Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.1e-118 429.1 221 100.0
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 9.3e-87 323.9 236 78.0
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.9e-72 275.8 271 60.9
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 4.5e-57 225.3 275 52.7
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.2e-55 219.2 263 52.1
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 9.4e-55 217.6 250 50.8
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.4e-55 217.6 248 51.2
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.2e-54 217.2 251 50.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.6e-54 215.7 251 50.6
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.8e-53 213.4 250 50.8
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 6.8e-53 211.5 221 56.6
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.2e-52 210.7 255 50.2
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 2.0e-52 209.9 253 49.8
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 7.5e-52 208.0 270 50.4
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 9.8e-52 207.6 269 49.8
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.3e-51 207.2 270 48.5
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.7e-51 206.8 269 49.4
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.1e-50 204.1 252 50.0
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 1.1e-50 204.1 257 48.6
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.8e-50 203.4 252 50.0
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 3.1e-50 202.6 258 48.8
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.1e-50 202.2 262 49.2
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 5.4e-50 201.8 248 49.6
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 2.7e-49 199.5 253 49.4
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 2.7e-49 199.5 269 48.0
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 3.5e-49 199.1 258 48.1
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.0e-48 197.6 252 47.6
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.0e-48 197.6 257 48.6
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.9e-48 196.1 250 48.8
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 3.8e-48 195.7 254 48.8
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 5.0e-48 195.3 252 48.0
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.0e-48 195.3 249 47.8
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 5.0e-48 195.3 261 46.7
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 6.5e-48 194.9 264 48.5
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 1.1e-47 194.1 253 49.0
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.1e-47 194.1 252 47.2
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.5e-47 193.7 269 47.6
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.5e-47 193.0 252 48.0
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 5.5e-47 191.8 255 49.0
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 5.5e-47 191.8 244 48.8
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.6e-46 190.3 267 44.6
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.6e-46 190.3 269 45.0
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 2.7e-46 189.5 261 47.1
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.7e-46 189.5 252 48.4
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 3.6e-46 189.1 256 47.7
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 3.6e-46 189.1 255 47.5
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 3.6e-46 189.1 271 47.6
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 4.7e-46 188.7 255 47.5
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 6.1e-46 188.3 252 46.0
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.0e-45 187.6 259 47.1
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 1.0e-45 187.6 256 47.3
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 1.0e-45 187.6 256 47.3
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.0e-45 187.6 257 44.7
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.0e-45 187.6 266 45.9
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.0e-45 187.6 268 44.4
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 2.3e-45 186.4 254 47.2
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 3.0e-45 186.0 268 44.4
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-45 185.7 263 46.8
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 4.0e-45 185.7 282 43.3
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 6.8e-45 184.9 272 46.0
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 8.8e-45 184.5 263 45.6
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 8.8e-45 184.5 253 47.0
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.2e-44 184.1 253 47.0
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.2e-44 184.1 252 46.8
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.2e-44 184.1 251 47.0
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.0e-44 183.3 257 44.4
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 4.4e-44 182.2 260 46.9
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 9.8e-44 181.0 222 51.4
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.7e-43 180.3 245 48.2
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 1.7e-43 180.3 251 46.2
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 8.3e-43 177.9 252 44.0
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.1e-42 177.6 261 44.4
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 2.4e-42 176.4 226 50.0
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 5.4e-42 175.3 252 46.8
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.2e-41 174.1 247 46.2
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.0e-41 173.3 223 50.2
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 5.9e-41 171.8 254 44.9
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 3.8e-40 169.1 246 45.5
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.1e-39 167.5 263 42.6
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.3e-39 166.0 209 48.3
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 3.3e-39 166.0 179 57.5
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 5.6e-39 165.2 247 44.1
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.8e-38 162.9 266 44.0
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.8e-38 162.9 252 44.4
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 3.6e-38 162.5 268 41.4
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 5.2e-37 158.7 222 46.4
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 8.9e-37 157.9 250 43.6
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 2.9e-35 152.9 255 42.7
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 2.9e-35 152.9 248 42.3
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 4.9e-35 152.1 222 47.7
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 4.9e-35 152.1 232 45.7
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 8.3e-35 151.4 163 55.8
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-34 150.6 221 46.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.8e-34 150.2 164 54.9
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.8e-34 150.2 244 41.8
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 2.0e-33 146.7 157 55.4
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 6.6e-32 141.7 205 41.5
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 6.8e-29 131.7 164 48.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.2e-27 126.7 248 36.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 2.9e-27 126.3 260 35.8
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.9e-27 125.6 153 48.4
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 1.3e-24 117.5 259 34.0
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 5.0e-24 115.5 249 36.1
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 8.6e-24 114.8 133 54.1
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.1e-22 110.2 151 43.7
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-21 107.8 161 42.2
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 3.4e-20 102.8 276 33.0
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.9e-19 99.8 170 40.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-15 86.7 91 54.9
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-15 86.7 91 54.9
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 7.3e-15 85.1 249 31.3
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 3.6e-14 82.8 163 38.7
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 6.2e-14 82.0 198 36.4
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 8.4e-11 71.6 171 32.2
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 4.1e-10 69.3 88 54.5
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 7.1e-10 68.6 43 69.8
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.3e-08 64.3 57 56.1
AUR62032381 Chenopodium quinoa HOM05D004036 ORTHO05D004576 8.6e-08 61.6 32 90.6
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.2e-06 57.8 160 30.6


User provided reference genes

Program Settings