Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 3.2e-137 491.9 272 100.0
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 3.8e-114 415.2 272 80.5
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 3.4e-99 365.5 212 84.4
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 3.1e-92 342.4 212 76.4
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 4.1e-92 342.0 212 75.5
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 5.9e-91 338.2 212 75.5
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 5.5e-89 331.6 212 74.1
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.1e-88 329.7 247 67.6
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 2.1e-88 329.7 212 73.1
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 4.7e-88 328.6 212 74.1
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 6.1e-88 328.2 212 72.6
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 8.0e-88 327.8 245 66.1
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.4e-87 327.0 201 75.1
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 1.8e-87 326.6 212 73.6
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.0e-87 325.9 211 73.5
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 4.0e-87 325.5 212 74.1
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 5.2e-87 325.1 218 71.1
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 6.7e-87 324.7 212 72.6
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 8.8e-87 324.3 212 71.7
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.5e-86 323.6 212 72.2
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 1.5e-86 323.6 212 69.3
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 2.6e-86 322.8 211 73.0
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 2.6e-86 322.8 212 72.2
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 2.6e-86 322.8 212 72.2
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 2.6e-86 322.8 212 72.2
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 3.3e-86 322.4 212 73.6
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 4.4e-86 322.0 212 70.8
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 4.4e-86 322.0 211 72.5
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 4.4e-86 322.0 212 71.7
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 5.7e-86 321.6 216 70.8
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 9.7e-86 320.9 212 71.2
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 9.7e-86 320.9 212 72.2
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.3e-85 320.5 211 73.0
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.3e-85 320.5 212 72.6
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 2.8e-85 319.3 212 71.7
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 6.3e-85 318.2 212 69.8
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 6.3e-85 318.2 211 71.6
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 8.2e-85 317.8 212 69.8
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 8.2e-85 317.8 212 70.8
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 1.1e-84 317.4 211 71.1
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 1.1e-84 317.4 212 71.7
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 1.4e-84 317.0 212 69.8
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 3.1e-84 315.8 211 71.6
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 4.1e-84 315.5 212 71.2
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 5.3e-84 315.1 212 71.2
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 7.0e-84 314.7 245 63.3
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 7.0e-84 314.7 212 70.3
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 2.7e-83 312.8 212 66.5
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 3.5e-83 312.4 211 70.1
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 4.5e-83 312.0 211 69.2
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 1.3e-82 310.5 230 65.2
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 1.3e-82 310.5 226 66.8
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 2.2e-82 309.7 211 69.2
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 2.9e-82 309.3 243 62.1
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 3.8e-82 308.9 249 62.2
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 5.0e-82 308.5 211 67.8
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.5e-81 307.0 212 67.0
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 4.2e-81 305.4 208 71.6
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 7.2e-81 304.7 207 67.6
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 9.4e-81 304.3 212 67.9
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.2e-80 303.9 211 67.3
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.2e-80 303.9 212 67.9
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 2.1e-80 303.1 227 64.3
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 2.7e-80 302.8 211 66.8
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 2.7e-80 302.8 202 71.3
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 6.1e-80 301.6 211 65.4
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 8.0e-80 301.2 211 66.4
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 8.0e-80 301.2 212 68.4
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.0e-79 300.8 211 66.4
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 3.0e-79 299.3 208 66.8
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 4.0e-79 298.9 212 66.5
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 4.0e-79 298.9 212 65.6
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 6.8e-79 298.1 212 66.5
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 6.8e-79 298.1 261 57.9
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 8.8e-79 297.7 211 65.4
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 5.7e-78 295.0 211 64.9
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 8.3e-77 291.2 250 57.2
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 2.0e-75 286.6 212 64.6
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 2.7e-75 286.2 195 69.2
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 5.9e-75 285.0 219 62.6
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 1.1e-73 280.8 211 63.0
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.2e-73 279.3 211 66.8
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 4.2e-73 278.9 253 56.1
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 4.9e-69 265.4 212 63.7
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 7.0e-68 261.5 212 61.8
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 1.0e-66 257.7 247 56.7
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.5e-65 253.8 164 71.3
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 1.2e-64 250.8 248 49.2
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.2e-64 250.8 211 59.2
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 1.4e-60 237.3 249 51.4
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 3.2e-60 236.1 213 51.6
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 5.4e-60 235.3 382 37.4
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 2.7e-59 233.0 229 50.7
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 2.1e-56 223.4 148 68.9
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 8.0e-56 221.5 245 53.1
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 2.0e-54 216.9 148 66.9
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 8.6e-50 201.4 211 49.3
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 8.1e-40 168.3 128 63.3
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 1.7e-37 160.6 126 59.5
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 8.4e-37 158.3 90 82.2
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 1.1e-31 141.4 101 67.3
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 2.4e-31 140.2 99 66.7
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 3.8e-29 132.9 89 67.4
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.4e-23 114.4 73 68.5
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 5.8e-22 109.0 149 36.9
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 3.5e-19 99.8 73 60.3
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 6.0e-19 99.0 58 79.3
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 2.4e-12 77.0 49 75.5
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 5.5e-12 75.9 57 52.6
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 2.7e-11 73.6 59 64.4
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.3e-10 71.2 55 50.9
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 9.6e-09 65.1 153 29.4
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 4.8e-08 62.8 107 31.8
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 8.1e-08 62.0 86 46.5


User provided reference genes

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