Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024714 Chenopodium quinoa HOM05D031246 ORTHO05D000368 2.3e-125 452.2 223 100.0
AUR62034809 Chenopodium quinoa HOM05D000576 ORTHO05D000368 2.5e-47 193.0 198 55.6
AUR62013515 Chenopodium quinoa HOM05D000576 ORTHO05D000368 3.3e-47 192.6 187 57.8
EL10Ac9g20900 Beta vulgaris HOM05D000576 ORTHO05D000368 5.8e-44 181.8 193 54.4
AUR62003536 Chenopodium quinoa HOM05D002507 ORTHO05D003045 3.6e-38 162.5 169 52.7
Ah.05g172260 Amaranthus hybridus HOM05D000576 ORTHO05D000368 1.1e-34 151.0 150 56.0
AUR62020166 Chenopodium quinoa HOM05D000576 ORTHO05D000368 7.8e-33 144.8 157 49.0
AUR62008119 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.9e-31 140.2 133 58.6
EL10Ac1g02073 Beta vulgaris HOM05D000576 ORTHO05D000368 2.4e-26 123.2 185 41.1
AUR62040583 Chenopodium quinoa HOM05D000576 ORTHO05D000368 7.9e-25 118.2 127 54.3
AUR62014549 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.5e-23 114.0 185 40.5
Hund00349 Selenicereus undatus HOM05D000576 ORTHO05D000368 4.8e-22 109.0 146 45.2
Ah.08g220280 Amaranthus hybridus HOM05D000576 ORTHO05D000368 1.5e-20 104.0 198 38.4
Gohir.D02G143600 Gossypium hirsutum HOM05D000576 ORTHO05D000368 2.4e-18 96.7 210 32.9
Gorai.005G161100 Gossypium raimondii HOM05D000576 ORTHO05D000368 2.4e-18 96.7 210 32.9
AUR62032104 Chenopodium quinoa HOM05D031246 ORTHO05D000368 1.2e-17 94.4 116 43.1
AUR62034932 Chenopodium quinoa HOM05D031246 ORTHO05D000368 6.0e-17 92.0 112 46.4
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.0e-16 91.3 179 34.6
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.8e-16 90.5 183 36.1
COL.COLO4_13160 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.7e-16 88.6 210 31.0
AUR62008954 Chenopodium quinoa HOM05D000576 ORTHO05D000368 2.5e-15 86.7 156 38.5
QL10p004694 Quercus lobata HOM05D000576 ORTHO05D000368 2.5e-15 86.7 183 35.5
Hma1.2p1_0670F.1_g200460 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.3e-15 85.9 178 35.4
QL10p004673 Quercus lobata HOM05D000576 ORTHO05D000368 7.4e-15 85.1 188 34.0
Duzib248G1067 Durio zibethinus HOM05D000576 ORTHO05D000368 1.6e-14 84.0 213 31.0
Lsat_1_v5_gn_9_62080 Lactuca sativa HOM05D000576 ORTHO05D000368 3.7e-14 82.8 185 31.4
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.8e-14 82.4 186 32.3
Lj6A233T25 Lonicera japonica HOM05D000576 ORTHO05D000368 6.2e-14 82.0 200 38.0
COL.COLO4_27090 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.4e-13 80.1 211 29.9
Eucgr.K02764 Eucalyptus grandis HOM05D000576 ORTHO05D000368 2.4e-13 80.1 205 32.2
QL10p005093 Quercus lobata HOM05D000576 ORTHO05D000368 5.3e-13 79.0 185 31.9
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 9.0e-13 78.2 185 30.3
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.2e-12 77.8 190 34.2
Rhsim07G0244200 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.0e-12 77.0 191 32.5
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 3.4e-12 76.3 184 33.7
Rhsim09G0154700 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.4e-12 76.3 187 31.6
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 5.8e-12 75.5 188 33.0
HanXRQChr09g0251901 Helianthus annuus HOM05D000576 ORTHO05D000368 5.8e-12 75.5 189 30.7
Rhsim10G0000100 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.8e-12 75.5 185 30.3
Migut.I01059 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.6e-12 75.1 184 33.2
Gohir.A03G120400 Gossypium hirsutum HOM05D000576 ORTHO05D000368 7.6e-12 75.1 158 34.2
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.0e-11 74.7 195 30.8
Lj8C98G11 Lonicera japonica HOM05D000576 ORTHO05D000368 1.0e-11 74.7 194 31.4
Lj8C98T11 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-11 73.9 194 31.4
Peaxi162Scf00215g01211 Petunia axillaris HOM05D000576 ORTHO05D000368 2.9e-11 73.2 180 27.8
QL10p009633 Quercus lobata HOM05D000576 ORTHO05D000368 3.8e-11 72.8 202 30.7
TWI18G0117 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.9e-11 72.4 191 33.5
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.4e-11 71.6 183 30.6
COL.COLO4_14292 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.1e-10 71.2 186 32.8
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.1e-10 71.2 186 33.3
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 1.1e-10 71.2 186 32.8
Manes.10G076100 Manihot esculenta HOM05D000576 ORTHO05D000368 1.1e-10 71.2 206 29.1
Ciclev10015410m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.9e-10 70.5 194 28.4
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.5e-10 70.1 210 25.2
TWI18G0229 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.2e-10 69.7 191 33.0
Ciclev10008333m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.2e-10 69.3 185 31.4
Phvul.011G078500 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 5.5e-10 68.9 195 30.3
Prupe.1G496400 Prunus persica HOM05D000576 ORTHO05D000368 7.1e-10 68.6 187 30.5
RcHm_v2.0_Chr6g0295841 Rosa chinensis HOM05D000576 ORTHO05D000368 7.1e-10 68.6 83 39.8
COL.COLO4_27089 Corchorus olitorius HOM05D000576 ORTHO05D000368 9.3e-10 68.2 215 29.3
Migut.E00768 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.3e-10 68.2 183 29.5
FAN01G1348 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.3e-10 68.2 189 28.0
Nitab4.5_0000397g0190 Nicotiana tabacum HOM05D000576 ORTHO05D000368 9.3e-10 68.2 190 28.4
Rhsim11G0190200 Rhododendron simsii HOM05D000576 ORTHO05D000368 9.3e-10 68.2 187 33.7
MELO3C026220.2 Cucumis melo HOM05D000576 ORTHO05D000368 1.2e-09 67.8 192 31.8
Lju5057A0T61 Lonicera japonica HOM05D000576 ORTHO05D000368 1.2e-09 67.8 203 29.6
COL.COLO4_25985 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.6e-09 67.4 201 29.4
ECA232G4459 Erigeron canadensis HOM05D000576 ORTHO05D000368 1.6e-09 67.4 181 30.4
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-09 67.4 181 33.7
Lj1C59T9 Lonicera japonica HOM05D000576 ORTHO05D000368 1.6e-09 67.4 184 34.8
Lj6P729T22 Lonicera japonica HOM05D000576 ORTHO05D000368 1.6e-09 67.4 183 32.2
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.1e-09 67.0 182 31.3
MD02G1120500 Malus domestica HOM05D000576 ORTHO05D000368 2.1e-09 67.0 193 28.5
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.1e-09 67.0 193 26.4
MD02G1120400 Malus domestica HOM05D000576 ORTHO05D000368 2.7e-09 66.6 195 29.2
Prupe.3G136800 Prunus persica HOM05D000576 ORTHO05D000368 2.7e-09 66.6 188 32.4
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.7e-09 66.6 207 29.5
TWI73G0365 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.7e-09 66.6 193 30.6
CSS0021660 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 3.5e-09 66.2 127 36.2
Migut.I01153 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.5e-09 66.2 187 28.9
FvH4_7g08150 Fragaria vesca HOM05D000576 ORTHO05D000368 3.5e-09 66.2 182 28.6
FAN06G0443 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.5e-09 66.2 182 28.6
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 3.5e-09 66.2 192 29.2
COL.COLO4_22884 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.6e-09 65.9 178 29.2
COL.COLO4_34465 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.6e-09 65.9 187 29.4
Gorai.004G137200 Gossypium raimondii HOM05D000576 ORTHO05D000368 4.6e-09 65.9 192 29.2
Prupe.1G496800 Prunus persica HOM05D000576 ORTHO05D000368 4.6e-09 65.9 132 33.3
Eucgr.L01412 Eucalyptus grandis HOM05D000576 ORTHO05D000368 7.9e-09 65.1 189 31.7
Gohir.A11G287923 Gossypium hirsutum HOM05D000576 ORTHO05D000368 7.9e-09 65.1 207 32.9
Medtr4g103670 Medicago truncatula HOM05D000576 ORTHO05D000368 7.9e-09 65.1 189 30.2
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 7.9e-09 65.1 182 30.2
Migut.J00219 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.3e-08 64.3 178 30.3
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.8e-08 63.9 198 29.8
FAN01G1594 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.8e-08 63.9 182 28.0
Migut.J00273 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.3e-08 63.5 198 30.8
TWI31G0199 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.3e-08 63.5 179 28.5
Migut.B01302 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-08 63.2 187 28.3
Migut.N01947 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-08 63.2 185 29.7
QL10p040220 Quercus lobata HOM05D000576 ORTHO05D000368 3.0e-08 63.2 188 28.7
Migut.O00220 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.9e-08 62.8 184 28.8
Glyma.05G047000 Glycine max HOM05D000576 ORTHO05D000368 3.9e-08 62.8 200 29.5
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 5.1e-08 62.4 185 30.8
Lj5A96T52 Lonicera japonica HOM05D000576 ORTHO05D000368 5.1e-08 62.4 187 27.8
RcHm_v2.0_Chr7g0197551 Rosa chinensis HOM05D000576 ORTHO05D000368 5.1e-08 62.4 198 26.3
Migut.G01314 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.7e-08 62.0 196 30.1
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 6.7e-08 62.0 188 30.3
Duzib128G1143 Durio zibethinus HOM05D000576 ORTHO05D000368 8.7e-08 61.6 186 29.0
Prupe.1G269300 Prunus persica HOM05D000576 ORTHO05D000368 8.7e-08 61.6 215 28.4
Migut.J00888 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-07 61.2 182 30.8
Eucgr.J01297 Eucalyptus grandis HOM05D000576 ORTHO05D000368 1.1e-07 61.2 189 31.2
Lj7P375T27 Lonicera japonica HOM05D000576 ORTHO05D000368 1.1e-07 61.2 96 37.5
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.1e-07 61.2 203 27.1
CsaV3_1G000750 Cucumis sativus L. HOM05D000576 ORTHO05D000368 1.5e-07 60.8 189 30.2
Migut.G01313 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.5e-07 60.8 196 30.1
COL.COLO4_20448 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.9e-07 60.5 218 31.2
Prupe.1G496600 Prunus persica HOM05D000576 ORTHO05D000368 1.9e-07 60.5 77 41.6
TPR.G30007 Trifolium pratense HOM05D000576 ORTHO05D000368 1.9e-07 60.5 189 29.1
Rhsim07G0191400 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.5e-07 60.1 184 28.8
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.5e-07 60.1 190 26.3
Migut.I00397 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.3e-07 59.7 184 29.9
Migut.I01154 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.3e-07 59.7 187 26.7
Gohir.A08G113400 Gossypium hirsutum HOM05D000576 ORTHO05D000368 3.3e-07 59.7 192 28.1
Gohir.A11G287782 Gossypium hirsutum HOM05D000576 ORTHO05D000368 3.3e-07 59.7 207 28.0
Prupe.1G496000 Prunus persica HOM05D000576 ORTHO05D000368 3.3e-07 59.7 77 42.9
Prupe.8G038200 Prunus persica HOM05D000576 ORTHO05D000368 4.3e-07 59.3 185 27.6
SGA_v2.0_scaffold225G42991 Striga asiatica HOM05D000576 ORTHO05D000368 4.3e-07 59.3 186 30.6
Thecc.02G282900 Theobroma cacao HOM05D000576 ORTHO05D000368 4.3e-07 59.3 126 34.1
Gorai.007G326800 Gossypium raimondii HOM05D000576 ORTHO05D000368 5.7e-07 58.9 206 29.1
Hund02870 Selenicereus undatus HOM05D000576 ORTHO05D000368 5.7e-07 58.9 209 27.3
VMungo1215G3115 Vigna mungo HOM05D000576 ORTHO05D000368 5.7e-07 58.9 187 28.9
COL.COLO4_09429 Corchorus olitorius HOM05D000189 ORTHO05D007610 7.4e-07 58.5 233 28.8
Dinv11096 Davidia involucrata HOM05D000576 ORTHO05D000368 7.4e-07 58.5 126 34.9
Nitab4.5_0000099g0260 Nicotiana tabacum HOM05D000576 ORTHO05D000368 7.4e-07 58.5 184 29.3
Peaxi162Scf00945g00015 Petunia axillaris HOM05D000576 ORTHO05D000368 7.4e-07 58.5 187 30.5
FvH4_6g01230 Fragaria vesca HOM05D000576 ORTHO05D000368 9.6e-07 58.2 198 25.8
FvH4_6g01850 Fragaria vesca HOM05D000576 ORTHO05D000368 9.6e-07 58.2 202 27.2
Hma1.2p1_2024F.1_g311420 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 9.6e-07 58.2 208 29.8
RcHm_v2.0_Chr1g0330451 Rosa chinensis HOM05D000576 ORTHO05D000368 9.6e-07 58.2 185 30.8
AUR62013079 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.3e-06 57.8 194 30.9
FAN05G5241 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-06 57.8 201 26.9
FAN14G0093 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-06 57.8 198 25.8
FAN05G4495 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-06 57.4 193 25.9
Duzib128G0572 Durio zibethinus HOM05D000576 ORTHO05D000368 2.1e-06 57.0 133 33.1
Duzib128G1573 Durio zibethinus HOM05D000576 ORTHO05D000368 2.1e-06 57.0 133 33.1
Nitab4.5_0001479g0090 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.1e-06 57.0 102 34.3
HPP92_017621 Vanilla planifolia HOM05D000576 ORTHO05D000368 2.8e-06 56.6 216 27.3
FvH4_7g10620 Fragaria vesca HOM05D014127 ORTHO05D015665 3.7e-06 56.2 94 36.2
FAN06G0521 Fragaria x ananassa HOM05D014127 ORTHO05D015665 3.7e-06 56.2 94 36.2
Nitab4.5_0000068g0490 Nicotiana tabacum HOM05D000576 ORTHO05D000368 3.7e-06 56.2 180 30.6
TAR496G0003 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.7e-06 56.2 186 27.4
Cc02_g27910 Coffea canephora HOM05D000576 ORTHO05D000368 4.8e-06 55.8 207 28.5
Glyma.12G068200 Glycine max HOM05D000576 ORTHO05D000368 4.8e-06 55.8 203 26.6
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 4.8e-06 55.8 186 28.5
Peaxi162Scf00066g01414 Petunia axillaris HOM05D000576 ORTHO05D000368 4.8e-06 55.8 197 29.9
FAN05G5357 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.3e-06 55.5 198 25.3
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 8.2e-06 55.1 186 30.1
Migut.H01270 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.2e-06 55.1 204 28.4
Prupe.3G257200 Prunus persica HOM05D000576 ORTHO05D000368 8.2e-06 55.1 187 26.2
TWI63G1035 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 8.2e-06 55.1 190 25.3


User provided reference genes

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