Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.9e-116 422.5 215 100.0
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.8e-98 362.8 201 93.5
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 1.4e-74 283.5 209 74.6
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 8.0e-67 257.7 216 69.0
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 3.7e-48 195.7 204 55.4
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 2.5e-44 183.0 203 51.7
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 1.1e-42 177.6 203 50.7
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.8e-42 176.8 199 48.2
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.8e-42 176.8 199 48.2
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 1.8e-42 176.8 200 49.5
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 5.2e-42 175.3 203 50.2
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 1.5e-41 173.7 196 50.5
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 3.4e-41 172.6 202 49.5
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 5.8e-41 171.8 200 51.5
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 7.5e-41 171.4 200 47.5
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 1.3e-40 170.6 199 48.7
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 1.7e-40 170.2 192 53.1
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 3.7e-40 169.1 203 48.8
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 4.9e-40 168.7 210 48.6
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 6.4e-40 168.3 200 47.0
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 6.4e-40 168.3 201 48.8
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 6.4e-40 168.3 203 49.8
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 1.1e-39 167.5 198 53.0
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 1.4e-39 167.2 193 51.3
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 1.9e-39 166.8 197 50.8
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 4.1e-39 165.6 201 47.3
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 5.4e-39 165.2 201 47.3
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 9.2e-39 164.5 192 50.0
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 9.2e-39 164.5 206 47.6
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 1.2e-38 164.1 201 48.3
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 3.5e-38 162.5 198 50.0
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 3.5e-38 162.5 198 50.0
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 4.6e-38 162.2 196 52.0
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 4.6e-38 162.2 197 45.2
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 2.3e-37 159.8 198 49.0
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 3.0e-37 159.5 202 47.0
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 3.0e-37 159.5 200 45.5
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 3.9e-37 159.1 203 50.2
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 3.9e-37 159.1 199 50.3
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 3.9e-37 159.1 201 48.8
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 5.1e-37 158.7 202 43.1
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 5.1e-37 158.7 198 47.0
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 6.6e-37 158.3 186 46.8
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 6.6e-37 158.3 200 49.5
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 8.6e-37 157.9 206 43.7
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 8.6e-37 157.9 198 46.5
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 1.1e-36 157.5 199 45.2
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 1.5e-36 157.1 207 48.8
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 1.5e-36 157.1 199 45.2
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 1.9e-36 156.8 199 45.2
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 2.5e-36 156.4 179 50.3
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.5e-36 156.4 199 49.2
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 3.3e-36 156.0 205 48.8
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 4.3e-36 155.6 199 49.2
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 4.3e-36 155.6 199 49.2
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 4.3e-36 155.6 199 49.2
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 4.3e-36 155.6 189 48.7
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 5.6e-36 155.2 201 45.3
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 7.3e-36 154.8 198 49.0
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 9.5e-36 154.5 210 44.3
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 9.5e-36 154.5 202 45.5
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 1.6e-35 153.7 200 46.5
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 2.1e-35 153.3 199 45.2
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 2.1e-35 153.3 198 44.9
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 2.1e-35 153.3 208 45.7
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.8e-35 152.9 199 47.7
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.8e-35 152.9 200 47.0
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 2.8e-35 152.9 200 44.0
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 1.1e-34 151.0 199 46.2
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 1.8e-34 150.2 204 44.1
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 1.8e-34 150.2 203 44.8
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 2.3e-34 149.8 205 44.9
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 2.3e-34 149.8 198 44.4
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 3.1e-34 149.4 189 46.6
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 4.0e-34 149.1 208 45.2
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.2e-33 147.5 204 45.1
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 2.6e-33 146.4 204 45.1
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 2.6e-33 146.4 199 44.7
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 3.4e-33 146.0 198 43.9
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 3.4e-33 146.0 210 43.3
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 5.8e-33 145.2 199 43.7
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 7.6e-33 144.8 189 42.9
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 7.6e-33 144.8 207 44.4
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 7.6e-33 144.8 212 46.2
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 9.9e-33 144.4 197 43.7
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 1.3e-32 144.1 197 43.7
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 1.7e-32 143.7 210 44.8
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 1.9e-31 140.2 227 43.6
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 1.9e-31 140.2 207 44.0
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 3.2e-31 139.4 187 48.1
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 5.4e-31 138.7 197 45.2
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 9.2e-31 137.9 210 42.4
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.7e-30 136.3 203 44.8
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 2.7e-30 136.3 199 42.7
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 2.7e-30 136.3 162 48.8
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 2.7e-30 136.3 162 48.8
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 3.5e-30 136.0 201 42.3
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 1.0e-29 134.4 203 43.3
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 1.3e-29 134.0 199 43.7
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 3.0e-29 132.9 184 40.8
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 2.5e-28 129.8 200 43.0
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 9.6e-28 127.9 198 42.4
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 4.4e-25 119.0 186 40.9
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.3e-24 117.5 186 40.3
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 8.4e-24 114.8 204 38.2
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 3.5e-22 109.4 97 55.7
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 1.7e-21 107.1 199 39.7
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 9.6e-20 101.3 204 35.3
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 1.6e-19 100.5 205 34.6
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 1.8e-18 97.1 211 35.5
BcaB01g02078 Brassica carinata HOM05D006641 ORTHO05D007573 5.3e-18 95.5 213 33.3
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 2.0e-17 93.6 194 35.6
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 3.4e-17 92.8 214 33.6
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 3.4e-17 92.8 214 33.6
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 4.5e-17 92.4 214 34.1
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 7.6e-17 91.7 216 33.8
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 2.9e-16 89.7 212 35.4
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 4.9e-16 89.0 214 32.2
Carub.0006s3513 Capsella rubella HOM05D006641 ORTHO05D007573 4.9e-16 89.0 207 33.3
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 8.4e-16 88.2 162 40.7
Aa31LG5G1730 Aethionema arabicum HOM05D006641 ORTHO05D007573 4.2e-15 85.9 200 32.5
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 5.4e-15 85.5 212 33.0
TWI75G0789 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 7.1e-15 85.1 109 46.8
Thhalv10029320m.g Eutrema salsugineum HOM05D006641 ORTHO05D007573 9.3e-15 84.7 222 30.6
Os03g0305200 Oryza sativa ssp. japonica HOM05D006641 ORTHO05D007573 3.0e-13 79.7 216 30.1
CDE05G1007 Ceratophyllum demersum HOM05D006641 ORTHO05D007573 5.6e-12 75.5 121 36.4
SEGI_39105 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 7.4e-12 75.1 192 30.7
Zm00001eb396340 Zea mays HOM05D006641 ORTHO05D007573 9.6e-12 74.7 213 28.2
Psat4g000040 Pisum sativum HOM05D007478 ORTHO05D001700 6.2e-11 72.0 186 29.6
ATR0326G068 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.4e-10 70.9 195 31.3
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 5.3e-10 68.9 188 28.2
Medtr8g107420 Medicago truncatula HOM05D007478 ORTHO05D001700 9.0e-10 68.2 186 28.5
HPP92_018375 Vanilla planifolia HOM05D006641 ORTHO05D007573 1.2e-09 67.8 199 30.2
Glyma.08G055200 Glycine max HOM05D007478 ORTHO05D001700 2.6e-09 66.6 172 27.9
VMungo0251G2682 Vigna mungo HOM05D007478 ORTHO05D001700 4.5e-09 65.9 188 26.6
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 5.8e-09 65.5 197 28.4
CDE06G0938 Ceratophyllum demersum HOM05D001935 ORTHO05D001700 7.6e-09 65.1 179 33.0
Phvul.002G330900 Phaseolus vulgaris HOM05D007478 ORTHO05D001700 1.3e-08 64.3 188 25.5
TPR.G1399 Trifolium pratense HOM05D007478 ORTHO05D001700 1.3e-08 64.3 189 28.6
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.7e-08 63.9 191 27.7
Gorai.001G084400 Gossypium raimondii HOM05D001935 ORTHO05D001700 1.7e-08 63.9 192 29.7
Glyma.05G246800 Glycine max HOM05D007478 ORTHO05D001700 2.9e-08 63.2 189 27.5
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 2.9e-08 63.2 181 29.3
Zm00001eb014520 Zea mays HOM05D006641 ORTHO05D007573 2.9e-08 63.2 206 29.6
Ca_17182_v3 Cicer arietinum L. HOM05D007478 ORTHO05D001700 3.8e-08 62.8 186 28.0
SGA_v2.0_scaffold14G06923 Striga asiatica HOM05D001935 ORTHO05D001700 3.8e-08 62.8 104 35.6
Gohir.A07G075100 Gossypium hirsutum HOM05D001935 ORTHO05D001700 8.4e-08 61.6 192 29.2
Gohir.D07G079675 Gossypium hirsutum HOM05D001935 ORTHO05D001700 1.1e-07 61.2 192 29.2
PGR042G0803 Punica granatum HOM05D001935 ORTHO05D001700 1.4e-07 60.8 174 29.9
MBI10_g37756_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 5.5e-07 58.9 102 34.3
CANSAT78G1422 Cannabis sativa HOM05D001935 ORTHO05D001700 7.1e-07 58.5 173 28.9
CiPaw.15G144400 Carya illinoinensis HOM05D007478 ORTHO05D001700 7.1e-07 58.5 171 25.7
Lj6P749T50 Lonicera japonica HOM05D001935 ORTHO05D001700 7.1e-07 58.5 192 27.6
Lj4g0014270 Lotus japonicus HOM05D007478 ORTHO05D001700 7.1e-07 58.5 188 25.5
SalBow8G0261 Salvia bowleyana HOM05D001935 ORTHO05D001700 7.1e-07 58.5 69 43.5
Thecc.03G058400 Theobroma cacao HOM05D007478 ORTHO05D001700 7.1e-07 58.5 188 26.6
unitig_24.g30589 Utricularia gibba HOM05D001935 ORTHO05D001700 7.1e-07 58.5 79 38.0
unitig_22.g5581 Utricularia gibba HOM05D001935 ORTHO05D001700 9.3e-07 58.2 79 38.0
DCAR_007278 Daucus carota HOM05D001935 ORTHO05D001700 1.2e-06 57.8 66 43.9
SEGI_32719 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.2e-06 57.8 177 30.5
THA.LOC104802908 Tarenaya hassleriana HOM05D001935 ORTHO05D001700 2.1e-06 57.0 204 26.5
Lalb_Chr05g0221601 Lupinus albus HOM05D007478 ORTHO05D001700 3.5e-06 56.2 171 27.5
Oeu004315.1 Olea europaea HOM05D001935 ORTHO05D001700 3.5e-06 56.2 178 28.7
Peaxi162Scf39498g00005 Petunia axillaris HOM05D001935 ORTHO05D001700 3.5e-06 56.2 193 27.5
Sopen02g035810 Solanum pennellii HOM05D001935 ORTHO05D001700 3.5e-06 56.2 184 27.2
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 3.5e-06 56.2 171 25.1
Peaxi162Scf00119g00143 Petunia axillaris HOM05D001935 ORTHO05D001700 4.6e-06 55.8 172 26.2
THA.LOC104827233 Tarenaya hassleriana HOM05D001935 ORTHO05D001700 4.6e-06 55.8 90 36.7
MSTRG.13570 Avicennia marina HOM05D001935 ORTHO05D001700 6.0e-06 55.5 84 39.3
HanXRQChr08g0212901 Helianthus annuus HOM05D001935 ORTHO05D001700 6.0e-06 55.5 195 27.7
PGR102G2009 Punica granatum HOM05D001935 ORTHO05D001700 6.0e-06 55.5 174 26.4
Sabra04G0063200 Salix brachista HOM05D001935 ORTHO05D001700 6.0e-06 55.5 182 26.4
Actinidia36351 Actinidia chinensis HOM05D001935 ORTHO05D001700 7.9e-06 55.1 121 31.4
Lsat_1_v5_gn_4_15421 Lactuca sativa HOM05D001935 ORTHO05D001700 7.9e-06 55.1 179 27.4
Lj2g0026095 Lotus japonicus HOM05D001935 ORTHO05D001700 7.9e-06 55.1 192 27.6
Prupe.3G150600 Prunus persica HOM05D001935 ORTHO05D001700 7.9e-06 55.1 199 28.1


User provided reference genes

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