Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025492 Chenopodium quinoa HOM05D000017 ORTHO05D000013 2.0e-149 532.3 261 100.0
AUR62042802 Chenopodium quinoa HOM05D000017 ORTHO05D000013 3.7e-74 282.3 181 76.2
EL10Ac5g13044 Beta vulgaris HOM05D000017 ORTHO05D000013 3.8e-71 272.3 203 66.5
AUR62036985 Chenopodium quinoa HOM05D000017 ORTHO05D000013 5.3e-65 251.9 247 51.8
EL10Ac1g02179 Beta vulgaris HOM05D000017 ORTHO05D000013 5.0e-63 245.4 204 57.8
AUR62007535 Chenopodium quinoa HOM05D002375 ORTHO05D002457 4.0e-60 235.7 237 57.4
EL10Ac7g17478 Beta vulgaris HOM05D000017 ORTHO05D000013 2.2e-58 229.9 149 73.8
Hma1.2p1_0026F.1_g016405 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-20 102.4 254 30.7
Hma1.2p1_0292F.1_g115670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-20 102.4 254 30.7
Hma1.2p1_1314F.1_g275035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-20 102.4 254 30.7
Hma1.2p1_1102F.1_g257230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.8e-19 98.2 157 34.4
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-18 97.8 186 31.2
Hma1.2p1_2684F.1_g326900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-18 96.3 157 35.0
Hma1.2p1_0257F.1_g103480 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-18 95.5 191 32.5
Hma1.2p1_2904F.1_g330080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-17 94.7 234 28.2
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-17 94.0 194 33.0
Hma1.2p1_2048F.1_g312460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-17 94.0 234 28.2
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-17 92.8 173 34.1
Hma1.2p1_0675F.1_g201770 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-17 92.4 196 29.6
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-16 90.5 173 34.1
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-16 90.1 194 32.5
Hma1.2p1_0068F.1_g037160 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.0e-16 89.0 148 34.5
FvH4_1g10043 Fragaria vesca HOM05D000017 ORTHO05D000013 7.8e-16 88.6 193 30.1
Hma1.2p1_0184F.1_g081220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-15 88.2 196 29.1
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-15 88.2 162 34.6
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-15 88.2 162 34.6
Hma1.2p1_0436F.1_g152740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-15 87.8 195 29.2
TWI31G0311 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-15 87.8 209 30.1
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-15 87.4 155 34.8
Hma1.2p1_0408F.1_g146530 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-15 87.0 196 29.1
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.0e-15 86.7 162 31.5
QL04p037370 Quercus lobata HOM05D000017 ORTHO05D000013 3.9e-15 86.3 156 30.1
QL11p032217 Quercus lobata HOM05D000017 ORTHO05D000013 3.9e-15 86.3 156 30.1
Hma1.2p1_0936F.1_g238946 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.6e-15 85.1 242 28.1
Hma1.2p1_0936F.1_g238949 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.6e-15 85.1 242 28.1
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-14 84.7 197 31.5
CANSAT56G2167 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-14 84.3 159 31.4
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-14 84.3 161 29.8
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-14 84.0 158 31.6
Rhsim05G0162200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-14 84.0 166 30.7
TWI79G0005 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-14 84.0 212 31.1
Prupe.4G046500 Prunus persica HOM05D000017 ORTHO05D000013 2.5e-14 83.6 196 28.6
CANSAT64G2354 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-14 83.2 198 26.3
Hma1.2p1_2860F.1_g329530 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-14 83.2 246 28.9
TWI74G0765 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.3e-14 82.8 223 30.9
Hma1.2p1_0327F.1_g126370 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.6e-14 82.4 156 28.2
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.6e-14 82.4 195 27.2
Hma1.2p1_1104F.1_g257420 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.5e-14 81.6 199 27.6
TWI09G1229 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.5e-14 81.6 200 31.0
CANSAT25G3367 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-13 81.3 159 30.8
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 1.6e-13 80.9 177 30.5
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-13 80.5 194 27.8
TWI59G0255 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-13 80.5 208 28.4
Hma1.2p1_0593F.1_g185740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-13 79.7 118 34.7
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-13 79.7 203 28.6
Atru.chr6.3056 Acer truncatum HOM05D000017 ORTHO05D000013 4.7e-13 79.3 233 28.3
Hma1.2p1_0327F.1_g126250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-12 78.2 188 30.9
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-12 78.2 160 28.1
TWI77G0979 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-12 78.2 190 28.9
Hma1.2p1_0138F.1_g062980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.0e-12 76.3 139 29.5
Hma1.2p1_0429F.1_g151110 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-12 75.9 242 26.9
Rhsim08G0208800 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.2e-12 75.9 186 28.5
Hma1.2p1_0224F.1_g094540 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-12 75.5 195 24.6
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.8e-12 75.5 164 29.9
PGR031G3483 Punica granatum HOM05D000017 ORTHO05D000013 8.9e-12 75.1 190 28.4
PGR067G0005 Punica granatum HOM05D000017 ORTHO05D000013 8.9e-12 75.1 190 28.4
Rhsim07G0160300 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.9e-12 75.1 193 31.1
Hma1.2p1_1816F.1_g303950 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-11 74.7 160 27.5
Os06g0704400 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 1.2e-11 74.7 197 28.4
Rhsim04G0080400 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-11 74.7 216 27.8
Rhsim01G0063200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.5e-11 74.3 189 25.9
Nitab4.5_0022071g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.6e-11 73.6 194 28.4
Prupe.7G029200 Prunus persica HOM05D000017 ORTHO05D000013 2.6e-11 73.6 215 25.1
Dinv40841 Davidia involucrata HOM05D014922 ORTHO05D022493 3.4e-11 73.2 122 31.1
Rhsim02G0014700 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.4e-11 72.8 188 27.1
CANSAT56G1226 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-11 72.4 157 28.7
CANSAT25G0975 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-11 71.6 159 25.8
ECA246G1830 Erigeron canadensis HOM05D000017 ORTHO05D012102 9.9e-11 71.6 165 29.1
Rhsim02G0197700 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.9e-11 71.6 120 30.8
CANSAT54G2672 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-10 71.2 197 28.4
TWI81G0891 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-10 70.9 204 29.4
CANSAT21G0768 Cannabis sativa HOM05D000017 ORTHO05D000013 2.9e-10 70.1 142 26.1
Dinv07982 Davidia involucrata HOM05D020770 ORTHO05D017900 2.9e-10 70.1 165 26.7
VMungo0647G1632 Vigna mungo HOM05D008773 ORTHO05D009934 2.9e-10 70.1 154 31.8
COL.COLO4_19545 Corchorus olitorius HOM05D010554 ORTHO05D012512 3.8e-10 69.7 177 25.4
TWI15G0063 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-10 69.7 170 28.2
Ca_26364_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 8.4e-10 68.6 217 25.8
CANSAT01G2010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-09 68.2 168 31.0
Ca_13615_v3 Cicer arietinum L. HOM05D008773 ORTHO05D010496 1.1e-09 68.2 182 24.2
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-09 68.2 145 28.3
RcHm_v2.0_Chr3g0464961 Rosa chinensis HOM05D000017 ORTHO05D000013 1.1e-09 68.2 208 24.5
FvH4_2g04622 Fragaria vesca HOM05D008248 ORTHO05D010456 1.4e-09 67.8 165 30.3
Atru.chr3.1166 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-09 67.4 197 28.4
ECA234G0241 Erigeron canadensis HOM05D025506 ORTHO05D012102 1.9e-09 67.4 185 26.5
FvH4_1g28543 Fragaria vesca HOM05D000017 ORTHO05D000013 1.9e-09 67.4 188 28.7
PGR031G2330 Punica granatum HOM05D000017 ORTHO05D000013 1.9e-09 67.4 190 28.9
TWI15G0100 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-09 67.4 196 27.6
CANSAT21G2291 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-09 67.0 139 29.5
TWI15G0892 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.4e-09 67.0 197 26.9
Nitab4.5_0001817g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.2e-09 66.6 179 28.5
RcHm_v2.0_Chr2g0150401 Rosa chinensis HOM05D000017 ORTHO05D000013 3.2e-09 66.6 203 25.6
CANSAT80G0839 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-09 66.2 192 24.0
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-09 66.2 190 26.8
COL.COLO4_19621 Corchorus olitorius HOM05D013481 ORTHO05D015079 5.4e-09 65.9 147 29.3
TWI53G0252 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.1e-09 65.5 196 27.6
Atru.chr6.1342 Acer truncatum HOM05D000017 ORTHO05D000013 9.2e-09 65.1 134 31.3
Hma1.2p1_0003F.1_g003700 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.2e-09 65.1 173 27.7
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 9.2e-09 65.1 190 26.3
CAN.G113.6 Capsicum annuum HOM05D000017 ORTHO05D000013 1.2e-08 64.7 128 30.5
Dinv07615 Davidia involucrata HOM05D002859 ORTHO05D003120 1.2e-08 64.7 97 33.0
THA.LOC104802582 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.2e-08 64.7 179 27.9
AUR62030080 Chenopodium quinoa HOM05D009432 ORTHO05D011319 1.6e-08 64.3 172 27.3
ECA234G1268 Erigeron canadensis HOM05D000017 ORTHO05D003113 1.6e-08 64.3 195 25.6
ECA236G3294 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-08 64.3 213 23.9
Lj6C505T2 Lonicera japonica HOM05D015370 ORTHO05D000013 1.6e-08 64.3 126 34.1
Peaxi162Scf00107g01612 Petunia axillaris HOM05D003329 ORTHO05D001349 1.6e-08 64.3 172 28.5
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 1.6e-08 64.3 190 26.3
FvH4_5g30881 Fragaria vesca HOM05D009570 ORTHO05D009451 2.1e-08 63.9 203 24.1
THA.LOC104806013 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.1e-08 63.9 197 24.9
THA.LOC104821184 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.1e-08 63.9 197 24.4
BolC4t25917H Brassica oleracea HOM05D012975 ORTHO05D015956 4.6e-08 62.8 263 25.1
Nitab4.5_0001135g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-08 62.8 166 29.5
Rhsim13G0199100 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.6e-08 62.8 161 31.1
TWI53G1463 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.6e-08 62.8 133 30.8
PGR031G2551 Punica granatum HOM05D000017 ORTHO05D000013 6.0e-08 62.4 178 23.6
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.8e-08 62.0 186 25.3
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-07 61.6 150 28.0
CAN.G1273.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.3e-07 61.2 176 28.4
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 1.3e-07 61.2 146 28.8
ECA248G1483 Erigeron canadensis HOM05D000004 ORTHO05D012102 1.3e-07 61.2 96 32.3
THA.LOC104826793 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.3e-07 61.2 195 25.6
COL.COLO4_19203 Corchorus olitorius HOM05D010554 ORTHO05D012512 1.7e-07 60.8 184 25.0
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 1.7e-07 60.8 109 29.4
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-07 60.8 188 27.7
THA.LOC104800229 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-07 60.8 192 24.5
THA.LOC104825732 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-07 60.8 243 23.5
THA.LOC104811292 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.3e-07 60.5 192 25.0
CANSAT25G3827 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 60.1 176 23.9
Hma1.2p1_0257F.1_g103810 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.0e-07 60.1 273 24.2
RcHm_v2.0_Chr6g0276491 Rosa chinensis HOM05D000017 ORTHO05D000013 3.0e-07 60.1 237 23.6
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.9e-07 59.7 133 27.1
unitig_22.g5722 Utricularia gibba HOM05D024088 ORTHO05D026210 3.9e-07 59.7 123 35.0
CAN.G65.137 Capsicum annuum HOM05D000017 ORTHO05D010801 5.1e-07 59.3 180 28.9
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-07 59.3 196 25.5
Nitab4.5_0007514g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.6e-07 58.9 144 26.4
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 8.6e-07 58.5 123 31.7
THA.LOC104801928 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-06 58.2 90 33.3
THA.LOC104815408 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-06 58.2 132 28.0
THA.LOC104820572 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-06 58.2 138 26.1
TWI56G1085 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-06 58.2 210 26.7
Ca_26785_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.5e-06 57.8 183 24.0
Nitab4.5_0002550g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.5e-06 57.8 144 24.3
THA.LOC104803158 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.5e-06 57.8 129 27.1
FvH4_6g18391 Fragaria vesca HOM05D008248 ORTHO05D010456 1.9e-06 57.4 176 25.6
Peaxi162Scf00596g00210 Petunia axillaris HOM05D000017 ORTHO05D000308 1.9e-06 57.4 206 24.3
Hma1.2p1_1493F.1_g286800 Hydrangea macrophylla HOM05D000017 ORTHO05D014080 2.5e-06 57.0 132 28.8
ECA232G1326 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.3e-06 56.6 103 31.1
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 3.3e-06 56.6 175 28.0
THA.LOC104808385 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.3e-06 56.6 157 22.9
ECA238G0171 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.3e-06 56.2 220 22.3
Lj2g0013559 Lotus japonicus HOM05D000017 ORTHO05D000013 4.3e-06 56.2 176 29.0
Nitab4.5_0003178g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.3e-06 56.2 133 28.6
Rhsim01G0131900 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.3e-06 56.2 146 27.4
vmacro23167 Vaccinium macrocarpon HOM05D000018 ORTHO05D012347 4.3e-06 56.2 121 29.8
Aa31sc24G120 Aethionema arabicum HOM05D000017 ORTHO05D009795 7.3e-06 55.5 138 26.8
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.3e-06 55.5 204 25.0
vmacro23380 Vaccinium macrocarpon HOM05D007604 ORTHO05D008966 7.3e-06 55.5 148 25.7
COL.COLO4_17928 Corchorus olitorius HOM05D010554 ORTHO05D012512 9.6e-06 55.1 115 31.3
ECA232G4696 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.6e-06 55.1 90 33.3


User provided reference genes

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