Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 2.9e-145 518.5 251 100.0
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 4.9e-132 474.6 249 93.2
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 6.2e-103 377.9 248 72.6
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.5e-85 318.5 253 64.0
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 1.1e-83 313.9 241 65.6
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 9.3e-83 310.8 234 62.4
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 2.7e-82 309.3 245 62.4
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.5e-80 303.5 248 58.1
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 8.1e-79 297.7 251 59.4
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 1.1e-78 297.4 249 57.0
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.1e-78 297.4 229 61.6
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 1.4e-78 297.0 229 62.4
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 1.4e-78 297.0 231 63.2
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 2.4e-78 296.2 241 58.9
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 3.1e-78 295.8 234 63.7
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 4.0e-78 295.4 230 63.0
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 7.6e-77 291.2 231 62.8
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 1.3e-76 290.4 231 61.9
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.1e-75 287.3 231 62.3
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 2.5e-75 286.2 251 58.6
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 2.5e-75 286.2 228 63.2
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 7.1e-75 284.6 238 58.4
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 2.1e-74 283.1 231 61.0
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.3e-73 280.4 259 57.1
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.3e-73 280.4 249 57.0
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 3.9e-73 278.9 247 57.5
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.1e-73 278.5 276 53.6
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 1.9e-72 276.6 234 59.8
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 3.7e-71 272.3 264 54.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 5.5e-67 258.5 239 54.0
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.6e-66 256.9 241 55.2
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 7.4e-64 248.1 246 55.3
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 2.4e-62 243.0 242 55.0
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 3.1e-62 242.7 246 54.9
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 6.9e-62 241.5 241 54.4
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.2e-61 240.7 251 52.2
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 3.4e-61 239.2 253 51.4
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.9e-60 236.1 240 52.5
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 3.8e-60 235.7 253 50.6
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 4.2e-59 232.3 249 49.8
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 1.2e-58 230.7 238 52.5
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 2.7e-58 229.6 247 51.8
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 7.9e-58 228.0 249 51.4
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 1.1e-56 224.2 230 52.2
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 1.1e-56 224.2 257 47.1
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 2.5e-56 223.0 231 52.8
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 4.3e-56 222.2 252 52.0
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 7.4e-56 221.5 249 50.2
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 9.7e-56 221.1 230 52.6
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.7e-55 220.3 230 52.2
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 2.8e-55 219.5 245 47.8
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 3.7e-55 219.2 249 49.4
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 6.3e-55 218.4 244 47.1
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 6.9e-54 214.9 248 48.0
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.1e-51 207.6 237 45.1
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 3.2e-51 206.1 236 47.5
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 2.1e-50 203.4 247 46.6
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 2.7e-50 203.0 239 48.5
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 2.7e-50 203.0 266 43.2
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 3.6e-50 202.6 244 47.1
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 3.6e-50 202.6 266 44.0
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 7.9e-50 201.4 251 45.0
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 1.0e-49 201.1 251 44.6
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.4e-49 200.7 251 45.0
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.8e-49 200.3 237 46.8
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 2.3e-49 199.9 248 48.4
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 6.7e-49 198.4 238 47.5
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 1.1e-48 197.6 241 46.5
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 2.0e-48 196.8 250 44.8
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 7.4e-48 194.9 261 44.4
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 7.4e-48 194.9 251 43.8
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 3.7e-47 192.6 251 43.8
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 4.8e-47 192.2 236 45.3
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 8.2e-47 191.4 245 44.9
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 8.2e-47 191.4 238 46.2
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 8.2e-47 191.4 239 45.6
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 8.2e-47 191.4 228 46.1
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.8e-46 190.3 236 46.2
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.8e-46 190.3 236 46.2
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 2.4e-46 189.9 236 44.5
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 4.1e-46 189.1 237 46.4
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.6e-45 187.2 230 44.3
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 2.6e-45 186.4 238 46.2
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 3.5e-45 186.0 254 42.1
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 5.0e-44 182.2 141 59.6
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 6.5e-44 181.8 254 41.3
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 3.6e-42 176.0 159 54.1
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 8.0e-42 174.9 289 37.0
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.8e-41 173.7 277 38.6
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 9.7e-40 167.9 131 63.4
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.7e-39 166.0 131 63.4
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 9.1e-38 161.4 207 48.3
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 2.2e-36 156.8 334 31.1
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 6.5e-36 155.2 234 38.5
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 8.3e-31 138.3 125 58.4
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 5.9e-29 132.1 150 49.3
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 6.5e-28 128.6 90 65.6
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 8.5e-28 128.3 108 58.3
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 5.7e-24 115.5 162 42.0
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 3.1e-22 109.8 90 62.2
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.5e-21 106.3 149 43.0
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 7.3e-19 98.6 194 33.5
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 3.7e-15 86.3 122 41.8
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 1.6e-13 80.9 228 26.8
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 8.9e-09 65.1 45 73.3
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 2.6e-08 63.5 278 22.7
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 4.9e-07 59.3 263 20.9
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 7.0e-06 55.5 261 24.5


User provided reference genes

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