Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024629 Chenopodium quinoa HOM05D000886 ORTHO05D000525 1.1e-127 459.9 229 100.0
AUR62024628 Chenopodium quinoa HOM05D000886 ORTHO05D000525 1.3e-35 154.1 199 47.2
AUR62024614 Chenopodium quinoa HOM05D000886 ORTHO05D000525 2.7e-28 129.8 200 39.0
AUR62011771 Chenopodium quinoa HOM05D018970 ORTHO05D019524 4.6e-28 129.0 210 39.0
Ah.02g112490 Amaranthus hybridus HOM05D000886 ORTHO05D000525 6.8e-24 115.2 209 34.4
Ah.02g112500 Amaranthus hybridus HOM05D000886 ORTHO05D000525 3.6e-17 92.8 134 40.3
EL10As5g23567 Beta vulgaris HOM05D000886 ORTHO05D000525 1.4e-16 90.9 139 41.0
QL02p073879 Quercus lobata HOM05D000886 ORTHO05D000525 3.1e-16 89.7 215 31.2
Nn3g21760 Nelumbo nucifera HOM05D000886 ORTHO05D000525 2.6e-15 86.7 176 31.2
Haze_14765 Corylus avellana HOM05D000087 ORTHO05D001941 2.9e-14 83.2 197 34.5
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.0e-11 74.7 168 35.1
Psat6g160280 Pisum sativum HOM05D000886 ORTHO05D000525 2.3e-11 73.6 207 31.9
COL.COLO4_23200 Corchorus olitorius HOM05D000886 ORTHO05D000525 3.9e-11 72.8 223 27.8
Nitab4.5_0006171g0080 Nicotiana tabacum HOM05D000886 ORTHO05D000525 6.6e-11 72.0 166 33.7
PSO063G4532 Papaver somniferum HOM05D000886 ORTHO05D000525 1.9e-10 70.5 144 35.4
CsaV3_3G040060 Cucumis sativus L. HOM05D000886 ORTHO05D000525 4.3e-10 69.3 168 35.1
Hma1.2p1_0662F.1_g198230 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 4.3e-10 69.3 182 32.4
MELO3C009746.2 Cucumis melo HOM05D000886 ORTHO05D000525 7.3e-10 68.6 168 33.9
Peaxi162Scf00011g01434 Petunia axillaris HOM05D000886 ORTHO05D000525 1.3e-09 67.8 170 30.6
BcaC08g45192 Brassica carinata HOM05D000886 ORTHO05D000525 1.6e-09 67.4 210 28.1
A09p54320 Brassica napus HOM05D000886 ORTHO05D000525 1.6e-09 67.4 140 34.3
C06p28200 Brassica napus HOM05D000886 ORTHO05D000525 1.6e-09 67.4 210 28.1
BolC6t37986H Brassica oleracea HOM05D000886 ORTHO05D000525 1.6e-09 67.4 210 28.1
TPR.G1540 Trifolium pratense HOM05D000886 ORTHO05D000525 1.6e-09 67.4 206 26.7
Nitab4.5_0000787g0060 Nicotiana tabacum HOM05D000886 ORTHO05D000525 3.6e-09 66.2 169 32.0
ClCG10G016290 Citrullus lanatus HOM05D000886 ORTHO05D000525 4.8e-09 65.9 168 34.5
TPR.G40213 Trifolium pratense HOM05D000886 ORTHO05D000525 4.8e-09 65.9 148 33.1
BraA09t40844Z Brassica rapa HOM05D000886 ORTHO05D000525 6.2e-09 65.5 140 34.3
AUR62021037 Chenopodium quinoa HOM05D000886 ORTHO05D000525 6.2e-09 65.5 173 31.2
Sed0011417 Sechium edule HOM05D000886 ORTHO05D000525 8.1e-09 65.1 176 31.8
CAN.G809.12 Capsicum annuum HOM05D000886 ORTHO05D000525 1.8e-08 63.9 169 34.3
Phvul.007G212800 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 1.8e-08 63.9 217 28.1
BcaC07g42747 Brassica carinata HOM05D000886 ORTHO05D000525 2.4e-08 63.5 202 28.2
Lj3P844T47 Lonicera japonica HOM05D000886 ORTHO05D000525 2.4e-08 63.5 202 31.7
ATR0693G315 Amborella trichopoda HOM05D000886 ORTHO05D000525 4.0e-08 62.8 208 28.4
Thhalv10006447m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 4.0e-08 62.8 210 27.6
Sabra19G0033300 Salix brachista HOM05D008427 ORTHO05D010551 4.0e-08 62.8 150 28.7
EL10Ac3g07294 Beta vulgaris HOM05D000886 ORTHO05D000525 6.9e-08 62.0 168 31.5
CAN.G809.11 Capsicum annuum HOM05D000886 ORTHO05D000525 6.9e-08 62.0 169 33.1
Cfa007333 Carpinus fangiana HOM05D000886 ORTHO05D000525 6.9e-08 62.0 152 34.9
AT5G48350 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 9.0e-08 61.6 200 26.5
BcaC07g40717 Brassica carinata HOM05D000886 ORTHO05D000525 1.2e-07 61.2 138 31.2
Ca_10270_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.2e-07 61.2 141 33.3
PSO782G3268 Papaver somniferum HOM05D000886 ORTHO05D000525 1.2e-07 61.2 149 34.9
CiPaw.04G030000 Carya illinoinensis HOM05D000886 ORTHO05D000525 1.5e-07 60.8 137 32.8
COL.COLO4_03543 Corchorus olitorius HOM05D000886 ORTHO05D000525 1.5e-07 60.8 207 24.2
Oeu060772.1 Olea europaea HOM05D000886 ORTHO05D000525 1.5e-07 60.8 145 32.4
TAR374G1684 Trochodendron aralioides HOM05D000886 ORTHO05D000525 1.5e-07 60.8 175 30.9
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 1.5e-07 60.8 192 30.2
Lj8P110T28 Lonicera japonica HOM05D000886 ORTHO05D000525 2.0e-07 60.5 173 31.8
Aqoxy3G03479 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.6e-07 60.1 141 33.3
Nitab4.5_0000699g0130 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.6e-07 60.1 172 31.4
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.6e-07 60.1 173 31.8
Potri.019G021900 Populus trichocarpa HOM05D008427 ORTHO05D010551 2.6e-07 60.1 163 26.4
Lj4C788G2 Lonicera japonica HOM05D000886 ORTHO05D000525 3.4e-07 59.7 197 28.4
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 3.4e-07 59.7 201 28.9
AL2G23470 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 4.4e-07 59.3 150 30.7
FAN21G0926 Fragaria x ananassa HOM05D000886 ORTHO05D000525 4.4e-07 59.3 181 26.0
Thecc.01G317100 Theobroma cacao HOM05D000886 ORTHO05D000525 4.4e-07 59.3 142 31.7
Migut.J01614 Erythranthe guttata HOM05D000886 ORTHO05D000525 5.8e-07 58.9 167 31.7
Haze_20280 Corylus avellana HOM05D000886 ORTHO05D000525 7.6e-07 58.5 168 34.5
FAN11G2385 Fragaria x ananassa HOM05D000886 ORTHO05D000525 7.6e-07 58.5 213 25.4
Lj5g0012682 Lotus japonicus HOM05D000886 ORTHO05D000525 7.6e-07 58.5 146 33.6
Prupe.4G202600 Prunus persica HOM05D008427 ORTHO05D010551 7.6e-07 58.5 221 27.1
QL07p013665 Quercus lobata HOM05D000886 ORTHO05D000525 7.6e-07 58.5 189 30.2
Sc25g0005550 Simmondsia chinensis HOM05D000886 ORTHO05D000525 7.6e-07 58.5 196 30.1
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 9.9e-07 58.2 148 33.1
Atru.chr1.1368 Acer truncatum HOM05D000886 ORTHO05D000525 9.9e-07 58.2 141 34.8
arahy.Tifrunner.gnm1.ann1.3SM0CX Arachis hypogaea HOM05D000886 ORTHO05D000525 9.9e-07 58.2 216 26.4
Solyc01g103460.2 Solanum lycopersicum HOM05D000886 ORTHO05D000525 9.9e-07 58.2 168 29.8
Nitab4.5_0000642g0270 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.3e-06 57.8 170 31.8
Nitab4.5_0003544g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.3e-06 57.8 171 31.6
Oeu060771.1 Olea europaea HOM05D000886 ORTHO05D000525 1.3e-06 57.8 170 32.4
Nitab4.5_0000296g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.2e-06 57.0 168 32.7
PSO781G0111 Papaver somniferum HOM05D000886 ORTHO05D000525 2.2e-06 57.0 183 29.0
ClCG10G016300 Citrullus lanatus HOM05D000886 ORTHO05D000525 2.9e-06 56.6 183 28.4
HanXRQChr09g0255181 Helianthus annuus HOM05D000886 ORTHO05D000525 3.8e-06 56.2 178 29.8
BcaC08g45191 Brassica carinata HOM05D000886 ORTHO05D000525 4.9e-06 55.8 134 28.4
Psat3g135480 Pisum sativum HOM05D000886 ORTHO05D000525 4.9e-06 55.8 174 29.9
Rhsim04G0117600 Rhododendron simsii HOM05D000886 ORTHO05D000525 4.9e-06 55.8 176 32.4
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 4.9e-06 55.8 173 30.1
Actinidia38124 Actinidia chinensis HOM05D000886 ORTHO05D000525 6.4e-06 55.5 179 29.6
TPR.G1588 Trifolium pratense HOM05D000886 ORTHO05D000525 6.4e-06 55.5 145 31.7
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 8.4e-06 55.1 139 29.5
HanXRQChr15g0495491 Helianthus annuus HOM05D000886 ORTHO05D000525 8.4e-06 55.1 195 28.2
Sopen12g031440 Solanum pennellii HOM05D000886 ORTHO05D000525 8.4e-06 55.1 169 29.6


User provided reference genes

Program Settings