM05D001332 ORTHO05D001894 5.1e-08 60.8 51 64.7
Nn1g08391 Nelumbo nucifera HOM05D001332 ORTHO05D001894 5.1e-08 60.8 47 61.7
Nn5g27744 Nelumbo nucifera HOM05D001332 ORTHO05D001894 5.1e-08 60.8 47 61.7
Nitab4.5_0000905g0100 Nicotiana tabacum HOM05D001332 ORTHO05D001894 5.1e-08 60.8 46 67.4
Solyc09g005390.3 Solanum lycopersicum HOM05D001332 ORTHO05D001894 5.1e-08 60.8 46 67.4
PGSC0003DMG400023081 Solanum tuberosum HOM05D001332 ORTHO05D001894 6.7e-08 60.5 46 65.2
AT1G04290 Arabidopsis thaliana HOM05D001332 ORTHO05D001894 8.8e-08 60.1 49 61.2
Nn5g27745 Nelumbo nucifera HOM05D001332 ORTHO05D001894 8.8e-08 60.1 49 61.2
SEGI_17469 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 8.8e-08 60.1 46 63.0
SEGI_33501 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 8.8e-08 60.1 46 63.0
VMungo1309G1682 Vigna mungo HOM05D001332 ORTHO05D001894 8.8e-08 60.1 51 64.7
Carub.0001s0348 Capsella rubella HOM05D001332 ORTHO05D001894 1.1e-07 59.7 46 63.0
CARHR003620 Cardamine hirsuta HOM05D001332 ORTHO05D001894 1.1e-07 59.7 49 59.2
Aa31LG2G2660 Aethionema arabicum HOM05D001332 ORTHO05D001894 1.5e-07 59.3 46 63.0
MD05G1260500 Malus domestica HOM05D001332 ORTHO05D001894 1.5e-07 59.3 48 62.5
Sabra04G0084100 Salix brachista HOM05D001332 ORTHO05D001894 1.5e-07 59.3 49 63.3
CANSAT54G2298 Cannabis sativa HOM05D001332 ORTHO05D001894 2.0e-07 58.9 42 64.3
Duzib264G0962 Durio zibethinus HOM05D001332 ORTHO05D001894 2.0e-07 58.9 49 61.2
Sopen09g001340 Solanum pennellii HOM05D001332 ORTHO05D001894 2.0e-07 58.9 46 65.2
Lj4A820T48 Lonicera japonica HOM05D001332 ORTHO05D001894 2.6e-07 58.5 46 65.2
Nitab4.5_0000835g0020 Nicotiana tabacum HOM05D001332 ORTHO05D001894 4.4e-07 57.8 46 63.0
Dinv20721 Davidia involucrata HOM05D001332 ORTHO05D001894 5.7e-07 57.4 46 60.9
Thecc.01G147500 Theobroma cacao HOM05D001332 ORTHO05D001894 5.7e-07 57.4 49 55.1
Aqoxy6G00133 Aquilegia oxysepala HOM05D001332 ORTHO05D001894 7.4e-07 57.0 49 55.1
Gohir.A11G058700 Gossypium hirsutum HOM05D001332 ORTHO05D001894 7.4e-07 57.0 46 58.7
Gorai.007G067900 Gossypium raimondii HOM05D001332 ORTHO05D001894 7.4e-07 57.0 46 58.7
ClCG02G000220 Citrullus lanatus HOM05D001332 ORTHO05D001894 9.7e-07 56.6 49 59.2
SGA_v2.0_scaffold51G18838 Striga asiatica HOM05D001332 ORTHO05D001894 9.7e-07 56.6 46 58.7
MD10G1239800 Malus domestica HOM05D001332 ORTHO05D001894 1.7e-06 55.8 48 60.4
Duzib187G1216 Durio zibethinus HOM05D001332 ORTHO05D001894 2.2e-06 55.5 49 57.1
Gohir.D11G062900 Gossypium hirsutum HOM05D001332 ORTHO05D001894 2.2e-06 55.5 46 56.5
Phvul.009G160000 Phaseolus vulgaris HOM05D001332 ORTHO05D001894 2.2e-06 55.5 51 60.8
Hma1.2p1_0296F.1_g116940 Hydrangea macrophylla HOM05D001332 ORTHO05D001894 2.8e-06 55.1 47 59.6
PGR102G3087 Punica granatum HOM05D001332 ORTHO05D001894 2.8e-06 55.1 44 61.4
ECA238G3031 Erigeron canadensis HOM05D001332 ORTHO05D001894 3.7e-06 54.7 47 61.7
Lj1g0011871 Lotus japonicus HOM05D001332 ORTHO05D001894 3.7e-06 54.7 51 60.8
SEGI_37226 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 3.7e-06 54.7 46 56.5
Cc00_g04370 Coffea canephora HOM05D001332 ORTHO05D001894 4.8e-06 54.3 42 64.3
DCAR_009618 Daucus carota HOM05D001332 ORTHO05D001894 4.8e-06 54.3 47 57.4
Lalb_Chr23g0272781 Lupinus albus HOM05D001332 ORTHO05D001894 4.8e-06 54.3 51 60.8
Ca_17039_v3 Cicer arietinum L. HOM05D001332 ORTHO05D001894 6.3e-06 53.9 51 54.9
HanXRQChr13g0394841 Helianthus annuus HOM05D001332 ORTHO05D001894 6.3e-06 53.9 47 63.8
A02p25760 Brassica napus HOM05D001332 ORTHO05D001894 8.2e-06 53.5 44 59.1
MELO3C023210.2 Cucumis melo HOM05D001332 ORTHO05D001894 8.2e-06 53.5 49 55.1
Lalb_Chr11g0068901 Lupinus albus HOM05D001332 ORTHO05D001894 8.2e-06 53.5 51 56.9


User provided reference genes

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