Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 8.7e-63 243.4 120 100.0
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.2e-50 202.2 173 64.7
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 5.9e-43 177.6 141 65.2
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.8e-36 156.0 138 58.7
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 2.6e-30 135.6 130 53.8
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 5.9e-27 124.4 144 49.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 4.2e-25 118.2 148 46.6
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 1.6e-24 116.3 142 43.7
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 2.7e-24 115.5 143 44.1
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 3.6e-24 115.2 142 47.9
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 3.6e-24 115.2 141 47.5
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 3.6e-24 115.2 111 55.0
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 4.7e-24 114.8 143 45.5
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 6.1e-24 114.4 141 45.4
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 8.0e-24 114.0 138 46.4
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 8.0e-24 114.0 148 45.3
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 8.0e-24 114.0 121 51.2
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 1.0e-23 113.6 128 48.4
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 1.0e-23 113.6 127 50.4
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.4e-23 113.2 124 48.4
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 1.4e-23 113.2 141 45.4
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.8e-23 112.8 141 42.6
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 1.8e-23 112.8 132 47.0
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 1.8e-23 112.8 140 45.0
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 1.8e-23 112.8 117 50.4
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 1.8e-23 112.8 116 48.3
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 2.3e-23 112.5 148 47.3
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 3.0e-23 112.1 149 45.6
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 6.7e-23 110.9 117 47.9
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 8.8e-23 110.5 130 47.7
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 8.8e-23 110.5 130 47.7
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 2.0e-22 109.4 132 47.0
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 2.0e-22 109.4 141 46.8
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 2.6e-22 109.0 132 47.0
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 2.6e-22 109.0 139 47.5
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 2.6e-22 109.0 145 44.1
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 5.7e-22 107.8 144 45.1
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.7e-21 106.3 136 43.4
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 1.7e-21 106.3 135 45.2
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 2.2e-21 105.9 151 39.1
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 2.8e-21 105.5 127 47.2
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 2.8e-21 105.5 114 48.2
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 3.7e-21 105.1 149 43.6
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 4.8e-21 104.8 117 47.0
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 4.8e-21 104.8 136 44.1
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 8.3e-21 104.0 129 46.5
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 1.1e-20 103.6 127 49.6
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.4e-20 103.2 118 44.9
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 1.4e-20 103.2 139 42.4
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 1.8e-20 102.8 143 41.3
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 2.4e-20 102.4 124 41.9
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 3.1e-20 102.1 132 42.4
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 3.1e-20 102.1 142 40.8
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 5.3e-20 101.3 127 48.8
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 5.3e-20 101.3 135 43.0
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 7.0e-20 100.9 129 43.4
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 9.1e-20 100.5 121 43.8
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 1.2e-19 100.1 138 42.0
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 2.0e-19 99.4 136 45.6
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-19 99.4 117 45.3
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 2.7e-19 99.0 144 40.3
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.7e-19 99.0 101 52.5
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 4.5e-19 98.2 141 39.0
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 5.9e-19 97.8 145 39.3
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 5.9e-19 97.8 133 41.4
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 7.7e-19 97.4 121 46.3
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.0e-18 97.1 127 44.9
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 1.3e-18 96.7 131 40.5
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 1.7e-18 96.3 141 39.7
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 1.7e-18 96.3 121 46.3
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 2.9e-18 95.5 129 41.9
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 8.5e-18 94.0 142 39.4
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.1e-17 93.6 129 41.1
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.5e-17 93.2 101 47.5
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 1.9e-17 92.8 130 43.1
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 5.5e-17 91.3 141 40.4
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 7.2e-17 90.9 164 36.0
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 2.7e-16 89.0 78 55.1
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 2.7e-16 89.0 78 55.1
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 2.7e-16 89.0 83 54.2
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 3.6e-16 88.6 125 40.0
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 4.7e-16 88.2 138 39.1
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 4.7e-16 88.2 138 39.1
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 6.1e-16 87.8 143 39.2
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 6.1e-16 87.8 87 54.0
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 8.0e-16 87.4 127 39.4
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 1.4e-15 86.7 117 40.2
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.4e-15 86.7 117 40.2
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.2e-14 83.6 79 51.9
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 2.6e-14 82.4 79 50.6
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 9.8e-14 80.5 118 43.2
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 1.7e-13 79.7 99 46.5
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 3.7e-13 78.6 113 41.6
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 1.4e-12 76.6 56 60.7
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 2.4e-12 75.9 83 51.8
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 5.4e-12 74.7 82 41.5
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 2.7e-11 72.4 120 31.7
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 1.7e-10 69.7 52 59.6
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.3e-10 69.3 76 48.7
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 2.9e-10 68.9 79 48.1
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 5.0e-10 68.2 56 60.7
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 1.1e-09 67.0 117 34.2
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 3.3e-09 65.5 105 31.4
EL10Ac1g02037 Beta vulgaris HOM05D010653 ORTHO05D013151 1.2e-08 63.5 34 85.3
EL10Ac2g03343 Beta vulgaris HOM05D010653 ORTHO05D008223 3.6e-08 62.0 34 82.4
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 8.0e-08 60.8 65 50.8


User provided reference genes

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