Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.9e-120 434.9 228 100.0
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 4.2e-114 414.8 228 96.9
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 2.5e-87 325.9 230 77.8
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.4e-56 223.8 224 59.4
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.2e-41 174.1 223 50.2
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 8.0e-41 171.4 225 48.9
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 1.8e-40 170.2 223 47.1
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 2.3e-40 169.9 228 48.7
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 2.8e-38 162.9 223 45.7
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 2.8e-38 162.9 223 46.6
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 5.4e-37 158.7 224 46.9
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.0e-35 154.5 234 44.0
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.3e-35 153.3 227 45.8
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.3e-35 153.3 242 45.0
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 6.6e-35 151.8 223 45.3
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.9e-34 150.2 216 45.8
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 3.3e-34 149.4 216 45.8
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 9.5e-34 147.9 212 44.8
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.2e-33 147.5 225 45.3
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.6e-33 147.1 225 44.9
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 2.8e-33 146.4 216 44.9
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 3.6e-33 146.0 234 41.9
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 4.7e-33 145.6 214 45.8
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 8.0e-33 144.8 223 43.9
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.0e-32 144.4 235 41.7
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 1.4e-32 144.1 227 43.2
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 1.8e-32 143.7 220 44.1
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 4.0e-32 142.5 205 46.3
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.2e-32 142.1 224 42.4
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 6.8e-32 141.7 213 44.6
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 8.9e-32 141.4 239 41.4
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 8.9e-32 141.4 224 42.4
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 8.9e-32 141.4 224 42.4
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.0e-31 140.2 216 44.4
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 3.4e-31 139.4 228 43.9
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 4.4e-31 139.0 210 44.8
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 5.7e-31 138.7 205 45.9
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 5.7e-31 138.7 228 43.9
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.5e-31 138.3 224 43.8
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 2.2e-30 136.7 194 44.3
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.9e-30 136.3 240 41.7
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 4.9e-30 135.6 199 43.7
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.8e-29 133.7 213 45.1
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.1e-29 132.5 224 42.9
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 7.0e-29 131.7 228 40.8
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.6e-28 130.6 226 39.8
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 2.0e-28 130.2 230 40.4
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.7e-28 129.8 223 40.8
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 2.7e-28 129.8 207 42.0
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 3.5e-28 129.4 273 37.0
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 3.5e-28 129.4 225 39.6
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 4.6e-28 129.0 207 39.6
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 5.9e-28 128.6 227 37.9
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 5.0e-27 125.6 241 38.6
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 5.0e-27 125.6 238 39.9
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 8.6e-27 124.8 166 44.6
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 2.5e-26 123.2 238 40.8
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 9.5e-26 121.3 204 44.6
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 1.2e-25 120.9 204 45.1
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 6.1e-25 118.6 179 43.6
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.0e-24 117.9 204 42.2
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.0e-24 117.9 224 41.5
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.0e-24 117.9 217 38.2
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 4.0e-24 115.9 238 38.2
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 4.0e-24 115.9 194 38.1
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 4.0e-24 115.9 235 37.4
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 5.2e-24 115.5 220 37.3
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 5.2e-24 115.5 217 37.8
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 8.9e-24 114.8 215 38.1
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 3.4e-23 112.8 224 35.3
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 5.8e-23 112.1 209 38.8
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.7e-22 110.5 217 36.4
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.9e-22 109.8 200 41.0
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 3.7e-22 109.4 211 37.4
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 6.4e-22 108.6 227 35.2
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.1e-21 107.8 176 42.0
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 3.2e-21 106.3 212 34.4
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.2e-21 106.3 220 39.1
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 7.0e-21 105.1 225 38.7
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 7.0e-21 105.1 198 37.9
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 1.6e-20 104.0 202 37.6
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.5e-20 102.8 266 34.6
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 4.6e-20 102.4 220 35.9
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 6.0e-20 102.1 220 39.1
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 7.8e-20 101.7 221 39.4
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 7.8e-20 101.7 219 36.5
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 1.7e-19 100.5 224 37.9
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 3.0e-19 99.8 213 35.2
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 3.9e-19 99.4 161 48.4
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 5.0e-19 99.0 199 34.2
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.1e-18 97.8 197 36.5
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 1.1e-18 97.8 221 38.5
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 1.5e-18 97.4 193 36.8
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 1.5e-18 97.4 220 38.6
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 3.3e-18 96.3 217 38.2
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 4.3e-18 95.9 197 36.5
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 9.5e-18 94.7 249 35.7
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 9.5e-18 94.7 214 34.1
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 1.2e-17 94.4 197 36.0
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 1.6e-17 94.0 194 36.6
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.6e-17 94.0 220 35.9
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.1e-17 93.6 226 32.7
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 2.1e-17 93.6 218 33.0
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 2.8e-17 93.2 218 34.9
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.8e-16 90.5 210 36.7
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 8.9e-16 88.2 219 33.8
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 4.4e-15 85.9 147 36.7
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 9.8e-15 84.7 91 46.2
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.3e-14 84.3 228 34.2
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 8.3e-14 81.6 182 33.5
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.4e-13 80.9 156 35.9
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 2.4e-13 80.1 230 32.2
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 1.3e-11 74.3 207 29.5
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 3.0e-11 73.2 78 43.6
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 8.6e-11 71.6 184 32.6
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.9e-10 70.5 179 34.1
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 9.5e-10 68.2 217 30.0
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 3.6e-09 66.2 170 30.6
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.1e-08 63.2 163 35.0
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 4.0e-08 62.8 63 46.0
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.4e-07 59.7 163 34.4


User provided reference genes

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