Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 3.8e-58 228.0 120 100.0
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 3.8e-58 228.0 120 100.0
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.5e-51 206.1 115 93.9
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 4.5e-51 204.5 115 93.0
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 1.0e-50 203.4 115 93.0
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.3e-50 203.0 115 93.0
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.7e-50 202.6 115 90.4
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.9e-50 201.8 115 89.6
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 3.8e-50 201.4 115 92.2
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 5.0e-50 201.1 115 89.6
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 5.0e-50 201.1 115 89.6
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 5.0e-50 201.1 114 90.4
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 8.5e-50 200.3 115 90.4
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 8.5e-50 200.3 115 89.6
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 8.5e-50 200.3 115 90.4
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 91.3
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 88.7
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 88.7
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 91.3
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 90.4
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 90.4
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.1e-49 199.9 115 90.4
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.4e-49 199.5 115 91.3
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.4e-49 199.5 114 90.4
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.4e-49 199.5 115 89.6
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.4e-49 199.5 115 90.4
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.9e-49 199.1 115 91.3
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 1.9e-49 199.1 118 89.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.9e-49 199.1 115 90.4
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.5e-49 198.7 115 87.8
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 3.2e-49 198.4 115 87.8
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 3.2e-49 198.4 114 88.6
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 3.2e-49 198.4 115 89.6
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 4.2e-49 198.0 115 90.4
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 5.5e-49 197.6 115 89.6
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 5.5e-49 197.6 115 88.7
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 5.5e-49 197.6 114 90.4
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 5.5e-49 197.6 109 94.5
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 7.2e-49 197.2 113 90.3
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 7.2e-49 197.2 115 89.6
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 7.2e-49 197.2 115 88.7
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 9.4e-49 196.8 114 89.5
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 9.4e-49 196.8 115 88.7
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.2e-48 196.4 115 88.7
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.6e-48 196.1 115 87.0
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 1.6e-48 196.1 112 91.1
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.6e-48 196.1 119 86.6
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 2.1e-48 195.7 113 88.5
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 2.1e-48 195.7 113 88.5
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 2.1e-48 195.7 115 89.6
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.7e-48 195.3 115 86.1
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 2.7e-48 195.3 114 86.0
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 2.7e-48 195.3 114 86.0
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 2.7e-48 195.3 114 86.0
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 2.7e-48 195.3 114 86.0
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.7e-48 195.3 115 86.1
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.7e-48 195.3 115 86.1
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.7e-48 195.3 115 86.1
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 3.6e-48 194.9 114 89.5
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.6e-48 194.9 114 89.5
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.6e-48 194.9 114 89.5
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 3.6e-48 194.9 115 87.0
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.6e-48 194.9 115 87.8
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 3.6e-48 194.9 115 85.2
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 4.6e-48 194.5 115 87.0
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.6e-48 194.5 114 86.8
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 4.6e-48 194.5 115 87.8
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 6.1e-48 194.1 114 85.1
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.1e-48 194.1 111 90.1
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.1e-48 194.1 111 90.1
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 6.1e-48 194.1 115 87.8
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 6.1e-48 194.1 111 90.1
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 7.9e-48 193.7 113 87.6
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 7.9e-48 193.7 114 87.7
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 7.9e-48 193.7 115 84.3
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.4e-47 193.0 115 87.0
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.4e-47 193.0 117 88.9
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 1.4e-47 193.0 115 86.1
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 1.4e-47 193.0 111 89.2
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.4e-47 193.0 111 89.2
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.4e-47 193.0 114 86.0
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 1.8e-47 192.6 112 89.3
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.8e-47 192.6 114 86.8
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.8e-47 192.6 114 86.0
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.3e-47 192.2 115 87.0
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.3e-47 192.2 115 84.3
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.3e-47 192.2 115 87.0
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 2.3e-47 192.2 115 84.3
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 3.9e-47 191.4 114 86.8
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.1e-47 191.0 114 86.8
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.1e-47 191.0 114 86.8
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 5.1e-47 191.0 114 86.8
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 5.1e-47 191.0 114 85.1
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.1e-47 191.0 115 87.0
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 6.7e-47 190.7 115 86.1
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 6.7e-47 190.7 114 86.8
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 6.7e-47 190.7 114 85.1
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 6.7e-47 190.7 111 88.3
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 6.7e-47 190.7 115 87.8
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 8.8e-47 190.3 115 86.1
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.1e-46 189.9 115 87.8
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.5e-46 189.5 114 84.2
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.0e-46 189.1 115 85.2
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 2.0e-46 189.1 114 84.2
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.0e-46 189.1 115 86.1
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 2.5e-46 188.7 115 85.2
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 3.3e-46 188.3 110 88.2
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 4.3e-46 188.0 109 89.9
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 4.3e-46 188.0 113 85.8
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.3e-46 188.0 114 84.2
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 4.3e-46 188.0 114 84.2
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 4.3e-46 188.0 114 84.2
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.3e-46 188.0 114 82.5
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 5.7e-46 187.6 114 84.2
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 5.7e-46 187.6 115 84.3
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 7.4e-46 187.2 115 86.1
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.8e-45 185.3 109 85.3
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.8e-45 185.3 115 82.6
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.7e-45 184.9 115 82.6
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 4.8e-45 184.5 107 87.9
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 4.8e-45 184.5 112 84.8
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 4.8e-45 184.5 115 83.5
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 8.2e-45 183.7 115 83.5
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.1e-44 183.3 115 83.5
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 2.4e-44 182.2 123 82.9
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 2.4e-44 182.2 115 81.7
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 6.9e-44 180.6 114 83.3
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 1.2e-43 179.9 109 84.4
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.5e-43 179.5 115 80.0
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.7e-42 176.0 115 80.9
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.9e-42 175.3 109 79.8
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 6.5e-42 174.1 114 82.5
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.9e-41 172.6 111 82.0
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.6e-40 169.5 112 75.0
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.1e-40 167.5 112 74.1
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.0e-39 166.8 107 81.3
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 5.1e-39 164.5 151 62.3
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.7e-39 164.1 110 74.5
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.5e-38 162.9 110 74.5
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 3.3e-38 161.8 105 78.1
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 3.1e-36 155.2 111 70.3
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 7.0e-36 154.1 115 73.0
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 9.1e-36 153.7 111 71.2
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 3.5e-35 151.8 89 88.8
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 7.7e-35 150.6 109 76.1
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.1e-33 146.7 114 71.9
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.4e-33 146.4 114 70.2
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.4e-33 146.4 114 70.2
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 5.5e-33 144.4 89 82.0
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 6.1e-32 141.0 82 91.5
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 1.1e-30 136.7 109 63.3
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 3.3e-30 135.2 115 68.7
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 6.3e-29 131.0 71 97.2
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 1.8e-28 129.4 115 64.3
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 4.5e-27 124.8 267 36.0
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 4.7e-24 114.8 104 56.7
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 3.0e-23 112.1 92 67.4
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 2.0e-22 109.4 99 63.6
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 3.3e-22 108.6 86 68.6
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 9.7e-22 107.1 87 67.8
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 6.3e-21 104.4 87 66.7
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 6.3e-21 104.4 87 66.7
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.1e-20 102.1 78 75.6
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.8e-15 86.3 48 91.7
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.5e-14 83.2 46 91.3
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 2.6e-14 82.4 74 60.8
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 5.7e-14 81.3 47 83.0
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.7e-13 79.7 49 79.6
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 3.1e-12 75.5 44 88.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 3.6e-08 62.0 38 78.9


User provided reference genes

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