Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.6e-161 571.6 306 100.0
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.2e-138 495.4 315 86.7
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 1.7e-126 456.4 344 72.1
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.4e-109 400.2 343 69.1
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 8.9e-96 354.4 350 61.4
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 4.9e-94 348.6 351 58.1
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 3.5e-92 342.4 356 56.7
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 4.6e-92 342.0 354 56.8
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 1.0e-91 340.9 348 57.2
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.1e-90 337.4 220 79.1
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.9e-90 336.7 334 57.8
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 2.5e-90 336.3 358 55.9
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 7.3e-90 334.7 356 56.5
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.6e-89 333.6 360 57.2
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 4.7e-89 332.0 344 57.8
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 4.7e-89 332.0 350 58.9
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 4.7e-89 332.0 346 58.7
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 8.1e-89 331.3 307 62.2
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 1.8e-88 330.1 354 54.5
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.4e-88 329.7 359 55.4
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 4.0e-88 328.9 355 55.2
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 6.9e-88 328.2 195 84.1
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 1.2e-87 327.4 352 59.4
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.5e-87 327.0 333 59.5
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 1.5e-87 327.0 195 84.1
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 4.4e-87 325.5 354 54.0
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 4.4e-87 325.5 354 54.0
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 4.4e-87 325.5 351 55.3
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 9.9e-87 324.3 358 53.6
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 9.9e-87 324.3 358 53.6
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 9.9e-87 324.3 360 54.4
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 1.3e-86 323.9 359 59.6
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.7e-86 323.6 195 83.6
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 3.8e-86 322.4 361 56.0
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 4.9e-86 322.0 356 52.8
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 4.9e-86 322.0 342 56.1
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 4.9e-86 322.0 359 54.9
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.1e-85 320.9 342 55.8
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 1.4e-85 320.5 351 53.3
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 4.2e-85 318.9 194 83.0
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 7.1e-85 318.2 353 51.8
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 2.1e-84 316.6 209 77.5
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 2.7e-84 316.2 352 56.0
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 7.8e-84 314.7 209 76.6
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 1.0e-83 314.3 196 80.1
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 6.6e-83 311.6 353 56.1
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 2.5e-82 309.7 346 54.9
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 2.5e-82 309.7 196 77.6
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 7.3e-82 308.1 218 72.0
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 9.6e-82 307.8 352 57.4
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 1.3e-81 307.4 354 55.1
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.6e-81 307.0 337 55.5
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 2.8e-81 306.2 352 56.2
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 2.8e-81 306.2 356 53.1
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 8.1e-81 304.7 195 77.4
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 8.1e-81 304.7 193 76.7
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.1e-80 304.3 204 74.0
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 1.1e-80 304.3 352 55.1
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.1e-80 304.3 208 74.0
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.4e-80 303.9 193 78.2
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 2.4e-80 303.1 200 76.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 3.1e-80 302.8 204 73.5
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 9.0e-80 301.2 202 73.3
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.2e-79 300.8 362 52.2
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.6e-79 299.7 208 72.6
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.5e-79 298.9 208 72.1
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.5e-79 298.9 358 52.0
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 4.5e-79 298.9 213 72.3
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 5.8e-79 298.5 214 72.9
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 9.9e-79 297.7 193 76.7
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.3e-78 297.4 352 53.1
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.3e-78 297.4 375 51.5
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.7e-78 297.0 208 71.6
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.7e-78 297.0 208 71.6
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 2.9e-78 296.2 344 52.6
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 2.9e-78 296.2 345 53.0
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 4.9e-78 295.4 197 74.1
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.4e-77 293.9 217 70.0
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.9e-77 293.5 213 70.9
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 1.9e-77 293.5 357 50.7
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 5.4e-77 292.0 368 49.7
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 7.1e-77 291.6 363 50.4
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.2e-76 290.8 327 52.0
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 6.0e-76 288.5 352 53.7
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.8e-75 287.0 367 49.9
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 3.0e-75 286.2 355 49.0
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 6.7e-75 285.0 354 49.7
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 1.1e-74 284.3 324 53.4
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.5e-74 283.1 192 71.4
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 2.5e-74 283.1 407 48.4
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 1.3e-73 280.8 348 51.4
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 4.2e-69 265.8 380 47.4
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 7.1e-69 265.0 213 65.7
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 2.1e-68 263.5 287 62.0
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 3.9e-67 259.2 278 60.4
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.3e-65 254.2 168 75.6
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 1.3e-65 254.2 198 65.2
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 4.0e-64 249.2 263 57.8
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 1.0e-62 244.6 212 61.3
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 2.2e-62 243.4 291 50.2
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 2.2e-62 243.4 235 60.4
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 9.3e-61 238.0 278 56.5
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 2.5e-58 229.9 199 61.8
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 8.2e-57 224.9 125 91.2
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.3e-54 217.6 190 60.5
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.1e-53 214.5 202 53.0
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 1.7e-49 200.7 215 48.8
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.2e-47 194.5 172 52.9
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 1.3e-46 191.0 248 44.0
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.8e-43 180.6 192 45.3
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 6.5e-22 109.0 82 59.8
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 1.5e-21 107.8 220 32.3
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 2.7e-20 103.6 138 40.6
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 8.3e-17 92.0 61 80.3
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 5.4e-16 89.4 148 35.1
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 5.0e-14 82.8 204 28.9
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 9.5e-13 78.6 52 80.8
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 3.6e-12 76.6 72 52.8
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.8e-11 72.4 44 70.5
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 3.9e-06 56.6 97 38.1


User provided reference genes

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