Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.7e-171 605.9 303 100.0
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 3.5e-153 545.0 303 91.4
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 9.6e-143 510.4 303 84.2
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 9.7e-127 457.2 303 74.9
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 3.1e-125 452.2 298 76.5
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 2.8e-110 402.5 306 66.3
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 2.5e-98 362.8 300 63.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 4.2e-98 362.1 306 61.1
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 7.2e-98 361.3 306 61.8
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 3.6e-97 359.0 300 64.0
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 3.6e-97 359.0 306 61.1
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 3.6e-97 359.0 305 59.7
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 3.6e-97 359.0 305 60.3
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 4.7e-97 358.6 295 63.4
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.0e-96 357.5 305 61.0
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.4e-96 357.1 305 61.0
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.3e-96 356.3 299 61.5
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 4.0e-96 355.5 305 60.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.2e-96 355.1 306 62.4
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 5.7e-95 351.7 305 59.7
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 7.5e-95 351.3 306 60.1
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.8e-94 349.4 305 59.3
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 6.3e-94 348.2 303 60.1
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.1e-93 347.4 315 56.8
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.1e-93 347.4 301 59.1
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.8e-93 346.7 305 58.7
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.8e-93 346.7 307 58.3
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 5.9e-92 341.7 301 58.5
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 2.3e-91 339.7 363 51.5
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 2.5e-90 336.3 303 58.7
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 1.2e-89 334.0 303 55.4
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 2.8e-89 332.8 303 57.1
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 2.8e-89 332.8 305 57.0
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 4.7e-89 332.0 311 56.9
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 8.0e-89 331.3 303 56.4
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.4e-88 330.5 301 56.1
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.4e-88 330.5 309 55.7
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.8e-88 330.1 303 56.4
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 2.3e-88 329.7 299 57.5
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 5.2e-88 328.6 302 56.6
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 5.2e-88 328.6 308 55.2
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 8.9e-88 327.8 309 55.7
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 1.2e-87 327.4 306 55.2
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 2.0e-87 326.6 303 55.8
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 3.4e-87 325.9 303 55.4
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 4.4e-87 325.5 329 54.1
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 4.4e-87 325.5 297 57.2
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 9.8e-87 324.3 303 55.1
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.3e-86 323.9 310 54.8
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 6.4e-86 321.6 303 56.1
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 6.4e-86 321.6 304 54.6
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.1e-85 320.9 306 55.9
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.4e-85 320.5 306 55.6
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 2.4e-85 319.7 303 54.8
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.2e-85 319.3 303 56.8
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 4.1e-85 318.9 301 53.5
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 4.1e-85 318.9 299 56.5
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.6e-84 317.0 301 54.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 2.0e-84 316.6 304 53.9
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 3.5e-84 315.8 303 52.1
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 7.8e-84 314.7 303 55.1
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 7.8e-84 314.7 303 55.1
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.0e-83 314.3 303 53.8
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.0e-83 314.3 306 53.3
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.0e-83 314.3 300 54.3
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 2.3e-83 313.2 299 53.8
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.3e-83 313.2 299 53.8
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 3.0e-83 312.8 297 56.9
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 6.6e-83 311.6 304 51.6
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 6.6e-83 311.6 305 52.8
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.1e-82 310.8 303 52.5
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.5e-82 309.7 303 54.1
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 3.3e-82 309.3 303 54.1
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 3.3e-82 309.3 303 54.1
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 3.3e-82 309.3 303 52.8
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 4.3e-82 308.9 287 57.8
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 4.3e-82 308.9 303 53.1
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.6e-82 308.5 301 51.8
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 9.5e-82 307.8 300 52.3
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.1e-81 306.6 313 52.4
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.1e-81 306.6 303 55.4
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.1e-80 304.3 303 52.1
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.4e-80 303.9 297 55.6
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.4e-80 303.9 302 53.3
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.3e-80 303.1 307 52.8
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.2e-80 302.0 300 53.7
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.2e-79 300.8 310 51.0
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.3e-78 297.4 301 53.2
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 6.0e-76 288.5 315 49.2
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.0e-75 287.7 315 49.2
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.9e-74 283.5 299 49.8
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 3.4e-71 272.7 303 48.2
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.0e-67 261.2 305 44.9
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 8.1e-65 251.5 265 49.4
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.4e-63 246.1 303 48.2
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.1e-60 236.9 210 58.6
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 3.5e-60 236.1 245 50.2
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 4.0e-56 222.6 241 50.6
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.5e-55 220.7 312 41.0
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 6.0e-52 208.8 269 45.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.6e-49 200.7 201 53.7
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.2e-46 190.3 196 51.0
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 3.1e-40 169.9 251 40.2
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 9.9e-39 164.9 203 48.8
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.8e-38 162.9 105 73.3
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.7e-36 156.8 195 45.1
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.5e-31 141.0 305 29.8
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 5.5e-29 132.5 121 54.5
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.6e-28 131.0 214 36.9
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 5.7e-26 122.5 146 46.6
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-25 121.3 145 46.9
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 2.2e-25 120.6 145 46.2
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 2.5e-21 107.1 120 45.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 2.5e-21 107.1 123 48.8
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 4.2e-21 106.3 123 48.8
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 7.2e-21 105.5 100 53.0
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.1e-20 104.0 249 33.3
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 7.9e-20 102.1 150 40.7
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 8.8e-19 98.6 283 29.3
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 2.2e-17 94.0 121 44.6
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 2.6e-15 87.0 68 57.4
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 5.9e-15 85.9 67 58.2
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 3.8e-14 83.2 129 38.8
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.8e-11 74.3 62 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 3.3e-10 70.1 120 35.0
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 4.1e-08 63.2 85 44.7


User provided reference genes

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