Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024812 Chenopodium quinoa HOM05D001899 ORTHO05D001858 5.1e-250 867.5 496 100.0
Ah.11g046600 Amaranthus hybridus HOM05D001899 ORTHO05D001858 2.6e-28 131.0 331 42.0
Ah.11g046650 Amaranthus hybridus HOM05D001899 ORTHO05D001858 7.6e-28 129.4 260 47.3
EL10Ac2g02513 Beta vulgaris HOM05D001899 ORTHO05D001858 9.6e-23 112.5 287 41.8
AUR62024816 Chenopodium quinoa HOM05D001899 ORTHO05D001858 1.3e-22 112.1 245 47.8
AUR62015402 Chenopodium quinoa HOM05D001899 ORTHO05D001858 3.1e-21 107.5 228 48.7
AUR62002290 Chenopodium quinoa HOM05D001899 ORTHO05D001858 6.4e-19 99.8 248 46.8
Ah.12g063270 Amaranthus hybridus HOM05D001899 ORTHO05D001858 4.2e-18 97.1 258 43.8
AUR62035041 Chenopodium quinoa HOM05D001899 ORTHO05D001858 2.7e-17 94.4 291 41.9
EL10Ac2g02507 Beta vulgaris HOM05D000009 ORTHO05D001858 3.5e-17 94.0 291 41.2
Ah.06g181830 Amaranthus hybridus HOM05D001899 ORTHO05D001858 5.1e-16 90.1 251 39.8
MD12G1056400 Malus domestica HOM05D001899 ORTHO05D001858 5.6e-15 86.7 305 37.7
AUR62016094 Chenopodium quinoa HOM05D001899 ORTHO05D001858 1.4e-13 82.0 544 29.2
Prupe.7G078100 Prunus persica HOM05D001899 ORTHO05D001858 1.5e-12 78.6 230 41.3
SGA_v2.0_scaffold7G03908 Striga asiatica HOM05D001899 ORTHO05D001858 7.6e-12 76.3 344 35.8
PGR044G0884 Punica granatum HOM05D001899 ORTHO05D001858 9.9e-12 75.9 181 47.5
Ah.12g060960 Amaranthus hybridus HOM05D001899 ORTHO05D001858 2.2e-11 74.7 539 24.7
QL12p010054 Quercus lobata HOM05D001899 ORTHO05D001858 1.9e-10 71.6 202 41.6
FAN14G0941 Fragaria x ananassa HOM05D001899 ORTHO05D001858 2.4e-10 71.2 201 43.8
PGR044G0401 Punica granatum HOM05D001899 ORTHO05D001858 2.4e-10 71.2 154 48.1
Cfa000318 Carpinus fangiana HOM05D001899 ORTHO05D001858 3.2e-10 70.9 199 42.7
Lsat_1_v5_gn_1_124180 Lactuca sativa HOM05D001899 ORTHO05D001858 4.2e-10 70.5 175 45.7
CSS0020860 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 7.1e-10 69.7 216 43.1
FvH4_6g22160 Fragaria vesca HOM05D001899 ORTHO05D001858 7.1e-10 69.7 201 43.3
FAN09G1114 Fragaria x ananassa HOM05D001899 ORTHO05D001858 7.1e-10 69.7 201 43.3
QL03p006371 Quercus lobata HOM05D001899 ORTHO05D001858 7.1e-10 69.7 274 37.6
AL8G13160 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 1.2e-09 68.9 238 37.4
QL12p010174 Quercus lobata HOM05D001899 ORTHO05D001858 1.2e-09 68.9 205 30.7
AL8G13180 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 2.7e-09 67.8 193 42.5
FAN05G3856 Fragaria x ananassa HOM05D001899 ORTHO05D001858 2.7e-09 67.8 201 43.3
FAN02G1023 Fragaria x ananassa HOM05D001899 ORTHO05D001858 3.5e-09 67.4 201 41.8
Prupe.7G078600 Prunus persica HOM05D001899 ORTHO05D001858 4.6e-09 67.0 204 43.6
AT5G45520 Arabidopsis thaliana HOM05D001899 ORTHO05D001858 6.0e-09 66.6 193 42.5
CSS0003631 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 6.0e-09 66.6 275 37.1
CSS0023008 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 6.0e-09 66.6 206 29.1
TWI38G0922 Tripterygium wilfordii HOM05D001899 ORTHO05D001858 6.0e-09 66.6 229 41.5
AT5G45500 Arabidopsis thaliana HOM05D001899 ORTHO05D001858 1.8e-08 65.1 241 38.2
Carub.0008s0250 Capsella rubella HOM05D001899 ORTHO05D001858 1.8e-08 65.1 177 46.3
Eucgr.L03043 Eucalyptus grandis HOM05D001899 ORTHO05D001858 2.3e-08 64.7 138 54.3
Lj6g0003184 Lotus japonicus HOM05D001899 ORTHO05D001858 2.3e-08 64.7 239 31.4
BcaC03g16770 Brassica carinata HOM05D001899 ORTHO05D001858 3.0e-08 64.3 301 34.2
Actinidia11818 Actinidia chinensis HOM05D001899 ORTHO05D001858 5.1e-08 63.5 192 43.2
Eucgr.D02106 Eucalyptus grandis HOM05D001899 ORTHO05D001858 5.1e-08 63.5 222 41.9
QL03p005716 Quercus lobata HOM05D001899 ORTHO05D001858 5.1e-08 63.5 234 40.2
RcHm_v2.0_Chr3g0479511 Rosa chinensis HOM05D001899 ORTHO05D001858 8.7e-08 62.8 202 43.6
QL03p005412 Quercus lobata HOM05D001899 ORTHO05D001858 1.1e-07 62.4 243 41.6
QL05p080559 Quercus lobata HOM05D001899 ORTHO05D001858 1.1e-07 62.4 201 40.8
PGR044G0582 Punica granatum HOM05D001899 ORTHO05D001858 1.5e-07 62.0 181 42.0
BcaC06g34430 Brassica carinata HOM05D001899 ORTHO05D001858 1.9e-07 61.6 239 41.0
C07p28570 Brassica napus HOM05D001899 ORTHO05D001858 1.9e-07 61.6 239 41.0
BolC7t43395H Brassica oleracea HOM05D001899 ORTHO05D001858 1.9e-07 61.6 239 41.0
BraA06t27532Z Brassica rapa HOM05D001899 ORTHO05D001858 1.9e-07 61.6 236 39.4
Carub.0008s0252 Capsella rubella HOM05D001899 ORTHO05D001858 1.9e-07 61.6 251 38.2
CiPaw.11G083300 Carya illinoinensis HOM05D001899 ORTHO05D001858 1.9e-07 61.6 297 34.7
Thhalv10024687m.g Eutrema salsugineum HOM05D001899 ORTHO05D001858 1.9e-07 61.6 203 41.9
Hma1.2p1_0005F.1_g004450 Hydrangea macrophylla HOM05D001899 ORTHO05D001858 2.5e-07 61.2 234 39.3
MBI15_g06360_MAGBIO Magnolia biondii HOM05D001899 ORTHO05D001858 2.5e-07 61.2 212 37.7
PGR031G3911 Punica granatum HOM05D001899 ORTHO05D001858 2.5e-07 61.2 195 45.6
Actinidia25743 Actinidia chinensis HOM05D001899 ORTHO05D001858 5.6e-07 60.1 189 45.0
Aqoxy1G02156 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 5.6e-07 60.1 231 38.5
A02p29250 Brassica napus HOM05D001899 ORTHO05D001858 5.6e-07 60.1 301 33.6
CARHR176520 Cardamine hirsuta HOM05D001899 ORTHO05D001858 5.6e-07 60.1 245 38.0
Haze_06607 Corylus avellana HOM05D001899 ORTHO05D001858 5.6e-07 60.1 199 41.2
Haze_06609 Corylus avellana HOM05D000432 ORTHO05D000320 5.6e-07 60.1 153 49.7
BcaNung04015 Brassica carinata HOM05D001899 ORTHO05D001858 7.4e-07 59.7 271 36.9
DCAR_009113 Daucus carota HOM05D001899 ORTHO05D001858 7.4e-07 59.7 266 37.2
HanXRQChr11g0340171 Helianthus annuus HOM05D001899 ORTHO05D001858 7.4e-07 59.7 203 38.4
Aqoxy4G00976 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 9.6e-07 59.3 222 29.3
BcaC06g31547 Brassica carinata HOM05D001899 ORTHO05D001858 9.6e-07 59.3 235 40.0
CSS0047886 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 9.6e-07 59.3 167 46.7
DCAR_021587 Daucus carota HOM05D001899 ORTHO05D001858 9.6e-07 59.3 210 36.2
Aqoxy1G04207 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 1.3e-06 58.9 232 38.4
BraA02t07954Z Brassica rapa HOM05D001899 ORTHO05D001858 1.3e-06 58.9 301 33.6
COL.COLO4_16910 Corchorus olitorius HOM05D001899 ORTHO05D001858 1.3e-06 58.9 197 27.4
Lj1P1215T40 Lonicera japonica HOM05D001899 ORTHO05D001858 1.3e-06 58.9 222 40.5
CSS0033155 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.6e-06 58.5 148 48.6
Haze_06610 Corylus avellana HOM05D001899 ORTHO05D001858 1.6e-06 58.5 181 45.3
Eucgr.D02107 Eucalyptus grandis HOM05D001899 ORTHO05D001858 1.6e-06 58.5 172 44.8
Sp2g10420 Schrenkiella parvula HOM05D001899 ORTHO05D001858 1.6e-06 58.5 208 40.9
THA.LOC104810918 Tarenaya hassleriana HOM05D001899 ORTHO05D001858 1.6e-06 58.5 158 44.9
BcaB07g30441 Brassica carinata HOM05D001899 ORTHO05D001858 2.1e-06 58.2 250 36.8
ECA248G0422 Erigeron canadensis HOM05D001899 ORTHO05D001858 2.1e-06 58.2 193 40.4
Thhalv10000788m.g Eutrema salsugineum HOM05D001899 ORTHO05D001858 2.1e-06 58.2 180 43.9
AL7G35010 Arabidopsis lyrata HOM05D001899 ORTHO05D001858 2.8e-06 57.8 168 41.7
BcaC06g34428 Brassica carinata HOM05D001899 ORTHO05D001858 2.8e-06 57.8 227 35.2
C07p28610 Brassica napus HOM05D001899 ORTHO05D001858 2.8e-06 57.8 227 35.2
BolC7t43399H Brassica oleracea HOM05D001899 ORTHO05D001858 2.8e-06 57.8 227 35.2
CSS0019781 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 3.7e-06 57.4 214 42.5
CSS0043072 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 3.7e-06 57.4 214 42.5
QL10p057742 Quercus lobata HOM05D001899 ORTHO05D001858 3.7e-06 57.4 225 40.4
Actinidia27155 Actinidia chinensis HOM05D001899 ORTHO05D001858 4.8e-06 57.0 187 46.0
QL12p010259 Quercus lobata HOM05D001899 ORTHO05D001858 4.8e-06 57.0 155 45.8
Aqoxy4G00975 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 6.2e-06 56.6 301 27.2
Cfa000324 Carpinus fangiana HOM05D001899 ORTHO05D001858 6.2e-06 56.6 226 36.7
Cc00_g11790 Coffea canephora HOM05D001899 ORTHO05D001858 8.2e-06 56.2 219 39.7
Phvul.006G039000 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 8.2e-06 56.2 201 41.3


User provided reference genes

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