Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025521 Chenopodium quinoa HOM05D000429 ORTHO05D000880 9.7e-80 300.1 149 100.0
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 7.8e-21 104.4 145 37.9
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 3.0e-20 102.4 145 37.9
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 8.7e-20 100.9 145 37.2
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-17 93.6 145 36.6
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-17 93.6 145 36.6
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 1.8e-17 93.2 145 36.6
Ah.04g156040 Amaranthus hybridus HOM05D009849 ORTHO05D000880 3.1e-17 92.4 146 34.9
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 5.3e-17 91.7 145 36.6
VMungo0720G2302 Vigna mungo HOM05D008322 ORTHO05D000880 2.0e-16 89.7 132 34.8
Ah.01g005090 Amaranthus hybridus HOM05D009930 ORTHO05D012156 2.6e-16 89.4 138 36.2
AUR62034883 Chenopodium quinoa HOM05D009849 ORTHO05D012324 2.6e-16 89.4 147 36.1
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 2.6e-16 89.4 139 36.0
MBI18_g41471_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.5e-16 88.6 148 30.4
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 4.9e-15 85.1 148 34.5
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 8.4e-15 84.3 138 32.6
Oeu018352.1 Olea europaea HOM05D003069 ORTHO05D000880 3.2e-14 82.4 143 33.6
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 4.2e-14 82.0 148 32.4
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 5.4e-14 81.6 137 33.6
TWI79G0108 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 1.2e-13 80.5 142 35.2
Sc11g0004310 Simmondsia chinensis HOM05D001436 ORTHO05D000880 2.7e-13 79.3 143 34.3
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 3.5e-13 79.0 119 36.1
Ah.15g097900 Amaranthus hybridus HOM05D000429 ORTHO05D000880 7.9e-13 77.8 121 35.5
TWI38G2319 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.9e-13 77.8 142 35.2
Oeu033343.1 Olea europaea HOM05D001436 ORTHO05D000880 1.3e-12 77.0 148 31.8
Ah.15g098360 Amaranthus hybridus HOM05D016717 ORTHO05D000880 2.3e-12 76.3 121 34.7
TWI36G0153 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.0e-12 75.9 142 33.8
TWI39G0468 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.0e-12 75.9 142 33.8
HanXRQChr10g0279851 Helianthus annuus HOM05D000047 ORTHO05D000044 3.9e-12 75.5 130 34.6
VMungo0331G1331 Vigna mungo HOM05D008322 ORTHO05D000880 3.9e-12 75.5 105 36.2
TWI34G1687 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.7e-12 74.3 142 33.1
HanXRQChr10g0289431 Helianthus annuus HOM05D000429 ORTHO05D000880 1.5e-11 73.6 130 34.6
ECA232G2642 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.9e-11 73.2 121 35.5
VMungo0720G1635 Vigna mungo HOM05D008322 ORTHO05D000880 1.9e-11 73.2 107 33.6
ECA238G3517 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.5e-11 72.8 132 31.8
FvH4_3g17101 Fragaria vesca HOM05D000429 ORTHO05D000352 3.3e-11 72.4 135 30.4
HanXRQChr13g0387201 Helianthus annuus HOM05D000047 ORTHO05D000044 3.3e-11 72.4 134 29.1
MBI14_g31656_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.3e-11 72.4 137 27.7
TWI74G0379 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 4.3e-11 72.0 130 34.6
VMungo0251G0875 Vigna mungo HOM05D008322 ORTHO05D000880 4.3e-11 72.0 105 34.3
VMungo0331G0341 Vigna mungo HOM05D000429 ORTHO05D002449 4.3e-11 72.0 130 31.5
ECA236G2446 Erigeron canadensis HOM05D000429 ORTHO05D000880 5.6e-11 71.6 121 35.5
arahy.Tifrunner.gnm1.ann1.6D2RJL Arachis hypogaea HOM05D000429 ORTHO05D000880 7.4e-11 71.2 119 33.6
arahy.Tifrunner.gnm1.ann1.W6UN1E Arachis hypogaea HOM05D003069 ORTHO05D000880 7.4e-11 71.2 134 30.6
TWI38G0384 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 9.6e-11 70.9 139 32.4
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.3e-10 70.5 132 31.1
ECA246G2481 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.3e-10 70.5 121 34.7
VMungo1127G1971 Vigna mungo HOM05D008322 ORTHO05D000880 1.3e-10 70.5 119 31.9
ECA232G4305 Erigeron canadensis HOM05D000047 ORTHO05D000352 1.6e-10 70.1 142 32.4
TWI18G0663 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-10 70.1 130 34.6
ECA097G0001 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.1e-10 69.7 132 34.1
ECA232G1319 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-10 69.7 141 33.3
ECA240G3470 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.1e-10 69.7 121 33.9
EL10As9g23929 Beta vulgaris HOM05D000429 ORTHO05D000880 2.8e-10 69.3 131 33.6
ECA236G3805 Erigeron canadensis HOM05D000006 ORTHO05D000352 2.8e-10 69.3 121 34.7
ECA238G3793 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.8e-10 69.3 121 37.2
ECA240G2638 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.8e-10 69.3 140 29.3
ECA233G5499 Erigeron canadensis HOM05D000006 ORTHO05D000352 3.7e-10 68.9 121 34.7
ECA234G4448 Erigeron canadensis HOM05D000429 ORTHO05D000880 4.8e-10 68.6 121 33.9
ECA246G0488 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.8e-10 68.6 121 33.9
ECA247G2301 Erigeron canadensis HOM05D000006 ORTHO05D000044 4.8e-10 68.6 121 33.9
TWI18G0159 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 4.8e-10 68.6 130 33.8
VMungo1383G2714 Vigna mungo HOM05D008322 ORTHO05D000880 6.2e-10 68.2 110 32.7
TPR.G38533 Trifolium pratense HOM05D009653 ORTHO05D011212 8.1e-10 67.8 137 29.9
ECA238G3134 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.1e-09 67.4 121 33.1
ECA247G2502 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-09 67.4 121 33.1
ECA232G3359 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.4e-09 67.0 115 34.8
ECA236G1050 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.4e-09 67.0 121 33.9
TWI53G0621 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-09 67.0 130 33.1
VMungo0540G1972 Vigna mungo HOM05D008322 ORTHO05D000880 1.4e-09 67.0 119 27.7
PSO339G3032 Papaver somniferum HOM05D000429 ORTHO05D002449 1.8e-09 66.6 142 28.9
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 2.4e-09 66.2 110 31.8
ECA236G2083 Erigeron canadensis HOM05D000429 ORTHO05D000352 3.1e-09 65.9 121 33.1
ECA232G1596 Erigeron canadensis HOM05D000429 ORTHO05D000352 5.3e-09 65.1 121 33.9
VMungo1215G2996 Vigna mungo HOM05D008322 ORTHO05D000880 5.3e-09 65.1 104 31.7
ECA240G0491 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-09 64.7 121 34.7
Manes.14G158232 Manihot esculenta HOM05D000429 ORTHO05D000880 6.9e-09 64.7 135 31.1
ECA232G3043 Erigeron canadensis HOM05D000429 ORTHO05D000352 9.0e-09 64.3 121 31.4
EL10Ac6g14327 Beta vulgaris HOM05D013686 ORTHO05D000880 1.5e-08 63.5 128 30.5
ECA232G1486 Erigeron canadensis HOM05D000429 ORTHO05D000352 2.0e-08 63.2 121 32.2
ECA240G3315 Erigeron canadensis HOM05D000033 ORTHO05D001317 2.0e-08 63.2 121 30.6
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.4e-08 62.4 123 27.6
MBI11_g00240_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.5e-08 62.0 146 26.7
ECA232G3051 Erigeron canadensis HOM05D001690 ORTHO05D002627 7.6e-08 61.2 123 29.3
CANSAT21G0196 Cannabis sativa HOM05D000429 ORTHO05D000880 9.9e-08 60.8 133 29.3
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 9.9e-08 60.8 126 30.2
PSO782G4542 Papaver somniferum HOM05D000429 ORTHO05D002449 9.9e-08 60.8 141 27.0
TWI38G1491 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-07 60.5 118 32.2
TWI39G1108 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-07 60.5 134 32.1
Ah.01g016560 Amaranthus hybridus HOM05D016717 ORTHO05D000352 1.7e-07 60.1 142 28.9
Ah.01g016570 Amaranthus hybridus HOM05D016717 ORTHO05D000352 1.7e-07 60.1 142 28.9
Ah.04g155420 Amaranthus hybridus HOM05D009930 ORTHO05D012156 1.7e-07 60.1 130 31.5
ECA232G1836 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.7e-07 60.1 117 30.8
ECA233G0268 Erigeron canadensis HOM05D000047 ORTHO05D002578 2.2e-07 59.7 135 26.7
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 2.2e-07 59.7 90 35.6
TPR.G34595 Trifolium pratense HOM05D000429 ORTHO05D000880 2.2e-07 59.7 110 31.8
TWI59G1479 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.9e-07 59.3 118 32.2
PSO198G0005 Papaver somniferum HOM05D000429 ORTHO05D002449 3.8e-07 58.9 131 28.2
EL10Ac4g08314 Beta vulgaris HOM05D000429 ORTHO05D000880 4.9e-07 58.5 119 31.9
AUR62020139 Chenopodium quinoa HOM05D009849 ORTHO05D012324 4.9e-07 58.5 69 44.9
TWI38G1677 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.9e-07 58.5 118 32.2
EL10Ac2g02650 Beta vulgaris HOM05D000429 ORTHO05D000880 6.4e-07 58.2 119 31.9
Lj5g0013972 Lotus japonicus HOM05D000429 ORTHO05D002578 6.4e-07 58.2 117 26.5
Oeu003844.1 Olea europaea HOM05D001436 ORTHO05D000880 6.4e-07 58.2 99 34.3
AUR62044536 Chenopodium quinoa HOM05D009849 ORTHO05D012324 8.4e-07 57.8 69 44.9
TWI14G1011 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.4e-07 57.8 118 31.4
EL10Ac3g07041 Beta vulgaris HOM05D000429 ORTHO05D000880 1.1e-06 57.4 119 31.1
EL10Ac6g14450 Beta vulgaris HOM05D000429 ORTHO05D000880 1.1e-06 57.4 119 31.1
MBI08_g23489_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.1e-06 57.4 127 29.1
PSO478G3465 Papaver somniferum HOM05D000429 ORTHO05D002449 1.1e-06 57.4 142 26.1
VMungo1127G1609 Vigna mungo HOM05D008322 ORTHO05D000880 1.1e-06 57.4 77 33.8
EL10Ac9g22487 Beta vulgaris HOM05D000429 ORTHO05D000880 1.4e-06 57.0 119 31.1
ECA246G0195 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.4e-06 57.0 111 33.3
PSO210G5622 Papaver somniferum HOM05D000429 ORTHO05D002449 1.4e-06 57.0 131 27.5
PSO339G2401 Papaver somniferum HOM05D000429 ORTHO05D000352 1.4e-06 57.0 126 28.6
VMungo1215G0382 Vigna mungo HOM05D008322 ORTHO05D000880 1.4e-06 57.0 80 33.8
MBI18_g34712_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.9e-06 56.6 148 27.7
PSO339G1298 Papaver somniferum HOM05D000429 ORTHO05D002449 1.9e-06 56.6 131 25.2
VMungo0647G1139 Vigna mungo HOM05D008322 ORTHO05D000880 1.9e-06 56.6 103 29.1
VMungo1127G1057 Vigna mungo HOM05D008322 ORTHO05D000880 1.9e-06 56.6 68 36.8
EL10As19g24191 Beta vulgaris HOM05D000429 ORTHO05D000880 2.4e-06 56.2 119 31.1
ECA247G2815 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.4e-06 56.2 124 31.5
AUR62025877 Chenopodium quinoa HOM05D009849 ORTHO05D012324 3.2e-06 55.8 73 41.1
VMungo0251G1197 Vigna mungo HOM05D000207 ORTHO05D004956 3.2e-06 55.8 87 33.3
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.2e-06 55.5 126 27.0
CSS0016793 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 4.2e-06 55.5 126 27.0
ECA232G0020 Erigeron canadensis HOM05D001690 ORTHO05D002578 4.2e-06 55.5 140 23.6
PSO541G2128 Papaver somniferum HOM05D000429 ORTHO05D002449 4.2e-06 55.5 131 29.0
VMungo0464G0446 Vigna mungo HOM05D008322 ORTHO05D000880 4.2e-06 55.5 116 26.7
CSS0004875 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.5e-06 55.1 126 27.8
CSS0009240 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 5.5e-06 55.1 124 27.4
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.5e-06 55.1 126 27.8
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.5e-06 55.1 126 27.8
ECA240G1170 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.5e-06 55.1 130 33.1
SGA_v2.0_scaffold245G44675 Striga asiatica HOM05D000429 ORTHO05D002449 5.5e-06 55.1 84 36.9
VMungo0464G0824 Vigna mungo HOM05D008322 ORTHO05D000880 5.5e-06 55.1 72 33.3
CSS0003738 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 7.1e-06 54.7 126 27.0
CSS0007125 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 7.1e-06 54.7 126 27.0
CSS0038357 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 7.1e-06 54.7 83 36.1
CSS0047560 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 7.1e-06 54.7 126 27.0
BolC8t47948H Brassica oleracea HOM05D000429 ORTHO05D000880 9.3e-06 54.3 98 34.7
MBI11_g22735_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 9.3e-06 54.3 115 28.7
PSO017G0797 Papaver somniferum HOM05D000429 ORTHO05D002449 9.3e-06 54.3 127 26.8
PSO675G8090 Papaver somniferum HOM05D000429 ORTHO05D002449 9.3e-06 54.3 131 29.8


User provided reference genes

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