Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024762 Chenopodium quinoa HOM05D000031 ORTHO05D001033 1.4e-54 216.1 110 100.0
AUR62024764 Chenopodium quinoa HOM05D000031 ORTHO05D001033 7.3e-40 167.2 106 81.1
AUR62037689 Chenopodium quinoa HOM05D000031 ORTHO05D001033 2.7e-26 122.1 124 61.3
AUR62024760 Chenopodium quinoa HOM05D004721 ORTHO05D005765 4.6e-26 121.3 124 61.3
EL10Ac2g02440 Beta vulgaris HOM05D000031 ORTHO05D001033 1.1e-16 90.1 100 49.0
AUR62024761 Chenopodium quinoa HOM05D000031 ORTHO05D001033 9.3e-11 70.5 105 46.7
AUR62037690 Chenopodium quinoa HOM05D000031 ORTHO05D001033 2.3e-09 65.9 108 38.9
Ah.03g134120 Amaranthus hybridus HOM05D000031 ORTHO05D001033 2.5e-08 62.4 108 39.8
EL10Ac9g21018 Beta vulgaris HOM05D000031 ORTHO05D001033 4.3e-08 61.6 114 38.6
Ah.08g223120 Amaranthus hybridus HOM05D000031 ORTHO05D001033 4.8e-07 58.2 101 43.6
AUR62041332 Chenopodium quinoa HOM05D000031 ORTHO05D001033 4.8e-07 58.2 114 36.8
DCAR_014170 Daucus carota HOM05D000033 ORTHO05D001583 4.8e-07 58.2 104 37.5
Oeu031145.1 Olea europaea HOM05D000033 ORTHO05D001583 6.2e-07 57.8 111 35.1
HanXRQChr05g0142651 Helianthus annuus HOM05D000033 ORTHO05D001583 8.1e-07 57.4 105 37.1
Cfa019625 Carpinus fangiana HOM05D000033 ORTHO05D001583 1.1e-06 57.0 105 36.2
AUR62024009 Chenopodium quinoa HOM05D000031 ORTHO05D001033 1.1e-06 57.0 113 35.4
Haze_18898 Corylus avellana HOM05D000033 ORTHO05D001583 1.1e-06 57.0 105 36.2
vmacro07706 Vaccinium macrocarpon HOM05D000033 ORTHO05D001583 1.1e-06 57.0 105 36.2
AUR62018972 Chenopodium quinoa HOM05D000031 ORTHO05D001033 1.4e-06 56.6 107 36.4
arahy.Tifrunner.gnm1.ann1.HD065W Arachis hypogaea HOM05D000033 ORTHO05D001583 1.8e-06 56.2 107 33.6
EL10Ac9g21020 Beta vulgaris HOM05D000031 ORTHO05D001033 1.8e-06 56.2 112 35.7
ECA233G5322 Erigeron canadensis HOM05D000033 ORTHO05D001583 1.8e-06 56.2 105 37.1
ECA246G2696 Erigeron canadensis HOM05D000033 ORTHO05D001583 1.8e-06 56.2 108 36.1
Ah.05g171550 Amaranthus hybridus HOM05D000033 ORTHO05D001583 2.4e-06 55.8 110 35.5
EL10Ac2g04772 Beta vulgaris HOM05D000166 ORTHO05D000812 2.4e-06 55.8 95 37.9
arahy.Tifrunner.gnm1.ann1.VNZ83X Arachis hypogaea HOM05D000033 ORTHO05D001583 3.1e-06 55.5 106 34.0
MSTRG.13556 Avicennia marina HOM05D000033 ORTHO05D001688 3.1e-06 55.5 102 35.3
EL10Ac2g02438 Beta vulgaris HOM05D000031 ORTHO05D001033 3.1e-06 55.5 110 35.5
Cc07_g13350 Coffea canephora HOM05D000033 ORTHO05D001583 3.1e-06 55.5 105 35.2
Gohir.A03G092200 Gossypium hirsutum HOM05D000033 ORTHO05D001583 3.1e-06 55.5 105 36.2
Gohir.D02G121000 Gossypium hirsutum HOM05D000033 ORTHO05D001583 3.1e-06 55.5 105 36.2
Gorai.005G133200 Gossypium raimondii HOM05D000033 ORTHO05D001583 3.1e-06 55.5 105 36.2
MBI19_g14523_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D001583 3.1e-06 55.5 108 35.2
CiPaw.16G096800 Carya illinoinensis HOM05D000033 ORTHO05D001583 4.0e-06 55.1 105 36.2
CiPaw.03G072800 Carya illinoinensis HOM05D000033 ORTHO05D001583 5.3e-06 54.7 106 35.8
Lj5C160T13 Lonicera japonica HOM05D000033 ORTHO05D001583 5.3e-06 54.7 105 35.2
Lalb_Chr05g0221551 Lupinus albus HOM05D000033 ORTHO05D001583 5.3e-06 54.7 105 36.2
PSO017G4796 Papaver somniferum HOM05D000033 ORTHO05D001583 5.3e-06 54.7 101 36.6
PSO478G1491 Papaver somniferum HOM05D000033 ORTHO05D001583 5.3e-06 54.7 101 36.6
Sc10g0002130 Simmondsia chinensis HOM05D000166 ORTHO05D000812 5.3e-06 54.7 105 33.3
Sc13g0009510 Simmondsia chinensis HOM05D000033 ORTHO05D001999 5.3e-06 54.7 96 36.5
Actinidia09073 Actinidia chinensis HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
Cpa.g.sc3.371 Carica papaya HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
CsaV3_1G004950 Cucumis sativus L. HOM05D000033 ORTHO05D001583 6.9e-06 54.3 103 35.9
Dinv06371 Davidia involucrata HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
Eucgr.H00539 Eucalyptus grandis HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 34.3
Lj2g0002405 Lotus japonicus HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
Nitab4.5_0000201g0100 Nicotiana tabacum HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 35.2
Peaxi162Scf00314g00426 Petunia axillaris HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
Phvul.002G331400 Phaseolus vulgaris HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
PGR044G2209 Punica granatum HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
Sc08g0002930 Simmondsia chinensis HOM05D000033 ORTHO05D001583 6.9e-06 54.3 108 34.3
Thecc.03G059900 Theobroma cacao HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
VMungo0251G1163 Vigna mungo HOM05D000033 ORTHO05D001583 6.9e-06 54.3 105 36.2
Zm00001eb399900 Zea mays HOM05D000033 ORTHO05D001583 6.9e-06 54.3 103 38.8
MSTRG.2622 Avicennia marina HOM05D000033 ORTHO05D001583 9.0e-06 53.9 110 33.6
Dinv19282 Davidia involucrata HOM05D000033 ORTHO05D001583 9.0e-06 53.9 105 35.2
Duzib205G1822 Durio zibethinus HOM05D000033 ORTHO05D001583 9.0e-06 53.9 105 35.2
Nitab4.5_0005102g0090 Nicotiana tabacum HOM05D000033 ORTHO05D001583 9.0e-06 53.9 105 35.2
Rhsim09G0186600 Rhododendron simsii HOM05D000033 ORTHO05D000913 9.0e-06 53.9 110 37.3
PGSC0003DMG402014186 Solanum tuberosum HOM05D000033 ORTHO05D001583 9.0e-06 53.9 105 36.2


User provided reference genes

Program Settings