Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 9.6e-181 636.7 327 100.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.8e-142 509.6 310 86.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 8.8e-134 480.7 306 78.8
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 4.5e-130 468.4 339 74.0
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 5.9e-122 441.4 303 75.2
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 3.6e-103 379.0 291 68.7
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.4e-102 377.1 265 69.1
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 1.3e-100 370.5 306 62.4
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.2e-100 369.8 266 69.5
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.1e-99 367.5 271 68.3
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 1.9e-99 366.7 263 69.6
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 4.1e-99 365.5 261 69.3
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 5.4e-99 365.2 261 69.0
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.6e-98 363.6 248 73.4
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.0e-98 361.7 240 72.9
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.3e-97 360.5 261 69.0
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.3e-97 360.5 261 68.6
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 3.0e-97 359.4 261 67.4
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 3.9e-97 359.0 263 67.7
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 3.9e-97 359.0 259 68.3
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.9e-96 356.7 305 61.0
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.9e-96 356.7 288 63.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 2.5e-96 356.3 256 68.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.5e-96 356.3 278 65.5
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 3.3e-96 355.9 292 62.7
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 4.3e-96 355.5 243 70.4
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 5.6e-96 355.1 311 61.4
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 5.6e-96 355.1 266 67.3
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 2.8e-95 352.8 299 62.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.8e-95 352.8 243 70.0
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 2.8e-95 352.8 263 66.2
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 3.6e-95 352.4 240 70.4
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.7e-95 352.1 296 61.5
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.2e-95 351.7 259 66.0
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 6.2e-95 351.7 259 66.0
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.1e-94 350.9 261 67.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.8e-94 350.1 243 69.5
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.4e-94 349.7 304 60.2
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.2e-93 347.4 259 65.3
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.2e-93 347.4 270 65.9
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.2e-93 347.4 263 68.8
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.6e-93 346.3 318 59.4
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 2.6e-93 346.3 297 61.6
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 4.4e-93 345.5 303 60.1
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.9e-92 342.0 275 63.6
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.9e-91 340.1 308 58.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 5.4e-91 338.6 321 56.1
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 9.3e-91 337.8 256 66.4
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.6e-90 337.0 330 56.1
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 2.1e-90 336.7 262 64.9
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.0e-89 334.3 221 75.1
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 8.7e-89 331.3 261 64.0
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.1e-88 330.9 232 67.7
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.9e-88 330.1 241 67.6
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 2.5e-88 329.7 254 65.7
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 3.3e-88 329.3 244 65.6
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 4.3e-88 328.9 292 59.2
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 3.6e-87 325.9 308 57.5
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 6.2e-87 325.1 236 67.4
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 8.1e-87 324.7 235 68.9
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 1.1e-86 324.3 275 63.3
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 1.1e-86 324.3 287 59.9
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 3.1e-86 322.8 265 63.0
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 6.9e-86 321.6 314 56.1
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 6.9e-86 321.6 221 71.5
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 9.0e-86 321.2 263 62.7
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 2.0e-85 320.1 257 63.0
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 3.4e-85 319.3 305 56.1
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 5.8e-85 318.5 246 64.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 9.9e-85 317.8 244 67.2
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.3e-84 317.4 273 61.2
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.7e-84 317.0 293 57.0
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.7e-84 317.0 244 67.2
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 3.8e-84 315.8 293 57.7
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 3.8e-84 315.8 220 70.9
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 3.8e-84 315.8 220 70.9
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 3.8e-84 315.8 283 59.4
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 3.8e-84 315.8 278 60.1
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 3.8e-84 315.8 267 61.4
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 8.4e-84 314.7 288 58.3
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.4e-83 313.9 251 62.2
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.9e-83 313.5 258 60.9
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 2.4e-83 313.2 260 60.0
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 7.1e-83 311.6 274 60.9
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 7.1e-83 311.6 291 58.1
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 7.1e-83 311.6 291 58.1
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.6e-82 310.5 248 64.9
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.1e-82 310.1 241 65.6
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.1e-82 310.1 278 59.4
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.6e-82 308.9 275 57.5
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 7.8e-82 308.1 298 52.7
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.7e-81 307.0 292 57.9
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.7e-81 307.0 275 57.5
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.3e-80 301.6 275 56.4
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.8e-79 299.7 226 65.0
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 2.8e-79 299.7 255 58.8
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 6.2e-79 298.5 236 65.3
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.4e-78 297.4 290 54.1
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 3.1e-78 296.2 182 78.6
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.7e-76 290.4 256 58.6
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 3.8e-76 289.3 222 63.1
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.4e-75 286.6 192 71.4
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.5e-72 277.3 200 70.0
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 6.2e-71 271.9 203 66.5
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.1e-70 271.2 287 51.2
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 7.6e-69 265.0 291 51.2
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 6.0e-66 255.4 261 51.7
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.4e-62 244.2 283 46.6
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 1.2e-61 241.1 263 48.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.0e-60 238.0 263 48.7
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 2.2e-60 236.9 148 78.4
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 4.5e-53 212.6 274 47.4
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 4.2e-51 206.1 232 48.3
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-50 203.8 121 79.3
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 4.6e-50 202.6 173 57.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 6.7e-49 198.7 185 56.2
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 5.7e-48 195.7 103 88.3
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.7e-47 194.1 244 44.7
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 2.0e-29 134.0 69 87.0
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.9e-28 130.2 79 73.4
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 2.5e-19 100.5 192 37.5
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 2.3e-12 77.4 61 59.0
EL10Ac5g10765 Beta vulgaris HOM05D001787 ORTHO05D088741 6.1e-10 69.3 58 60.3
EL10Ac7g16970 Beta vulgaris HOM05D000810 ORTHO05D014916 2.3e-09 67.4 59 55.9
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 2.6e-08 63.9 43 69.8
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 7.5e-08 62.4 137 29.2


User provided reference genes

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