Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 7.5e-228 793.5 399 100.0
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.2e-190 667.5 339 98.5
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.8e-184 649.4 406 81.8
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.3e-182 643.3 404 80.4
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 5.8e-172 607.8 379 80.5
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.7e-169 599.0 397 76.6
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.8e-168 596.3 395 76.5
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.5e-167 593.2 390 76.7
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 2.5e-167 592.4 384 76.6
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 5.7e-167 591.3 387 76.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.7e-166 588.6 390 75.1
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 8.2e-166 587.4 387 75.7
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 8.2e-166 587.4 388 76.5
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 8.2e-166 587.4 380 76.1
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 1.8e-165 586.3 363 79.1
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 2.4e-165 585.9 386 76.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.5e-164 583.2 402 72.9
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.5e-164 583.2 386 75.6
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.6e-164 582.4 400 72.2
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.3e-163 580.1 376 76.3
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 3.8e-163 578.6 388 74.5
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 8.5e-163 577.4 385 75.3
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 8.5e-163 577.4 387 74.9
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.5e-163 577.4 368 78.5
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.1e-162 577.0 391 72.9
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.4e-162 576.6 412 69.9
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.2e-162 575.5 398 73.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.2e-162 575.5 336 83.0
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 3.2e-162 575.5 381 75.6
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 4.2e-162 575.1 381 75.6
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 4.2e-162 575.1 412 71.8
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 5.5e-162 574.7 392 73.7
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 9.4e-162 573.9 337 82.5
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 2.1e-161 572.8 367 77.4
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 3.6e-161 572.0 371 75.2
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 6.1e-161 571.2 379 75.7
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.1e-161 571.2 394 73.6
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.0e-160 570.5 385 75.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.3e-160 569.3 393 73.5
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.0e-160 568.9 367 76.6
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 3.9e-160 568.5 384 72.1
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 5.1e-160 568.2 385 73.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 5.1e-160 568.2 348 80.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 6.7e-160 567.8 388 74.5
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 6.7e-160 567.8 397 71.8
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 8.8e-160 567.4 392 72.4
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.1e-159 567.0 386 73.3
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.5e-159 566.6 362 77.1
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 2.0e-159 566.2 375 74.1
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 4.3e-159 565.1 330 82.7
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 5.7e-159 564.7 346 77.2
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 5.7e-159 564.7 373 74.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 5.7e-159 564.7 395 72.7
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 7.4e-159 564.3 388 73.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 7.4e-159 564.3 392 73.5
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.7e-158 563.1 391 72.1
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 2.8e-158 562.4 334 82.0
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.8e-158 562.4 392 73.5
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 2.8e-158 562.4 386 73.8
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.8e-158 562.4 395 71.9
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.7e-158 562.0 370 74.6
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 4.8e-158 561.6 396 71.5
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.1e-157 560.5 382 71.5
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.4e-157 560.1 370 74.3
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.4e-157 559.3 375 73.1
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 2.4e-157 559.3 375 72.8
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 4.1e-157 558.5 339 79.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.1e-157 558.5 339 79.4
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 6.9e-157 557.8 392 73.7
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.5e-156 556.6 395 72.7
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.6e-156 555.8 379 71.8
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 3.4e-156 555.4 367 75.7
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 4.5e-156 555.1 364 73.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 5.9e-156 554.7 344 77.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 7.7e-156 554.3 388 72.4
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.0e-155 553.9 380 72.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.7e-155 553.1 399 72.2
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.7e-155 553.1 384 72.4
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.2e-155 552.7 350 75.7
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.2e-155 552.7 350 75.7
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.0e-155 551.6 350 75.1
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.0e-155 551.6 350 75.1
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.0e-155 551.6 350 74.9
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 8.5e-155 550.8 371 72.5
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 8.5e-155 550.8 369 71.3
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 9.4e-154 547.4 379 70.7
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.1e-153 546.2 443 64.6
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 5.1e-152 541.6 329 77.5
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 6.7e-152 541.2 417 68.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 7.4e-151 537.7 376 71.8
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.7e-150 536.6 374 69.8
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.4e-149 533.5 426 63.4
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.4e-149 533.5 333 75.7
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 9.1e-149 530.8 385 68.1
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 7.2e-146 521.2 299 84.6
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 7.2e-146 521.2 362 73.5
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-143 513.8 370 71.1
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 7.7e-140 501.1 368 69.8
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.0e-139 500.7 380 70.3
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.0e-139 498.4 427 64.2
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 3.6e-137 492.3 333 70.6
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 5.2e-136 488.4 320 76.9
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 3.4e-135 485.7 358 66.8
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.2e-132 477.2 306 75.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.2e-129 467.2 323 68.7
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 6.1e-129 464.9 369 63.1
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 7.7e-124 448.0 308 74.4
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.9e-123 446.0 349 62.2
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.6e-113 413.7 332 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 4.0e-112 409.1 279 71.3
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 2.0e-108 396.7 271 73.8
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 4.3e-90 335.9 288 58.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 5.2e-88 328.9 291 56.0
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.2e-84 317.8 345 46.7
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 5.3e-80 302.4 304 56.6
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.0e-75 288.1 185 74.6
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 3.0e-67 260.0 194 72.2
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.6e-63 245.4 186 69.4
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.4e-50 202.2 130 69.2
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.4e-40 171.4 113 73.5
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.3e-33 148.3 102 68.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.7e-28 130.6 133 51.1
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 4.5e-23 113.2 127 52.0
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 7.2e-21 105.9 201 34.8
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.2e-21 105.9 95 61.1
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.0e-19 100.1 106 50.0
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 8.3e-17 92.4 60 73.3


User provided reference genes

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