Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.0e-262 908.7 509 100.0
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 8.4e-240 833.6 506 92.7
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.8e-125 453.8 466 58.8
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 4.6e-81 306.2 438 48.2
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 5.1e-80 302.8 436 47.9
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.8e-45 188.0 464 36.6
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 3.1e-45 187.2 479 36.5
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 3.1e-45 187.2 419 37.9
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 2.0e-44 184.5 451 35.5
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.5e-42 175.6 440 34.5
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 3.0e-40 170.6 404 35.1
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 5.2e-40 169.9 441 34.9
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 5.2e-40 169.9 429 35.2
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 5.7e-39 166.4 487 32.9
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.3e-38 165.2 362 36.5
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 2.8e-38 164.1 442 34.6
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.8e-38 164.1 432 33.1
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 6.3e-38 162.9 435 34.3
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 1.4e-37 161.8 381 36.0
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 2.4e-37 161.0 430 36.0
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.2e-37 160.6 457 31.7
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 9.2e-37 159.1 371 36.9
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.2e-36 158.7 455 33.6
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.2e-36 158.7 323 39.9
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 3.5e-36 157.1 439 34.4
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.0e-35 155.6 452 33.6
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.7e-35 154.8 455 33.4
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.3e-35 154.5 412 32.8
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 3.9e-35 153.7 415 35.2
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 8.6e-35 152.5 399 35.8
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 2.5e-34 151.0 344 36.0
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 5.6e-34 149.8 400 33.5
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 2.8e-33 147.5 425 33.6
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 6.1e-33 146.4 451 32.8
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 8.0e-33 146.0 369 35.8
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.3e-32 144.4 456 32.0
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 8.9e-32 142.5 475 32.4
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 8.9e-32 142.5 380 35.5
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.4e-31 140.6 462 32.7
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 1.7e-30 138.3 403 33.7
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 3.7e-30 137.1 392 34.9
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 4.9e-30 136.7 424 31.1
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.9e-30 136.7 461 33.6
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.9e-29 134.8 420 31.7
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.4e-29 134.4 431 29.9
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.1e-29 133.7 350 36.0
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.2e-28 132.1 443 31.8
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.5e-28 130.6 548 28.8
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 6.0e-28 129.8 447 30.6
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 1.3e-27 128.6 453 31.3
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.7e-27 128.3 429 33.1
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.5e-26 125.2 475 29.7
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.5e-26 124.4 415 29.2
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 5.6e-26 123.2 431 30.6
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 8.0e-25 119.4 366 34.7
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 1.8e-24 118.2 362 31.2
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 3.1e-24 117.5 261 37.2
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.5e-23 115.2 228 39.0
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 2.6e-23 114.4 499 28.1
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 2.9e-22 110.9 400 31.0
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 6.4e-22 109.8 483 27.7
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 4.1e-21 107.1 429 29.6
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 3.5e-20 104.0 503 28.2
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.6e-20 103.6 214 40.7
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 6.0e-20 103.2 513 26.3
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.0e-20 103.2 226 38.5
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 3.0e-19 100.9 462 26.8
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 3.0e-19 100.9 462 26.8
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.9e-19 100.5 338 28.4
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 6.6e-19 99.8 409 29.6
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 6.6e-19 99.8 397 29.0
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.1e-18 99.0 456 29.4
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.9e-18 98.2 338 27.8
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 1.9e-18 98.2 338 27.8
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 7.3e-18 96.3 395 31.6
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 9.5e-18 95.9 365 26.8
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 9.5e-18 95.9 401 29.7
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.6e-17 95.1 502 27.1
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.6e-17 95.1 422 27.0
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 2.1e-17 94.7 407 27.3
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.1e-17 94.7 459 28.1
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.1e-17 94.7 332 29.5
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 4.7e-17 93.6 349 29.2
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 6.2e-17 93.2 435 27.8
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 1.4e-16 92.0 486 26.3
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.4e-16 92.0 328 29.9
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.8e-16 91.7 409 29.1
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 4.0e-16 90.5 351 29.3
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 5.2e-16 90.1 398 28.9
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 5.2e-16 90.1 298 31.9
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 6.8e-16 89.7 349 29.2
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 8.9e-16 89.4 339 27.1
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 3.4e-15 87.4 439 28.0
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 7.6e-15 86.3 223 35.0
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.3e-14 85.5 396 27.5
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 1.7e-14 85.1 406 27.3
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.2e-14 84.7 264 30.7
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 3.7e-14 84.0 345 27.2
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 3.7e-14 84.0 245 33.1
PGSC0003DMG400011188 Solanum tuberosum HOM05D003426 ORTHO05D003816 4.9e-14 83.6 149 39.6
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 6.4e-14 83.2 361 29.4
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 1.1e-13 82.4 287 32.4
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 1.1e-13 82.4 397 27.2
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 4.1e-13 80.5 339 27.1
Sopen07g001820 Solanum pennellii HOM05D003426 ORTHO05D003816 5.4e-13 80.1 114 50.0
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 7.1e-13 79.7 213 31.9
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 7.1e-13 79.7 101 44.6
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.7e-12 77.8 220 35.0
ECA234G0256 Erigeron canadensis HOM05D003426 ORTHO05D003816 2.7e-12 77.8 236 32.2
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 2.7e-12 77.8 78 53.8
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.7e-12 77.8 337 28.2
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 3.5e-12 77.4 259 29.7
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 3.5e-12 77.4 198 35.4
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 6.0e-12 76.6 193 34.2
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 6.0e-12 76.6 182 28.0
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.0e-11 75.9 195 32.8
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.0e-11 75.9 196 35.7
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.3e-11 75.5 447 25.5
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 1.3e-11 75.5 123 50.4
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 1.3e-11 75.5 412 27.7
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 1.7e-11 75.1 218 30.3
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 1.7e-11 75.1 417 27.1
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 2.3e-11 74.7 257 28.8
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 5.1e-11 73.6 184 31.5
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 5.1e-11 73.6 432 26.4
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.1e-11 73.6 418 27.0
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.1e-11 73.6 193 31.1
GSVIVG01023627001 Vitis vinifera HOM05D003426 ORTHO05D003816 5.1e-11 73.6 239 35.1
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 6.6e-11 73.2 144 38.9
Glyma.17G193101 Glycine max HOM05D003426 ORTHO05D003816 1.5e-10 72.0 193 33.2
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 1.5e-10 72.0 441 26.5
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 2.5e-10 71.2 326 25.8
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 2.5e-10 71.2 199 34.2
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 4.3e-10 70.5 261 27.2
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 7.3e-10 69.7 348 26.1
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 7.3e-10 69.7 270 28.1
QL02p093555 Quercus lobata HOM05D003426 ORTHO05D003816 7.3e-10 69.7 123 47.2
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.2e-09 68.9 236 31.4
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 2.1e-09 68.2 64 53.1
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 2.8e-09 67.8 64 54.7
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 4.7e-09 67.0 231 28.6
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.4e-08 65.5 395 25.1
Ciclev10032854m.g Citrus clementina HOM05D003426 ORTHO05D003816 1.8e-08 65.1 208 35.1
Lsat_1_v5_gn_5_89740 Lactuca sativa HOM05D003426 ORTHO05D003816 1.8e-08 65.1 209 30.1
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 6.8e-08 63.2 217 29.5
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.2e-07 62.4 229 31.0
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.2e-07 62.4 430 23.0
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 1.2e-07 62.4 214 29.0
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 1.2e-07 62.4 367 26.7
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.0e-07 61.6 382 25.1
Solyc07g005710.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.6e-07 61.2 90 47.8
CAN.G930.15 Capsicum annuum HOM05D003426 ORTHO05D003816 9.9e-07 59.3 129 38.0
Lsat_1_v5_gn_5_90221 Lactuca sativa HOM05D029854 ORTHO05D003816 1.3e-06 58.9 349 24.9
TWI14G0488 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 1.3e-06 58.9 159 27.0
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 1.7e-06 58.5 242 24.8
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 1.7e-06 58.5 209 23.0
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 2.9e-06 57.8 80 45.0
GSVIVG01016047001 Vitis vinifera HOM05D003426 ORTHO05D003816 2.9e-06 57.8 45 57.8
QL02p018764 Quercus lobata HOM05D003426 ORTHO05D003816 3.8e-06 57.4 179 29.1
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 4.9e-06 57.0 259 27.0
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.4e-06 56.6 168 27.4
Rhsim07G0165800 Rhododendron simsii HOM05D022929 ORTHO05D050680 6.4e-06 56.6 223 28.3
Thhalv10000536m.g Eutrema salsugineum HOM05D012895 ORTHO05D014428 8.4e-06 56.2 369 23.8
Gorai.005G226700 Gossypium raimondii HOM05D000650 ORTHO05D007302 8.4e-06 56.2 267 25.1
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 8.4e-06 56.2 517 24.2
Sed0023941 Sechium edule HOM05D003426 ORTHO05D003816 8.4e-06 56.2 221 29.9


User provided reference genes

Program Settings