Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.3e-214 748.0 362 100.0
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.4e-204 716.1 362 96.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 2.1e-197 692.2 359 92.8
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 8.7e-191 670.2 359 88.9
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.2e-186 655.6 360 86.7
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 6.5e-186 654.1 360 86.1
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 8.4e-186 653.7 360 85.8
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.4e-185 652.9 360 85.0
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 1.9e-185 652.5 360 85.3
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 9.3e-185 650.2 355 85.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 2.1e-184 649.0 360 84.4
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 2.7e-184 648.7 360 85.3
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 1.0e-183 646.7 358 85.2
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.8e-183 646.0 360 84.2
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.8e-183 646.0 360 84.7
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 2.3e-183 645.6 360 84.2
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.5e-182 642.9 360 83.3
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 9.6e-182 640.2 360 85.6
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 9.6e-182 640.2 360 83.9
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.3e-181 639.8 358 84.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.6e-181 639.4 360 83.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 2.8e-181 638.6 360 83.6
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 4.8e-181 637.9 358 83.8
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 6.3e-181 637.5 360 83.3
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 6.3e-181 637.5 358 84.6
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 8.2e-181 637.1 360 82.5
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.1e-180 636.7 360 82.8
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.1e-180 636.7 360 82.8
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.1e-180 636.7 357 84.0
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.1e-180 636.7 357 84.0
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.4e-180 636.3 360 83.3
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.4e-180 636.3 360 83.3
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.4e-180 636.3 360 81.7
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.4e-180 635.6 357 83.8
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.4e-180 635.6 360 81.7
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 4.1e-180 634.8 360 83.1
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 5.3e-180 634.4 360 83.3
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 5.3e-180 634.4 360 81.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.2e-179 633.3 357 82.9
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.2e-179 633.3 360 82.5
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 1.5e-179 632.9 357 83.8
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.0e-179 632.5 357 83.5
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.6e-179 632.1 360 81.9
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 3.4e-179 631.7 360 82.5
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 5.9e-179 630.9 358 82.7
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 7.6e-179 630.6 357 82.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 7.6e-179 630.6 357 82.6
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.3e-178 629.8 360 83.6
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.7e-178 629.4 360 81.7
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 5.0e-178 627.9 360 81.9
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 6.5e-178 627.5 360 81.1
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.5e-177 625.5 360 83.1
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 4.2e-177 624.8 361 81.7
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 4.2e-177 624.8 370 81.4
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 9.3e-177 623.6 360 81.4
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.2e-176 623.2 360 82.2
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.6e-176 622.9 360 81.9
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.7e-176 622.1 357 81.8
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 3.6e-176 621.7 360 82.5
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 6.1e-176 620.9 360 81.9
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.0e-175 618.6 359 81.3
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.9e-174 615.9 358 80.7
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.9e-174 615.9 360 81.1
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 2.5e-174 615.5 386 77.2
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 3.3e-174 615.1 355 82.0
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 4.3e-174 614.8 400 75.2
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 3.7e-173 611.7 358 79.3
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 4.8e-173 611.3 395 74.7
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 4.8e-173 611.3 416 72.1
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 8.2e-173 610.5 358 79.3
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 4.1e-172 608.2 358 78.5
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.1e-172 608.2 357 79.3
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 5.3e-172 607.8 358 78.5
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 6.9e-172 607.4 358 79.1
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 6.9e-172 607.4 358 79.1
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 6.9e-172 607.4 358 79.1
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 6.9e-172 607.4 358 79.1
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.5e-171 606.3 358 78.8
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.0e-170 603.6 427 70.7
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.0e-170 603.6 338 83.7
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.6e-168 596.3 386 73.1
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 4.6e-168 594.7 355 78.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 1.5e-166 589.7 356 77.8
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 3.3e-166 588.6 358 77.4
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 5.7e-166 587.8 358 78.2
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 9.7e-166 587.0 358 77.1
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 9.7e-166 587.0 357 77.3
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.3e-165 586.6 356 77.2
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 4.8e-165 584.7 356 77.0
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.1e-164 583.6 355 77.5
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 6.9e-164 580.9 353 76.5
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 3.4e-163 578.6 365 73.7
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.0e-162 577.0 314 87.9
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.0e-162 577.0 365 74.2
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.7e-157 558.5 356 74.2
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 2.6e-155 552.4 351 78.9
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.5e-155 552.0 360 75.0
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.5e-153 545.8 336 76.5
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 4.2e-153 545.0 301 86.0
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.7e-149 531.9 314 81.2
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 8.5e-146 520.8 305 81.6
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 3.7e-141 505.4 402 64.7
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.3e-138 496.9 352 67.9
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.2e-138 496.1 356 66.3
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 2.9e-138 495.7 357 67.8
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.7e-133 479.9 356 63.8
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 8.0e-128 461.1 363 65.8
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 3.2e-124 449.1 252 85.3
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 4.6e-123 445.3 360 64.2
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.3e-122 443.7 367 61.0
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 5.6e-121 438.3 241 86.7
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 2.9e-109 399.4 240 79.6
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.7e-104 382.1 210 85.7
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 9.6e-97 357.8 205 82.0
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.6e-70 270.0 180 72.2
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 8.7e-66 255.0 151 75.5
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 7.9e-59 231.9 153 71.2
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 4.3e-57 226.1 119 84.9
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-54 218.0 125 80.8
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.3e-48 198.0 322 37.9
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-42 177.9 207 49.3
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 2.5e-36 157.1 98 78.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-32 144.8 117 65.8
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 6.8e-26 122.5 59 91.5
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 2.9e-21 107.1 111 52.3
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.5e-17 94.7 79 64.6
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.9e-13 80.5 37 89.2
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 6.6e-13 79.3 162 36.4
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.1e-12 78.6 50 68.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.3e-08 65.1 249 26.1


User provided reference genes

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