Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 0.0e+00 1076.2 558 100.0
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.7e-231 805.4 478 89.7
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 4.3e-189 665.2 521 71.2
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.6e-146 523.1 509 57.8
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 8.8e-134 481.5 469 56.9
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.2e-133 481.1 475 54.3
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 5.9e-130 468.8 420 63.6
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.6e-125 453.4 489 53.8
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.9e-124 449.9 497 51.9
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 4.9e-124 449.1 476 52.1
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 7.0e-123 445.3 486 53.3
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.5e-122 443.0 486 53.3
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 4.6e-122 442.6 491 50.5
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 4.6e-122 442.6 469 53.7
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 7.8e-122 441.8 488 53.3
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 5.0e-121 439.1 466 53.2
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.5e-120 437.6 470 52.8
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.2e-119 434.5 463 52.7
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 6.2e-119 432.2 465 53.3
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 4.0e-118 429.5 492 49.8
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 4.4e-117 426.0 456 50.7
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.8e-117 425.6 455 53.2
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 2.2e-116 423.7 455 53.2
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 2.9e-116 423.3 522 48.5
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 4.9e-116 422.5 493 50.5
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 4.9e-116 422.5 486 51.0
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 6.4e-116 422.2 442 52.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.4e-115 420.2 456 51.1
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.2e-114 417.9 462 52.2
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.6e-114 417.5 443 52.8
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.0e-114 417.2 475 50.1
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 2.7e-114 416.8 487 48.5
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 3.5e-114 416.4 481 50.5
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 6.0e-114 415.6 453 53.0
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.3e-113 414.5 455 52.7
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 3.9e-113 412.9 472 50.4
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 6.6e-113 412.1 449 50.1
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 6.6e-113 412.1 493 49.5
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 6.6e-113 412.1 465 49.2
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.5e-112 411.0 470 49.1
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 2.5e-112 410.2 482 49.2
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 3.3e-112 409.8 517 48.2
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 4.3e-112 409.5 469 48.4
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 7.3e-112 408.7 459 50.1
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 9.5e-112 408.3 483 49.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 8.1e-111 405.2 485 47.8
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 1.4e-110 404.4 487 48.3
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 2.3e-110 403.7 448 49.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 5.2e-110 402.5 476 48.3
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 6.8e-110 402.1 454 50.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.5e-109 401.0 496 47.8
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 5.8e-109 399.1 509 47.3
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 5.8e-109 399.1 438 50.0
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 9.8e-109 398.3 457 50.8
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 9.8e-109 398.3 481 47.6
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 3.7e-108 396.4 474 47.0
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 8.3e-108 395.2 446 50.9
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.4e-107 393.7 535 45.6
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 4.1e-107 392.9 485 47.4
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 2.1e-106 390.6 467 49.3
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 2.7e-106 390.2 477 49.5
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 4.6e-106 389.4 458 49.1
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.7e-105 387.5 476 47.9
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 2.3e-105 387.1 446 48.7
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 3.9e-105 386.3 465 47.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 6.6e-105 385.6 480 48.1
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 9.5e-104 381.7 463 46.9
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.2e-103 381.3 466 47.2
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.6e-103 380.9 460 46.7
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 4.7e-103 379.4 481 46.2
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 4.0e-102 376.3 447 48.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 5.2e-102 375.9 432 50.2
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 3.4e-101 373.2 452 47.8
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.3e-100 371.3 466 47.0
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 4.9e-100 369.4 461 45.6
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 3.2e-99 366.7 363 52.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.2e-98 364.8 394 51.8
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 4.6e-98 362.8 471 46.7
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 4.6e-98 362.8 446 48.0
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 6.0e-98 362.5 473 45.7
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 6.0e-98 362.5 473 45.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.0e-97 361.7 504 43.7
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 1.7e-97 360.9 529 43.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 3.0e-97 360.1 477 45.7
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.2e-95 354.8 476 46.2
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.4e-94 351.3 477 44.2
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 1.9e-91 340.9 343 54.2
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.9e-91 340.9 353 54.1
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 3.2e-91 340.1 440 46.4
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.1e-90 337.4 470 45.7
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 3.5e-90 336.7 451 43.7
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 6.6e-89 332.4 437 45.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 6.6e-81 305.8 541 38.4
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.9e-75 287.7 414 44.2
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 9.3e-75 285.4 523 38.4
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.1e-74 284.3 500 38.6
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.1e-67 261.9 262 58.8
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.8e-65 254.6 442 37.1
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 6.3e-63 246.1 462 37.2
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 9.0e-62 242.3 415 39.5
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.9e-59 234.6 516 33.1
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 3.5e-58 230.3 322 41.0
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 8.7e-57 225.7 287 43.6
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.1e-54 216.9 310 41.0
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.3e-54 216.5 191 57.1
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.8e-41 174.9 167 54.5
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 6.7e-41 172.9 220 45.9
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.5e-40 171.8 278 41.7
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 9.4e-35 152.5 209 45.5
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 3.7e-31 140.6 188 45.2
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 1.4e-30 138.7 192 41.7
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 2.0e-29 134.8 124 52.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.0e-21 108.2 112 51.8
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 3.4e-16 90.9 252 27.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.7e-12 78.6 65 58.5
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.4e-08 64.3 93 39.8
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 7.5e-08 63.2 131 35.9
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 7.5e-08 63.2 61 55.7
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 2.9e-07 61.2 133 33.1
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 4.9e-07 60.5 33 81.8


User provided reference genes

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