Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025300 Chenopodium quinoa HOM05D004597 ORTHO05D005629 1.1e-83 313.2 151 100.0
AUR62028306 Chenopodium quinoa HOM05D004597 ORTHO05D005629 1.8e-81 305.8 150 98.0
EL10Ac8g18994 Beta vulgaris HOM05D004597 ORTHO05D005629 1.5e-80 302.8 150 95.3
Hund08871 Selenicereus undatus HOM05D004597 ORTHO05D005629 2.1e-77 292.4 150 91.3
Oeu028117.1 Olea europaea HOM05D004597 ORTHO05D005629 1.0e-76 290.0 148 91.9
Sc18g0002790 Simmondsia chinensis HOM05D004597 ORTHO05D005629 1.0e-76 290.0 150 90.7
SalBow6G0240 Salvia bowleyana HOM05D004597 ORTHO05D005629 3.0e-76 288.5 150 90.0
DCAR_024773 Daucus carota HOM05D004597 ORTHO05D005629 2.5e-75 285.4 150 88.7
SGA_v2.0_scaffold281G46915 Striga asiatica HOM05D004597 ORTHO05D005629 2.5e-75 285.4 150 88.7
ClCG08G002020 Citrullus lanatus HOM05D004597 ORTHO05D005629 3.3e-75 285.0 150 88.0
Thecc.09G071400 Theobroma cacao HOM05D004597 ORTHO05D005629 4.3e-75 284.6 150 88.0
Medtr4g124790 Medicago truncatula HOM05D004597 ORTHO05D005629 7.3e-75 283.9 150 88.0
Lj4g0020079 Lotus japonicus HOM05D004597 ORTHO05D005629 9.6e-75 283.5 150 88.0
Ah.09g229020 Amaranthus hybridus HOM05D004597 ORTHO05D005629 1.6e-74 282.7 150 90.7
Ciclev10009453m.g Citrus clementina HOM05D004597 ORTHO05D005629 2.1e-74 282.3 148 87.2
Sed0000155 Sechium edule HOM05D004597 ORTHO05D005629 2.1e-74 282.3 150 87.3
ATR0681G150 Amborella trichopoda HOM05D004597 ORTHO05D005629 2.8e-74 282.0 150 86.7
CiPaw.03G201900 Carya illinoinensis HOM05D004597 ORTHO05D005629 2.8e-74 282.0 150 87.3
Ca_21333_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 3.6e-74 281.6 150 87.3
Ca_30964_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 3.6e-74 281.6 150 87.3
Cc06_g12610 Coffea canephora HOM05D004597 ORTHO05D005629 3.6e-74 281.6 148 87.8
Manes.16G091900 Manihot esculenta HOM05D004597 ORTHO05D005629 3.6e-74 281.6 150 86.7
CDE11G0438 Ceratophyllum demersum HOM05D004597 ORTHO05D005629 4.7e-74 281.2 150 85.3
COL.COLO4_21219 Corchorus olitorius HOM05D004597 ORTHO05D005629 4.7e-74 281.2 150 86.7
Prupe.7G193200 Prunus persica HOM05D004597 ORTHO05D005629 4.7e-74 281.2 150 86.7
ECA234G4331 Erigeron canadensis HOM05D004597 ORTHO05D005629 8.1e-74 280.4 150 86.0
vmacro17088 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 8.1e-74 280.4 150 86.0
CsaV3_6G002530 Cucumis sativus L. HOM05D004597 ORTHO05D005629 1.1e-73 280.0 150 86.7
MD15G1222600 Malus domestica HOM05D004597 ORTHO05D005629 1.1e-73 280.0 150 86.7
CDE05G1003 Ceratophyllum demersum HOM05D004597 ORTHO05D005629 1.4e-73 279.6 150 84.7
Eucgr.C00774 Eucalyptus grandis HOM05D004597 ORTHO05D005629 1.4e-73 279.6 148 87.2
Lsat_1_v5_gn_5_139160 Lactuca sativa HOM05D004597 ORTHO05D005629 1.4e-73 279.6 150 86.7
Os06g0196300 Oryza sativa ssp. japonica HOM05D004597 ORTHO05D005629 1.4e-73 279.6 150 87.3
MSTRG.19433 Avicennia marina HOM05D004597 ORTHO05D005629 1.8e-73 279.3 148 87.2
MSTRG.26494 Avicennia marina HOM05D004597 ORTHO05D005629 1.8e-73 279.3 150 85.3
HanXRQChr12g0354281 Helianthus annuus HOM05D004597 ORTHO05D005629 1.8e-73 279.3 150 84.7
Sed0006126 Sechium edule HOM05D004597 ORTHO05D005629 1.8e-73 279.3 150 86.0
Lalb_Chr13g0299261 Lupinus albus HOM05D004597 ORTHO05D005629 2.4e-73 278.9 148 87.2
Rhsim08G0029600 Rhododendron simsii HOM05D004597 ORTHO05D005629 2.4e-73 278.9 150 85.3
CSS0005573 Camellia sinensis var. sinensis HOM05D004597 ORTHO05D005629 3.1e-73 278.5 151 86.8
RcHm_v2.0_Chr2g0095781 Rosa chinensis HOM05D004597 ORTHO05D005629 3.1e-73 278.5 150 86.7
Atru.chr7.1756 Acer truncatum HOM05D004597 ORTHO05D005629 4.0e-73 278.1 150 86.0
Cfa002950 Carpinus fangiana HOM05D004597 ORTHO05D005629 4.0e-73 278.1 150 85.3
Haze_26057 Corylus avellana HOM05D004597 ORTHO05D005629 4.0e-73 278.1 150 85.3
Nitab4.5_0001699g0010 Nicotiana tabacum HOM05D004597 ORTHO05D005629 6.9e-73 277.3 150 84.7
Psat4g018640 Pisum sativum HOM05D004597 ORTHO05D005629 6.9e-73 277.3 150 84.0
TWI32G1285 Tripterygium wilfordii HOM05D004597 ORTHO05D005629 6.9e-73 277.3 150 84.0
Lj4A919T43 Lonicera japonica HOM05D004597 ORTHO05D005629 8.9e-73 276.9 151 83.4
Nn6g35647 Nelumbo nucifera HOM05D004597 ORTHO05D005629 8.9e-73 276.9 150 84.7
Solyc07g042440.3 Solanum lycopersicum HOM05D004597 ORTHO05D005629 8.9e-73 276.9 150 84.7
Sopen07g022070 Solanum pennellii HOM05D004597 ORTHO05D005629 8.9e-73 276.9 150 84.7
PGSC0003DMG400013551 Solanum tuberosum HOM05D004597 ORTHO05D005629 8.9e-73 276.9 150 84.7
Migut.J00892 Erythranthe guttata HOM05D004597 ORTHO05D005629 1.2e-72 276.6 150 86.7
Oeu055329.1 Olea europaea HOM05D004597 ORTHO05D005629 1.2e-72 276.6 148 87.2
Potri.006G137500 Populus trichocarpa HOM05D004597 ORTHO05D005629 1.5e-72 276.2 150 84.0
VMungo1215G0896 Vigna mungo HOM05D004597 ORTHO05D005629 1.5e-72 276.2 150 85.3
Cpa.g.sc82.76 Carica papaya HOM05D004597 ORTHO05D005629 2.0e-72 275.8 150 86.7
Gohir.A08G246600 Gossypium hirsutum HOM05D004597 ORTHO05D005629 2.0e-72 275.8 150 86.0
Peaxi162Scf00191g00102 Petunia axillaris HOM05D004597 ORTHO05D005629 2.0e-72 275.8 150 84.0
arahy.Tifrunner.gnm1.ann1.4N6INR Arachis hypogaea HOM05D004597 ORTHO05D005629 2.6e-72 275.4 147 86.4
arahy.Tifrunner.gnm1.ann1.4YLW35 Arachis hypogaea HOM05D004597 ORTHO05D005629 2.6e-72 275.4 147 86.4
CAN.G210.7 Capsicum annuum HOM05D004597 ORTHO05D005629 3.4e-72 275.0 150 84.0
Dinv25516 Davidia involucrata HOM05D004597 ORTHO05D005629 4.4e-72 274.6 150 84.0
FvH4_1g09250 Fragaria vesca HOM05D004597 ORTHO05D005629 4.4e-72 274.6 150 84.0
FAN19G2435 Fragaria x ananassa HOM05D004597 ORTHO05D005629 4.4e-72 274.6 150 84.0
Sabra06G0107600 Salix brachista HOM05D004597 ORTHO05D005629 4.4e-72 274.6 150 83.3
FAN26G0325 Fragaria x ananassa HOM05D004597 ORTHO05D005629 5.8e-72 274.2 150 83.3
FAN26G3440 Fragaria x ananassa HOM05D004597 ORTHO05D005629 5.8e-72 274.2 150 83.3
Lalb_Chr13g0299251 Lupinus albus HOM05D004597 ORTHO05D005629 5.8e-72 274.2 150 85.3
Nitab4.5_0007540g0030 Nicotiana tabacum HOM05D004597 ORTHO05D005629 5.8e-72 274.2 150 84.0
PGR119G0607 Punica granatum HOM05D004597 ORTHO05D005629 5.8e-72 274.2 150 84.7
CANSAT56G1179 Cannabis sativa HOM05D004597 ORTHO05D005629 9.9e-72 273.5 150 83.3
Gohir.D08G267800 Gossypium hirsutum HOM05D004597 ORTHO05D005629 9.9e-72 273.5 150 85.3
Rhsim08G0029700 Rhododendron simsii HOM05D004597 ORTHO05D005629 9.9e-72 273.5 150 82.7
Glyma.17G046500 Glycine max HOM05D004597 ORTHO05D005629 1.3e-71 273.1 150 83.3
Aa31LG4G13040 Aethionema arabicum HOM05D004597 ORTHO05D005629 1.7e-71 272.7 148 84.5
CSS0048779 Camellia sinensis var. sinensis HOM05D004597 ORTHO05D005629 1.7e-71 272.7 150 85.3
FAN23G2914 Fragaria x ananassa HOM05D004597 ORTHO05D005629 1.7e-71 272.7 150 83.3
GSVIVG01015027001 Vitis vinifera HOM05D004597 ORTHO05D005629 1.7e-71 272.7 150 83.3
Aqoxy7G00987 Aquilegia oxysepala HOM05D004597 ORTHO05D005629 2.2e-71 272.3 150 83.3
Phvul.003G128266 Phaseolus vulgaris HOM05D004597 ORTHO05D005629 2.2e-71 272.3 150 84.0
HPP92_019114 Vanilla planifolia HOM05D004597 ORTHO05D005629 2.2e-71 272.3 151 81.5
Glyma.13G113200 Glycine max HOM05D004597 ORTHO05D005629 2.9e-71 271.9 150 84.0
QL11p002680 Quercus lobata HOM05D004597 ORTHO05D005629 2.9e-71 271.9 149 81.9
Peaxi162Scf00418g00113 Petunia axillaris HOM05D004597 ORTHO05D005629 3.8e-71 271.6 150 83.3
MD02G1099800 Malus domestica HOM05D004597 ORTHO05D005629 4.9e-71 271.2 150 84.0
arahy.Tifrunner.gnm1.ann1.SJ1504 Arachis hypogaea HOM05D004597 ORTHO05D005629 6.4e-71 270.8 150 81.3
THA.LOC104815073 Tarenaya hassleriana HOM05D004597 ORTHO05D005629 8.4e-71 270.4 148 83.8
Zm00001eb278510 Zea mays HOM05D004597 ORTHO05D005629 8.4e-71 270.4 150 84.7
arahy.Tifrunner.gnm1.ann1.2G0Z8B Arachis hypogaea HOM05D004597 ORTHO05D005629 1.1e-70 270.0 150 81.3
Potri.018G063300 Populus trichocarpa HOM05D004597 ORTHO05D005629 1.1e-70 270.0 150 82.7
PSO104G0043 Papaver somniferum HOM05D004597 ORTHO05D005629 1.4e-70 269.6 150 82.7
Thhalv10021501m.g Eutrema salsugineum HOM05D004597 ORTHO05D005629 2.4e-70 268.9 148 82.4
Nitab4.5_0000400g0030 Nicotiana tabacum HOM05D004597 ORTHO05D005629 4.2e-70 268.1 150 82.0
Nitab4.5_0001092g0070 Nicotiana tabacum HOM05D004597 ORTHO05D005629 7.1e-70 267.3 150 82.0
PSO421G0191 Papaver somniferum HOM05D004597 ORTHO05D005629 1.6e-69 266.2 150 82.7
CARHR147050 Cardamine hirsuta HOM05D004597 ORTHO05D005629 2.1e-69 265.8 148 82.4
Duzib150G0058 Durio zibethinus HOM05D004597 ORTHO05D005629 3.5e-69 265.0 148 83.1
Sabra18G0056100 Salix brachista HOM05D004597 ORTHO05D005629 7.8e-69 263.8 150 82.0
PSO421G0482 Papaver somniferum HOM05D004597 ORTHO05D005629 1.0e-68 263.5 150 80.7
MELO3C025034.2 Cucumis melo HOM05D004597 ORTHO05D005629 2.3e-68 262.3 186 69.9
SEGI_12051 Sequoiadendron giganteum HOM05D004597 ORTHO05D005629 2.3e-68 262.3 150 78.7
BcaB02g10783 Brassica carinata HOM05D004597 ORTHO05D005629 1.9e-67 259.2 148 81.1
FAN28G1763 Fragaria x ananassa HOM05D004597 ORTHO05D005629 1.9e-67 259.2 175 71.4
BolC3t19018H Brassica oleracea HOM05D004597 ORTHO05D005629 3.3e-67 258.5 148 81.1
BraA06t25436Z Brassica rapa HOM05D004597 ORTHO05D005629 3.3e-67 258.5 148 81.1
BcaC01g02171 Brassica carinata HOM05D004597 ORTHO05D005629 9.6e-67 256.9 148 80.4
A06p23440 Brassica napus HOM05D004597 ORTHO05D005629 9.6e-67 256.9 148 80.4
C03p67930 Brassica napus HOM05D004597 ORTHO05D005629 9.6e-67 256.9 148 80.4
AT3G26060 Arabidopsis thaliana HOM05D004597 ORTHO05D005629 1.3e-66 256.5 148 80.4
Carub.0005s0392 Capsella rubella HOM05D004597 ORTHO05D005629 1.3e-66 256.5 148 80.4
Sp5g18690 Schrenkiella parvula HOM05D004597 ORTHO05D005629 1.6e-66 256.1 148 79.7
AL5G14740 Arabidopsis lyrata HOM05D004597 ORTHO05D005629 3.6e-66 255.0 148 79.7
DCAR_011918 Daucus carota HOM05D004597 ORTHO05D005629 1.7e-63 246.1 157 74.5
SMO146G0055 Selaginella moellendorffii HOM05D004597 ORTHO05D005629 6.4e-63 244.2 151 72.2
Mapoly0033s0151 Marchantia polymorpha HOM05D004597 ORTHO05D005629 1.9e-62 242.7 150 71.3
Pp3c25_1840 Physcomitrium patens HOM05D004597 ORTHO05D005629 1.8e-57 226.1 148 64.9
Hund26094 Selenicereus undatus HOM05D004597 ORTHO05D005629 3.1e-57 225.3 123 85.4
Pp3c2_15400 Physcomitrium patens HOM05D004597 ORTHO05D005629 7.6e-56 220.7 148 67.6
Hma1.2p1_0169F.1_g074350 Hydrangea macrophylla HOM05D004597 ORTHO05D005629 1.1e-51 206.8 150 68.7
Lsat_1_v5_gn_3_58180 Lactuca sativa HOM05D004597 ORTHO05D005629 2.8e-50 202.2 121 76.9
SMO239G0145 Selaginella moellendorffii HOM05D004597 ORTHO05D005629 2.8e-50 202.2 149 57.7
Lsat_1_v5_gn_7_82541 Lactuca sativa HOM05D004597 ORTHO05D005629 4.0e-49 198.4 115 78.3
vmacro17087 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 2.6e-48 195.7 105 85.7
Actinidia30251 Actinidia chinensis HOM05D004597 ORTHO05D005629 6.9e-41 171.0 144 60.4
THA.LOC104815153 Tarenaya hassleriana HOM05D004597 ORTHO05D005629 2.2e-39 166.0 145 54.5
Lsat_1_v5_gn_6_72620 Lactuca sativa HOM05D004597 ORTHO05D005629 1.9e-38 162.9 100 75.0
Prupe.1G206600 Prunus persica HOM05D004597 ORTHO05D005629 2.7e-37 159.1 150 56.7
CBR_g31073 Chara braunii HOM05D004597 ORTHO05D000002 3.0e-36 155.6 99 67.7
Cre10.g422300 Chlamydomonas reinhardtii HOM05D004597 ORTHO05D005629 2.8e-34 149.1 138 47.8
PRCOL_00006100 Prasinoderma coloniale HOM05D004597 ORTHO05D005629 4.8e-34 148.3 147 49.0
Dinv42426 Davidia involucrata HOM05D004597 ORTHO05D005629 1.1e-33 147.1 77 88.3
QL11p002688 Quercus lobata HOM05D004597 ORTHO05D005629 3.4e-32 142.1 77 83.1
TPR.G12546 Trifolium pratense HOM05D004597 ORTHO05D005629 4.5e-32 141.7 81 79.0
QL11p002682 Quercus lobata HOM05D004597 ORTHO05D005629 7.7e-32 141.0 72 87.5
Gorai.004G285400 Gossypium raimondii HOM05D004597 ORTHO05D005629 6.5e-31 137.9 78 82.1
Prupe.3G139200 Prunus persica HOM05D004597 ORTHO05D005629 1.1e-30 137.1 74 86.5
Ca_28838_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 2.2e-26 122.9 149 43.6
TPR.G7463 Trifolium pratense HOM05D004597 ORTHO05D005629 8.2e-26 120.9 103 62.1
Pp3c10_380 Physcomitrium patens HOM05D004597 ORTHO05D005629 5.3e-25 118.2 85 61.2
TPR.G24405 Trifolium pratense HOM05D004597 ORTHO05D005629 1.4e-20 103.6 73 71.2
PRCOL_00007099 Prasinoderma coloniale HOM05D004597 ORTHO05D005629 3.1e-17 92.4 129 38.0
Lsat_1_v5_gn_5_125061 Lactuca sativa HOM05D004597 ORTHO05D005629 5.3e-17 91.7 57 73.7
Cre06.g257601 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 7.7e-16 87.8 155 32.3
MCO10G030 Micromonas commoda HOM05D003127 ORTHO05D003709 1.3e-15 87.0 155 33.5
PRCOL_00002734 Prasinoderma coloniale HOM05D003127 ORTHO05D003709 2.9e-15 85.9 155 34.2
Haze_27581 Corylus avellana HOM05D003127 ORTHO05D003709 3.8e-15 85.5 154 32.5
Hund03845 Selenicereus undatus HOM05D003127 ORTHO05D003709 1.1e-14 84.0 156 34.0
Duzib106G1688 Durio zibethinus HOM05D003127 ORTHO05D003709 1.5e-14 83.6 156 33.3
MCO02G383 Micromonas commoda HOM05D004597 ORTHO05D005629 1.9e-14 83.2 126 37.3
CAN.G574.32 Capsicum annuum HOM05D003127 ORTHO05D003709 2.5e-14 82.8 156 33.3
Sc20g0006650 Simmondsia chinensis HOM05D003127 ORTHO05D003709 2.5e-14 82.8 156 32.7
vmacro17086 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 3.2e-14 82.4 47 74.5
MELO3C030723.2 Cucumis melo HOM05D004597 ORTHO05D005629 1.2e-13 80.5 47 74.5
EL10Ac7g16812 Beta vulgaris HOM05D003127 ORTHO05D003709 1.6e-13 80.1 156 33.3
Cc06_g06390 Coffea canephora HOM05D003127 ORTHO05D003709 2.7e-13 79.3 156 32.7
Hund19871 Selenicereus undatus HOM05D003127 ORTHO05D003709 2.7e-13 79.3 156 32.7
CBR_g34275 Chara braunii HOM05D003127 ORTHO05D003709 6.7e-12 74.7 157 31.2
Cre02.g114600 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 2.0e-11 73.2 156 28.2
Prupe.7G193400 Prunus persica HOM05D004597 ORTHO05D005629 2.0e-11 73.2 73 56.2
unitig_22.g6577 Utricularia gibba HOM05D004597 ORTHO05D005629 2.0e-11 73.2 42 73.8
Cfa022044 Carpinus fangiana HOM05D004597 ORTHO05D005629 3.3e-11 72.4 72 43.1
AagrBONN_evm.TU.Sc2ySwM_344.1889 Anthoceros agrestis HOM05D004597 ORTHO05D005629 5.7e-11 71.6 49 57.1
Cre17.g743897 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 2.8e-10 69.3 159 27.7
Haze_27547 Corylus avellana HOM05D003127 ORTHO05D003709 1.8e-09 66.6 154 26.6
Oeu055331.1 Olea europaea HOM05D004597 ORTHO05D005629 4.1e-09 65.5 37 75.7
COL.COLO4_22132 Corchorus olitorius HOM05D004597 ORTHO05D005629 4.5e-08 62.0 39 74.4
THA.LOC104810985 Tarenaya hassleriana HOM05D004597 ORTHO05D406773 4.5e-08 62.0 152 30.3
AUR62029991 Chenopodium quinoa HOM05D005985 ORTHO05D007403 1.7e-07 60.1 160 23.1
AUR62002570 Chenopodium quinoa HOM05D005985 ORTHO05D007403 2.2e-07 59.7 160 22.5
Aqoxy2G02563 Aquilegia oxysepala HOM05D005985 ORTHO05D007403 5.0e-07 58.5 158 25.3
COL.COLO4_36227 Corchorus olitorius HOM05D004597 ORTHO05D005629 6.5e-07 58.2 31 83.9
Lsat_1_v5_gn_5_40881 Lactuca sativa HOM05D004597 ORTHO05D005629 6.5e-07 58.2 36 75.0
Lj6A699T60 Lonicera japonica HOM05D005985 ORTHO05D007403 4.2e-06 55.5 158 21.5
SalBow8G2871 Salvia bowleyana HOM05D005985 ORTHO05D007403 5.5e-06 55.1 130 24.6
Zm00001eb328770 Zea mays HOM05D005985 ORTHO05D007403 5.5e-06 55.1 138 26.1


User provided reference genes

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