Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.9e-299 1030.4 538 100.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.2e-262 908.7 523 92.4
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 8.5e-243 843.6 559 80.5
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 8.6e-235 817.0 567 76.9
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.2e-221 771.9 589 71.8
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 3.3e-202 708.8 561 69.3
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.5e-199 699.9 569 65.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 2.1e-193 679.5 573 64.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.9e-190 669.1 563 64.3
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.0e-187 659.1 575 63.0
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.1e-186 657.1 568 62.7
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.1e-186 657.1 534 66.1
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 3.3e-186 655.6 569 62.7
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 9.6e-186 654.1 573 62.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.3e-185 653.7 562 62.6
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.8e-184 649.8 563 63.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 6.9e-184 647.9 564 62.2
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.2e-183 647.1 567 62.6
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.0e-183 646.4 572 61.4
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.7e-182 643.3 570 60.7
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 3.8e-182 642.1 569 61.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 5.4e-181 638.3 590 58.6
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 9.3e-181 637.5 572 61.0
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 2.1e-180 636.3 565 62.7
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.6e-180 635.2 572 61.0
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 6.0e-180 634.8 568 61.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-179 633.3 568 61.3
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.8e-179 633.3 569 61.0
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.0e-179 632.5 578 60.2
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 3.9e-179 632.1 568 62.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 6.7e-179 631.3 569 61.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 8.7e-179 630.9 569 60.5
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.9e-178 629.8 571 60.4
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.3e-178 629.0 568 61.3
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.3e-178 629.0 568 60.9
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 7.4e-178 627.9 563 61.3
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 7.4e-178 627.9 570 60.2
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.6e-177 626.7 575 61.0
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.1e-177 626.3 568 61.1
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.1e-177 626.3 568 60.7
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.8e-177 625.9 572 60.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.2e-177 624.8 583 60.2
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 8.1e-177 624.4 572 60.5
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.1e-176 624.0 559 61.2
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.1e-176 624.0 568 60.2
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.8e-176 623.2 568 60.9
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 5.3e-176 621.7 572 60.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 9.0e-176 620.9 561 61.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.2e-175 620.5 570 60.2
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.5e-175 620.2 572 58.9
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 5.8e-175 618.2 572 59.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.3e-174 617.1 565 60.0
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.7e-174 616.7 581 59.9
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.2e-174 616.3 567 60.0
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.9e-174 615.9 566 59.7
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.9e-174 615.9 570 60.0
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-173 614.0 568 60.7
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.1e-173 614.0 572 59.4
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.9e-173 613.2 578 58.8
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.5e-173 612.8 570 59.1
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 4.2e-173 612.1 572 59.3
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 5.5e-173 611.7 572 60.5
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.5e-173 611.7 568 59.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 4.6e-172 608.6 568 59.9
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.0e-171 607.4 568 59.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.3e-171 607.1 569 58.7
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.8e-171 606.7 569 59.9
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.8e-171 606.7 569 59.9
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.3e-171 606.3 571 59.0
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 5.1e-171 605.1 566 60.1
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 8.7e-171 604.4 554 60.1
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 5.7e-170 601.7 569 57.8
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 7.4e-170 601.3 637 55.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 9.6e-170 600.9 577 57.2
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 3.7e-169 599.0 569 58.3
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.4e-168 597.0 576 59.0
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.4e-168 597.0 569 58.7
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 4.0e-168 595.5 568 59.9
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 4.5e-167 592.0 568 58.3
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.5e-162 576.2 571 57.1
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 7.7e-159 564.7 568 57.2
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 7.7e-159 564.7 568 57.2
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.2e-158 563.1 540 58.5
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.4e-157 560.5 568 56.9
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.4e-157 560.5 568 56.9
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 4.2e-157 558.9 568 56.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.2e-153 546.6 567 54.7
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.4e-152 543.1 575 52.9
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 4.1e-152 542.3 571 54.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.7e-150 537.0 569 54.1
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 6.5e-150 535.0 481 60.5
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.4e-147 527.3 567 53.3
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 6.5e-142 508.4 636 48.1
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.0e-139 501.1 525 55.0
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 3.5e-135 486.1 507 53.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.6e-116 424.1 451 55.0
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 5.2e-115 419.1 411 55.0
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 5.8e-106 389.0 578 40.5
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 9.5e-101 371.7 404 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.5e-98 364.4 564 40.1
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 2.4e-96 357.1 305 64.9
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.4e-88 331.3 305 62.0
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.9e-85 320.9 585 35.4
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.2e-84 318.2 563 36.8
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 5.4e-80 302.8 590 36.1
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.7e-73 281.2 227 66.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-70 270.8 225 63.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.1e-69 268.5 236 62.3
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 5.6e-61 239.6 372 44.9
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.9e-59 232.6 173 72.8
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 2.7e-55 220.7 236 52.1
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.9e-49 200.7 176 63.6
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.2e-47 195.3 174 56.9
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.0e-41 175.6 577 27.2
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.3e-36 158.7 156 61.5
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 7.2e-32 142.9 151 53.6
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.2e-24 116.3 66 77.3
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 2.6e-13 81.3 56 75.0
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 3.0e-06 57.8 41 65.9


User provided reference genes

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