Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024025 Chenopodium quinoa HOM05D008748 ORTHO05D000649 1.1e-95 353.2 170 100.0
AUR62041317 Chenopodium quinoa HOM05D008748 ORTHO05D000649 2.6e-84 315.5 153 98.7
Ah.01g015980 Amaranthus hybridus HOM05D008748 ORTHO05D000649 1.0e-61 240.4 156 70.5
AUR62024023 Chenopodium quinoa HOM05D008748 ORTHO05D000649 1.9e-39 166.4 156 51.9
AUR62041315 Chenopodium quinoa HOM05D008748 ORTHO05D000649 1.2e-38 163.7 156 51.9
Ah.01g015970 Amaranthus hybridus HOM05D008748 ORTHO05D000649 1.9e-34 149.8 156 46.8
Sc12g0003700 Simmondsia chinensis HOM05D000733 ORTHO05D000649 2.2e-19 99.8 152 35.5
Sc06g0006120 Simmondsia chinensis HOM05D008748 ORTHO05D000649 3.8e-19 99.0 151 36.4
HanXRQChr13g0403571 Helianthus annuus HOM05D000733 ORTHO05D000649 9.3e-18 94.4 153 30.7
TPR.G19617 Trifolium pratense HOM05D000980 ORTHO05D000649 9.3e-18 94.4 152 34.2
Nn6g35187 Nelumbo nucifera HOM05D000733 ORTHO05D000649 1.2e-17 94.0 151 33.1
Lsat_1_v5_gn_6_41740 Lactuca sativa HOM05D000733 ORTHO05D000649 2.1e-17 93.2 153 30.7
TAR633G1866 Trochodendron aralioides HOM05D000733 ORTHO05D000649 2.1e-17 93.2 148 33.1
Ciclev10029305m.g Citrus clementina HOM05D000733 ORTHO05D000649 4.6e-17 92.0 154 29.2
Ca_00222_v3 Cicer arietinum L. HOM05D001102 ORTHO05D001018 1.0e-16 90.9 152 31.6
TAR369G0482 Trochodendron aralioides HOM05D000980 ORTHO05D000649 1.3e-16 90.5 154 33.1
Rhsim13G0101800 Rhododendron simsii HOM05D000733 ORTHO05D000649 2.3e-16 89.7 153 33.3
Sc21g0004210 Simmondsia chinensis HOM05D000733 ORTHO05D000649 2.3e-16 89.7 151 33.1
AUR62041321 Chenopodium quinoa HOM05D000980 ORTHO05D000649 3.0e-16 89.4 151 32.5
Lj6g0019562 Lotus japonicus HOM05D000733 ORTHO05D000649 6.6e-16 88.2 152 31.6
Rhsim01G0210100 Rhododendron simsii HOM05D000980 ORTHO05D000649 6.6e-16 88.2 151 32.5
Atru.chr3.3498 Acer truncatum HOM05D000980 ORTHO05D000649 1.5e-15 87.0 152 29.6
EL10Ac9g21008 Beta vulgaris HOM05D000980 ORTHO05D000649 1.5e-15 87.0 152 32.9
AUR62024021 Chenopodium quinoa HOM05D000980 ORTHO05D000649 1.9e-15 86.7 151 32.5
Hma1.2p1_0051F.1_g029590 Hydrangea macrophylla HOM05D000733 ORTHO05D000649 2.5e-15 86.3 152 30.3
Nn2g13881 Nelumbo nucifera HOM05D000733 ORTHO05D000649 3.3e-15 85.9 153 32.0
Phvul.006G194400 Phaseolus vulgaris HOM05D000733 ORTHO05D000649 3.3e-15 85.9 152 31.6
Psat1g209680 Pisum sativum HOM05D000733 ORTHO05D000649 3.3e-15 85.9 152 32.2
ECA233G2410 Erigeron canadensis HOM05D000980 ORTHO05D000649 4.3e-15 85.5 153 30.7
Glyma.15G065400 Glycine max HOM05D000733 ORTHO05D000649 5.6e-15 85.1 152 30.9
Glyma.13G248600 Glycine max HOM05D000733 ORTHO05D000649 7.3e-15 84.7 152 31.6
CiPaw.14G106700 Carya illinoinensis HOM05D000733 ORTHO05D000649 9.6e-15 84.3 152 28.3
Haze_23524 Corylus avellana HOM05D000980 ORTHO05D000649 1.3e-14 84.0 148 31.1
VMungo0540G2319 Vigna mungo HOM05D000733 ORTHO05D000649 1.3e-14 84.0 152 30.3
Medtr2g011350 Medicago truncatula HOM05D000980 ORTHO05D000649 2.8e-14 82.8 152 30.9
Aa31sc695G10 Aethionema arabicum HOM05D008748 ORTHO05D000649 4.8e-14 82.0 138 28.3
Manes.04G012200 Manihot esculenta HOM05D000733 ORTHO05D000649 8.1e-14 81.3 151 26.5
THA.LOC104800572 Tarenaya hassleriana HOM05D008748 ORTHO05D000649 8.1e-14 81.3 150 32.0
CANSAT64G2923 Cannabis sativa HOM05D000733 ORTHO05D000649 1.4e-13 80.5 152 27.6
DCAR_015500 Daucus carota HOM05D000980 ORTHO05D000649 4.0e-13 79.0 153 29.4
Manes.11G153200 Manihot esculenta HOM05D000980 ORTHO05D000649 4.0e-13 79.0 151 27.2
arahy.Tifrunner.gnm1.ann1.ECG1V9 Arachis hypogaea HOM05D000980 ORTHO05D000649 5.3e-13 78.6 152 28.3
QL01p014807 Quercus lobata HOM05D000733 ORTHO05D000649 5.3e-13 78.6 152 29.6
GSVIVG01031450001 Vitis vinifera HOM05D000980 ORTHO05D000649 5.3e-13 78.6 153 29.4
PSO339G2761 Papaver somniferum HOM05D000733 ORTHO05D000649 6.9e-13 78.2 151 27.2
TWI75G0760 Tripterygium wilfordii HOM05D000733 ORTHO05D000649 9.0e-13 77.8 148 29.1
HPP92_026747 Vanilla planifolia HOM05D000733 ORTHO05D000649 9.0e-13 77.8 153 30.7
Ah.01g016000 Amaranthus hybridus HOM05D000733 ORTHO05D000649 1.5e-12 77.0 152 28.9
PSO801G0405 Papaver somniferum HOM05D000733 ORTHO05D000649 7.6e-12 74.7 151 25.8
CSS0043169 Camellia sinensis var. sinensis HOM05D000733 ORTHO05D000649 1.3e-11 73.9 154 30.5
CSS0035712 Camellia sinensis var. sinensis HOM05D000733 ORTHO05D000649 2.2e-11 73.2 154 29.9
Potri.009G003800 Populus trichocarpa HOM05D000980 ORTHO05D000649 2.2e-11 73.2 151 26.5
TAR633G0760 Trochodendron aralioides HOM05D000980 ORTHO05D000649 2.2e-11 73.2 148 27.0
CAN.G246.4 Capsicum annuum HOM05D000980 ORTHO05D000649 2.9e-11 72.8 154 27.3
PGR119G1497 Punica granatum HOM05D000980 ORTHO05D000649 2.9e-11 72.8 151 30.5
Aqoxy1G01055 Aquilegia oxysepala HOM05D000980 ORTHO05D000649 3.8e-11 72.4 151 26.5
Carub.0001s0752 Capsella rubella HOM05D008748 ORTHO05D000649 3.8e-11 72.4 139 28.1
Cc01_g10170 Coffea canephora HOM05D000980 ORTHO05D000649 3.8e-11 72.4 152 27.6
CsaV3_1G014170 Cucumis sativus L. HOM05D000980 ORTHO05D000649 3.8e-11 72.4 149 27.5
Migut.N02538 Erythranthe guttata HOM05D000980 ORTHO05D000649 3.8e-11 72.4 152 28.3
Lalb_Chr20g0122491 Lupinus albus HOM05D000733 ORTHO05D000649 3.8e-11 72.4 152 27.6
AT1G08160 Arabidopsis thaliana HOM05D008748 ORTHO05D000649 4.9e-11 72.0 140 28.6
C08p03520 Brassica napus HOM05D008748 ORTHO05D000649 4.9e-11 72.0 139 27.3
A08p35310 Brassica napus HOM05D008748 ORTHO05D000649 6.4e-11 71.6 139 27.3
BraA08t35440Z Brassica rapa HOM05D008748 ORTHO05D000649 6.4e-11 71.6 139 27.3
CAN.G546.58 Capsicum annuum HOM05D000733 ORTHO05D000649 6.4e-11 71.6 154 27.3
Solyc11g066490.1 Solanum lycopersicum HOM05D000733 ORTHO05D000649 8.4e-11 71.2 152 24.3
Sopen11g026240 Solanum pennellii HOM05D000733 ORTHO05D000649 8.4e-11 71.2 152 24.3
THA.LOC104826392 Tarenaya hassleriana HOM05D008748 ORTHO05D000649 8.4e-11 71.2 150 28.7
Sabra09G0001500 Salix brachista HOM05D008748 ORTHO05D000649 1.1e-10 70.9 164 26.2
THA.LOC104810884 Tarenaya hassleriana HOM05D000733 ORTHO05D000649 1.1e-10 70.9 148 29.7
A06p05220 Brassica napus HOM05D008748 ORTHO05D000649 1.4e-10 70.5 138 26.8
BolC8t47156H Brassica oleracea HOM05D008748 ORTHO05D000649 1.4e-10 70.5 139 27.3
BraA06t23729Z Brassica rapa HOM05D008748 ORTHO05D000649 1.4e-10 70.5 138 26.8
Oeu035520.1 Olea europaea HOM05D000980 ORTHO05D000649 1.4e-10 70.5 153 27.5
PGSC0003DMG400000476 Solanum tuberosum HOM05D000733 ORTHO05D000649 1.4e-10 70.5 154 26.6
PGSC0003DMG400024324 Solanum tuberosum HOM05D000980 ORTHO05D000649 1.4e-10 70.5 154 27.3
Sp1g06810 Schrenkiella parvula HOM05D008748 ORTHO05D000649 1.9e-10 70.1 138 26.1
BcaC05g24735 Brassica carinata HOM05D008748 ORTHO05D000649 2.4e-10 69.7 139 26.6
Nitab4.5_0005152g0040 Nicotiana tabacum HOM05D000733 ORTHO05D000649 2.4e-10 69.7 154 25.3
Duzib170G0419 Durio zibethinus HOM05D000980 ORTHO05D000649 5.4e-10 68.6 153 26.1
BcaB03g13352 Brassica carinata HOM05D008748 ORTHO05D000649 7.1e-10 68.2 136 26.5
BcaC07g41960 Brassica carinata HOM05D008748 ORTHO05D000649 7.1e-10 68.2 139 25.2
BcaC07g42515 Brassica carinata HOM05D008748 ORTHO05D000649 7.1e-10 68.2 138 25.4
C05p06280 Brassica napus HOM05D008748 ORTHO05D000649 7.1e-10 68.2 139 26.6
A09p65980 Brassica napus HOM05D008748 ORTHO05D000649 9.3e-10 67.8 138 25.4
C08p50140 Brassica napus HOM05D008748 ORTHO05D000649 9.3e-10 67.8 138 25.4
BolC5t29385H Brassica oleracea HOM05D008748 ORTHO05D000649 9.3e-10 67.8 138 26.8
BolC8t52543H Brassica oleracea HOM05D008748 ORTHO05D000649 9.3e-10 67.8 138 25.4
Thhalv10009522m.g Eutrema salsugineum HOM05D008748 ORTHO05D000649 1.2e-09 67.4 138 26.1
BcaB07g34062 Brassica carinata HOM05D008748 ORTHO05D000649 1.6e-09 67.0 138 26.8
Carub.0006s2061 Capsella rubella HOM05D000733 ORTHO05D000649 2.1e-09 66.6 152 27.6
CARHR007990 Cardamine hirsuta HOM05D008748 ORTHO05D000649 2.1e-09 66.6 138 26.8
AL1G18560 Arabidopsis lyrata HOM05D008748 ORTHO05D000649 6.0e-09 65.1 140 26.4
Duzib150G0967 Durio zibethinus HOM05D000980 ORTHO05D000649 1.0e-08 64.3 148 25.0
Thhalv10015654m.g Eutrema salsugineum HOM05D000733 ORTHO05D000649 1.0e-08 64.3 151 27.2
CARHR190690 Cardamine hirsuta HOM05D000733 ORTHO05D000649 1.5e-07 60.5 152 25.7
Cfa021147 Carpinus fangiana HOM05D000980 ORTHO05D000649 3.3e-07 59.3 152 25.7
AL6G33990 Arabidopsis lyrata HOM05D000733 ORTHO05D000649 4.3e-07 58.9 152 24.3
SalBow3G1483 Salvia bowleyana HOM05D000980 ORTHO05D000649 7.4e-07 58.2 152 28.9
BcaC03g13927 Brassica carinata HOM05D000733 ORTHO05D000649 9.6e-07 57.8 152 24.3
BolC2t07209H Brassica oleracea HOM05D000733 ORTHO05D000649 9.6e-07 57.8 152 24.3
C02p11360 Brassica napus HOM05D000733 ORTHO05D000649 1.3e-06 57.4 152 24.3
BraA02t05696Z Brassica rapa HOM05D000733 ORTHO05D000649 2.8e-06 56.2 152 23.7
Thecc.09G296800 Theobroma cacao HOM05D000980 ORTHO05D000649 2.8e-06 56.2 99 26.3
Zm00001eb022900 Zea mays HOM05D000980 ORTHO05D000649 2.8e-06 56.2 116 30.2


User provided reference genes

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