Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 6.7e-232 807.0 409 100.0
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.6e-204 716.1 405 91.4
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.1e-168 595.5 406 77.3
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 9.0e-160 567.4 406 75.4
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.8e-155 553.1 406 70.9
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.0e-131 474.2 406 61.8
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 2.3e-107 393.3 413 51.1
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.5e-106 390.6 408 52.7
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 2.8e-105 386.3 408 52.0
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 3.7e-105 386.0 408 51.2
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 9.1e-104 381.3 411 50.4
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.6e-103 380.6 408 51.5
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 3.5e-103 379.4 408 50.5
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 3.5e-103 379.4 412 51.2
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 4.5e-103 379.0 408 51.0
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 4.5e-103 379.0 410 49.0
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 2.9e-102 376.3 407 50.6
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 1.9e-101 373.6 438 47.3
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 6.1e-100 368.6 412 49.0
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 2.3e-99 366.7 408 49.5
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 6.3e-97 358.6 407 49.4
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.8e-96 357.1 408 50.5
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 3.1e-96 356.3 406 48.0
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 4.1e-96 355.9 408 49.3
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 4.1e-96 355.9 408 49.5
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 9.1e-96 354.8 407 48.9
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 1.6e-95 354.0 405 49.1
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 5.9e-95 352.1 409 48.7
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.0e-94 351.3 409 47.9
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 1.7e-94 350.5 408 47.5
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 1.7e-94 350.5 346 56.9
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.1e-93 347.8 409 47.7
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 1.5e-93 347.4 408 48.8
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 1.9e-93 347.1 406 48.5
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 3.3e-93 346.3 408 47.3
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 5.5e-93 345.5 408 48.5
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 9.5e-93 344.7 408 48.5
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 9.5e-93 344.7 408 48.5
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.2e-92 344.4 408 48.8
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.8e-91 340.5 408 48.3
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 1.8e-91 340.5 408 48.3
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 2.3e-91 340.1 407 46.2
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.2e-90 337.8 407 46.4
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 2.0e-90 337.0 408 47.8
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 3.4e-90 336.3 407 46.2
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 5.7e-90 335.5 407 47.2
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.7e-89 334.0 410 48.0
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.1e-88 331.3 408 48.0
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.1e-88 331.3 408 46.6
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 9.2e-88 328.2 412 46.1
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 2.0e-87 327.0 407 47.2
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 5.9e-87 325.5 406 47.5
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.0e-86 324.7 450 44.4
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 2.3e-86 323.6 408 46.1
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 2.9e-86 323.2 409 45.2
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.1e-85 321.2 406 47.3
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 2.5e-85 320.1 395 46.8
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 5.6e-85 318.9 395 46.8
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 7.3e-85 318.5 409 45.2
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 1.6e-84 317.4 410 44.6
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 3.6e-84 316.2 406 46.1
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 3.6e-84 316.2 344 52.0
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 3.6e-84 316.2 409 46.9
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 8.0e-84 315.1 408 44.9
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.1e-83 313.2 410 44.4
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 4.0e-83 312.8 411 43.6
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 6.8e-83 312.0 413 45.3
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 2.6e-82 310.1 407 44.7
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 3.4e-82 309.7 410 45.1
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 9.8e-82 308.1 412 42.7
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.7e-81 307.4 337 50.7
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.1e-80 304.7 417 44.8
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 1.9e-80 303.9 500 38.2
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 2.4e-80 303.5 410 44.4
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 4.1e-80 302.8 408 45.8
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 2.7e-79 300.1 424 42.7
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 3.0e-78 296.6 407 44.0
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 3.3e-77 293.1 410 43.4
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 6.4e-73 278.9 342 47.7
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.4e-72 277.7 420 42.6
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 3.2e-72 276.6 333 49.5
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 2.3e-67 260.4 412 40.8
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 3.2e-64 250.0 292 46.9
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 7.8e-63 245.4 292 49.0
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 3.9e-62 243.0 412 37.9
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 5.8e-58 229.2 245 49.4
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 3.5e-55 219.9 293 47.1
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 3.2e-48 196.8 239 47.3
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 1.6e-47 194.5 348 36.5
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 5.6e-45 186.0 239 45.6
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 3.7e-36 156.8 276 39.5
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 9.6e-29 132.1 430 27.0
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 1.6e-28 131.3 406 30.5
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 1.0e-25 122.1 336 29.8
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 5.0e-25 119.8 179 40.8
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 7.2e-24 115.9 143 47.6
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.6e-23 114.8 151 44.4
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 1.3e-22 111.7 135 45.9
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 4.3e-21 106.7 151 43.7
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 1.6e-20 104.8 165 38.8
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 2.4e-19 100.9 122 47.5
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 5.5e-16 89.7 171 35.7
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 2.7e-15 87.4 124 41.9
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 4.6e-15 86.7 197 34.5
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 2.5e-13 80.9 118 39.8
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 4.8e-12 76.6 106 43.4
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 4.1e-11 73.6 83 45.8
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 4.5e-10 70.1 109 39.4
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 4.5e-10 70.1 90 44.4
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 3.2e-08 63.9 74 35.1


User provided reference genes

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