Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024063 Chenopodium quinoa HOM05D004288 ORTHO05D004997 2.0e-34 148.7 83 100.0
AUR62041736 Chenopodium quinoa HOM05D004288 ORTHO05D004997 2.2e-25 118.6 62 88.7
AUR62041737 Chenopodium quinoa HOM05D004288 ORTHO05D004997 8.5e-17 90.1 71 66.2
AUR62029595 Chenopodium quinoa HOM05D004288 ORTHO05D004997 1.5e-16 89.4 70 67.1
AUR62024064 Chenopodium quinoa HOM05D004288 ORTHO05D004997 1.6e-15 85.9 61 70.5
AUR62029596 Chenopodium quinoa HOM05D004288 ORTHO05D004997 2.1e-15 85.5 47 83.0
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 5.4e-11 70.9 66 59.1
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 2.2e-09 65.5 66 56.1
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 2.9e-09 65.1 56 58.9
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 3.8e-09 64.7 61 55.7
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 1.9e-08 62.4 66 53.0
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 2.5e-08 62.0 65 49.2
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 2.5e-08 62.0 65 50.8
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 3.2e-08 61.6 63 54.0
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 3.2e-08 61.6 67 55.2
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 4.2e-08 61.2 64 53.1
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 4.2e-08 61.2 71 42.3
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 5.5e-08 60.8 63 54.0
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 7.2e-08 60.5 68 54.4
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 7.2e-08 60.5 70 48.6
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 1.2e-07 59.7 69 52.2
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.2e-07 59.7 66 53.0
PGR031G3267 Punica granatum HOM05D004288 ORTHO05D004997 1.6e-07 59.3 62 46.8
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.1e-07 58.9 60 51.7
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 2.1e-07 58.9 59 57.6
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 2.7e-07 58.5 68 44.1
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 3.6e-07 58.2 65 49.2
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 3.6e-07 58.2 62 54.8
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 4.7e-07 57.8 66 50.0
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 4.7e-07 57.8 57 56.1
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 4.7e-07 57.8 62 50.0
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 6.1e-07 57.4 68 52.9
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 6.1e-07 57.4 65 53.8
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 6.1e-07 57.4 63 52.4
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 8.0e-07 57.0 68 51.5
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 8.0e-07 57.0 68 47.1
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 8.0e-07 57.0 60 55.0
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 8.0e-07 57.0 61 54.1
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 8.0e-07 57.0 59 57.6
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 1.0e-06 56.6 59 54.2
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.0e-06 56.6 69 50.7
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 1.0e-06 56.6 43 60.5
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 1.0e-06 56.6 64 51.6
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.4e-06 56.2 68 50.0
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.4e-06 56.2 67 46.3
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 1.4e-06 56.2 60 48.3
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 1.8e-06 55.8 68 50.0
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 1.8e-06 55.8 59 52.5
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 2.3e-06 55.5 59 54.2
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 2.3e-06 55.5 68 47.1
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 3.0e-06 55.1 63 49.2
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 3.0e-06 55.1 40 65.0
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 3.0e-06 55.1 70 48.6
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 4.0e-06 54.7 69 49.3
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 4.0e-06 54.7 57 50.9
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 4.0e-06 54.7 75 44.0
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 5.2e-06 54.3 64 50.0
Lj1g0008863 Lotus japonicus HOM05D004288 ORTHO05D004997 5.2e-06 54.3 70 44.3
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 5.2e-06 54.3 64 46.9
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 5.2e-06 54.3 68 47.1
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 6.8e-06 53.9 61 52.5
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 6.8e-06 53.9 64 50.0
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 6.8e-06 53.9 58 53.4
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 6.8e-06 53.9 69 43.5
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 8.8e-06 53.5 68 50.0
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 8.8e-06 53.5 65 46.2


User provided reference genes

Program Settings