Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024279 Chenopodium quinoa HOM05D009145 ORTHO05D000140 1.8e-123 446.0 239 100.0
AUR62028861 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.2e-72 274.2 148 95.3
AUR62025826 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.1e-69 267.3 149 91.9
AUR62031358 Chenopodium quinoa HOM05D009145 ORTHO05D000140 2.5e-69 266.2 140 96.4
AUR62008634 Chenopodium quinoa HOM05D009145 ORTHO05D000140 1.4e-59 233.8 151 80.8
EL10Ac4g08060 Beta vulgaris HOM05D009145 ORTHO05D000140 1.5e-50 203.8 145 70.3
EL10Ac1g02133 Beta vulgaris HOM05D009145 ORTHO05D000140 4.4e-50 202.2 147 70.1
EL10Ac9g20779 Beta vulgaris HOM05D009145 ORTHO05D000140 7.6e-50 201.4 146 70.5
EL10Ac4g08803 Beta vulgaris HOM05D009145 ORTHO05D000140 9.9e-50 201.1 146 70.5
AUR62015057 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.1e-44 183.3 133 71.4
AUR62033616 Chenopodium quinoa HOM05D009145 ORTHO05D000140 3.6e-44 182.6 150 64.7
AUR62038998 Chenopodium quinoa HOM05D009145 ORTHO05D000140 6.4e-41 171.8 139 65.5
EL10Ac6g14168 Beta vulgaris HOM05D009145 ORTHO05D000140 2.7e-39 166.4 149 57.0
EL10As1g23106 Beta vulgaris HOM05D000034 ORTHO05D000037 4.6e-39 165.6 155 54.8
AUR62037408 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.1e-38 162.2 136 64.7
EL10Ac2g04238 Beta vulgaris HOM05D009145 ORTHO05D000140 8.7e-38 161.4 123 69.9
AUR62042239 Chenopodium quinoa HOM05D009145 ORTHO05D024976 3.6e-36 156.0 107 78.5
EL10Ac8g18839 Beta vulgaris HOM05D002420 ORTHO05D002422 4.0e-35 152.5 141 57.4
EL10Ac6g14410 Beta vulgaris HOM05D009145 ORTHO05D000140 2.6e-34 149.8 115 67.8
EL10As10g23957 Beta vulgaris HOM05D009145 ORTHO05D000140 4.2e-32 142.5 149 51.7
EL10Ac5g11631 Beta vulgaris HOM05D009145 ORTHO05D000140 3.5e-31 139.4 109 69.7
AUR62023567 Chenopodium quinoa HOM05D000012 ORTHO05D000540 2.6e-26 123.2 96 66.7
AUR62034505 Chenopodium quinoa HOM05D009145 ORTHO05D000140 1.4e-24 117.5 92 63.0
AUR62027532 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.6e-23 114.0 74 79.7
COL.COLO4_20623 Corchorus olitorius HOM05D009145 ORTHO05D000140 2.0e-18 97.1 154 38.3
RcHm_v2.0_Chr5g0053961 Rosa chinensis HOM05D009145 ORTHO05D000140 4.9e-17 92.4 153 37.3
RcHm_v2.0_Chr7g0231381 Rosa chinensis HOM05D000665 ORTHO05D000140 4.9e-17 92.4 154 37.0
Migut.E01617 Erythranthe guttata HOM05D009145 ORTHO05D000140 5.5e-16 89.0 145 37.2
COL.COLO4_34387 Corchorus olitorius HOM05D009145 ORTHO05D000140 2.4e-11 73.6 144 31.2
FvH4_6g32032 Fragaria vesca HOM05D000665 ORTHO05D000140 3.1e-11 73.2 85 43.5
FAN14G0837 Fragaria x ananassa HOM05D009145 ORTHO05D000140 3.1e-11 73.2 85 43.5
RcHm_v2.0_Chr4g0405761 Rosa chinensis HOM05D000665 ORTHO05D000140 3.1e-11 73.2 130 36.2
SGA_v2.0_scaffold134G34689 Striga asiatica HOM05D009145 ORTHO05D000140 3.1e-11 73.2 141 31.2
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 4.1e-11 72.8 65 60.0
AUR62009531 Chenopodium quinoa HOM05D009145 ORTHO05D000140 9.0e-11 71.6 86 50.0
AUR62038606 Chenopodium quinoa HOM05D009145 ORTHO05D000140 1.5e-10 70.9 57 64.9
EL10As6g23681 Beta vulgaris HOM05D009145 ORTHO05D000140 2.6e-10 70.1 43 69.8
EL10Ac1g02152 Beta vulgaris HOM05D000034 ORTHO05D000037 1.3e-09 67.8 48 75.0
SGA_v2.0_scaffold17G08136 Striga asiatica HOM05D009145 ORTHO05D000140 1.7e-09 67.4 136 31.6
COL.COLO4_38347 Corchorus olitorius HOM05D009145 ORTHO05D000140 2.2e-09 67.0 116 34.5
EL10Ac6g14236 Beta vulgaris HOM05D007922 ORTHO05D009490 1.4e-08 64.3 56 60.7
MD07G1064000 Malus domestica HOM05D009249 ORTHO05D002074 5.5e-08 62.4 99 34.3
FAN09G3992 Fragaria x ananassa HOM05D000665 ORTHO05D000140 1.2e-07 61.2 187 27.3
RcHm_v2.0_Chr4g0417571 Rosa chinensis HOM05D009145 ORTHO05D000140 1.2e-07 61.2 144 31.2
TAR374G0892 Trochodendron aralioides HOM05D056309 ORTHO05D000140 1.2e-07 61.2 66 42.4
COL.COLO4_23750 Corchorus olitorius HOM05D009145 ORTHO05D029124 1.6e-07 60.8 119 37.0
Dinv13787 Davidia involucrata HOM05D000034 ORTHO05D000037 4.6e-07 59.3 172 30.2
COL.COLO4_07541 Corchorus olitorius HOM05D000665 ORTHO05D000140 6.1e-07 58.9 182 29.1
Lj5C596T3 Lonicera japonica HOM05D000034 ORTHO05D000037 6.1e-07 58.9 177 26.0
Migut.C00054 Erythranthe guttata HOM05D000665 ORTHO05D000140 3.0e-06 56.6 131 29.8
COL.COLO4_20932 Corchorus olitorius HOM05D009145 ORTHO05D000140 5.1e-06 55.8 109 38.5


User provided reference genes

Program Settings