Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 0.0e+00 1694.1 857 100.0
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 0.0e+00 1489.9 872 88.6
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 0.0e+00 1266.9 946 71.6
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 0.0e+00 1249.2 907 71.8
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.7e-306 1055.8 892 64.1
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 2.9e-301 1038.5 909 60.0
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 1.0e-298 1030.0 899 60.8
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 7.3e-297 1023.8 895 59.7
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 1.6e-296 1022.7 901 60.4
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 2.8e-296 1021.9 908 59.8
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 2.0e-294 1015.8 933 58.0
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 4.9e-293 1011.1 898 59.4
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 1.9e-292 1009.2 892 59.0
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 9.3e-292 1006.9 903 60.0
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 1.6e-291 1006.1 901 59.3
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 8.7e-290 1000.3 901 58.8
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 8.7e-290 1000.3 891 61.6
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 1.1e-289 1000.0 903 59.2
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.5e-289 998.8 903 59.1
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 8.1e-288 993.8 895 59.1
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 1.8e-287 992.6 903 58.3
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 9.0e-287 990.3 903 59.6
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 1.7e-285 986.1 968 54.8
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 2.2e-285 985.7 866 59.6
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 2.2e-285 985.7 899 58.0
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 3.8e-285 984.9 894 59.5
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 4.2e-284 981.5 907 58.4
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 4.2e-284 981.5 907 59.9
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 5.5e-284 981.1 915 58.3
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 1.3e-282 976.5 891 59.6
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 1.1e-281 973.4 905 59.0
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 1.9e-281 972.6 918 56.9
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 1.9e-281 972.6 895 57.5
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 4.3e-281 971.5 905 58.1
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 1.3e-280 969.9 906 57.4
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 1.3e-280 969.9 937 56.1
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 1.6e-280 969.5 905 58.1
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 2.8e-280 968.8 907 57.9
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 3.7e-280 968.4 905 57.6
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 3.1e-279 965.3 906 60.6
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 1.5e-278 963.0 906 57.0
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 1.0e-277 960.3 929 56.0
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 2.9e-277 958.7 902 56.3
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 3.8e-277 958.4 897 59.2
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 4.9e-277 958.0 897 58.2
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 1.4e-276 956.4 900 57.2
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 1.4e-276 956.4 911 56.4
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 3.2e-276 955.3 933 56.7
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 3.5e-275 951.8 900 57.3
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 1.0e-274 950.3 897 58.9
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 1.8e-274 949.5 898 57.6
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 2.3e-274 949.1 911 56.3
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 3.0e-274 948.7 903 56.1
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 1.9e-273 946.0 899 59.1
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 4.3e-273 944.9 899 56.7
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 4.3e-273 944.9 895 57.0
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 5.7e-273 944.5 898 56.6
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 7.4e-273 944.1 900 56.8
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 1.6e-272 943.0 896 57.8
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 2.2e-272 942.6 900 58.1
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 3.7e-272 941.8 908 58.3
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 6.3e-272 941.0 891 57.0
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 1.1e-271 940.3 908 58.3
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 2.4e-271 939.1 916 56.7
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 2.4e-271 939.1 894 56.5
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 2.4e-271 939.1 896 55.9
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 2.0e-270 936.0 898 56.2
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 3.4e-270 935.3 924 58.4
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 7.7e-270 934.1 885 56.8
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 1.7e-269 932.9 925 55.5
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 2.2e-269 932.6 923 57.5
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 2.9e-269 932.2 900 58.7
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 1.9e-268 929.5 901 57.8
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 1.2e-267 926.8 952 58.3
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 2.1e-267 926.0 905 56.4
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 2.7e-267 925.6 908 56.7
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 4.6e-267 924.9 915 56.1
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 7.9e-267 924.1 917 55.4
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 2.3e-266 922.5 897 56.4
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 5.1e-266 921.4 902 55.2
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 2.5e-265 919.1 896 56.5
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 2.5e-265 919.1 789 60.5
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 9.7e-265 917.1 914 54.8
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 3.7e-264 915.2 911 55.4
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 1.2e-262 910.2 918 55.6
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 2.0e-262 909.4 900 55.3
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 3.4e-262 908.7 862 58.4
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 1.4e-258 896.7 903 55.3
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 1.4e-258 896.7 854 56.9
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 1.8e-258 896.3 907 54.8
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 6.7e-258 894.4 947 53.4
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 5.7e-257 891.3 803 59.3
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 7.4e-257 891.0 910 53.5
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 1.7e-256 889.8 921 53.3
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.2e-256 889.4 903 55.3
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 1.8e-255 886.3 893 54.4
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 9.1e-255 884.0 430 99.8
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 1.5e-254 883.2 920 54.5
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 2.6e-254 882.5 892 54.4
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 1.0e-253 880.6 907 55.0
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 1.0e-253 880.6 907 53.7
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 2.2e-253 879.4 911 54.1
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 2.5e-252 875.9 922 53.7
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 1.2e-251 873.6 753 60.7
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 1.2e-251 873.6 906 53.2
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 1.6e-251 873.2 904 52.9
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 3.6e-251 872.1 917 53.8
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 8.0e-251 870.9 918 53.2
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 8.0e-251 870.9 902 54.3
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 1.8e-250 869.8 920 53.3
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 3.9e-250 868.6 901 52.4
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 5.2e-250 868.2 918 53.1
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 8.8e-250 867.5 918 53.1
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 1.1e-249 867.1 919 54.0
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 1.7e-248 863.2 917 53.4
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 3.7e-248 862.1 816 56.6
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 1.8e-247 859.8 905 54.3
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 2.4e-247 859.4 929 53.1
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 4.1e-247 858.6 814 57.4
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 5.3e-247 858.2 898 53.6
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 3.8e-245 852.0 590 73.2
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 1.6e-243 846.7 811 57.0
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 2.1e-243 846.3 900 52.8
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 5.2e-242 841.6 785 57.1
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 2.2e-240 836.3 870 55.4
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 2.8e-240 835.9 800 54.9
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.2e-237 826.2 900 51.9
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 2.6e-233 812.8 893 51.4
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 7.2e-228 794.7 624 65.2
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 3.4e-225 785.8 824 53.2
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 1.0e-221 774.2 838 53.1
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 1.3e-213 747.3 811 50.9
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 2.3e-213 746.5 1001 46.0
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 8.0e-211 738.0 810 49.8
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 9.9e-201 704.5 924 46.3
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 1.7e-200 703.7 811 46.1
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 2.2e-200 703.4 801 48.9
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 7.3e-196 688.3 800 49.0
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 5.8e-193 678.7 911 44.5
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 1.6e-190 670.6 770 49.7
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 4.2e-183 646.0 805 46.8
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 9.3e-183 644.8 611 54.5
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 6.2e-171 605.5 539 57.3
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 7.9e-166 588.6 794 41.9
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 2.8e-163 580.1 574 52.4
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.5e-161 574.3 795 41.5
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.1e-156 558.1 590 47.6
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 1.3e-152 544.7 530 55.8
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 4.8e-147 526.2 733 43.0
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 3.1e-146 523.5 590 51.4
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 3.8e-144 516.5 590 50.3
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 2.0e-137 494.2 615 43.3
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 2.8e-123 447.2 552 46.0
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 6.2e-102 376.3 577 38.8
BolC4t23456H Brassica oleracea HOM05D003973 ORTHO05D004679 3.9e-96 357.1 267 65.5
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.7e-89 334.3 428 46.5
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 4.6e-89 333.6 580 35.3
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 6.8e-85 319.7 450 42.9
C04p19230 Brassica napus HOM05D003973 ORTHO05D004679 8.6e-80 302.8 267 58.8
BcaC02g11207 Brassica carinata HOM05D003973 ORTHO05D004679 2.0e-68 265.0 175 71.4
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 4.9e-67 260.4 179 64.2
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 1.2e-60 239.2 392 41.3
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 4.5e-60 237.3 705 27.0
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 6.5e-51 206.8 368 44.3
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 1.0e-43 183.0 526 25.5
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 1.7e-43 182.2 504 26.0
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 2.0e-31 142.1 82 81.7
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 6.1e-25 120.6 185 41.6
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 9.4e-18 96.7 65 70.8
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 6.1e-17 94.0 123 48.8
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 4.4e-15 87.8 83 48.2
VMungo0720G0978 Vigna mungo HOM05D003973 ORTHO05D435101 8.5e-11 73.6 153 33.3
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 2.5e-10 72.0 50 66.0


User provided reference genes

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