Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 5.0e-85 318.2 217 100.0
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.2e-57 227.3 244 75.4
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 2.0e-41 173.3 258 63.6
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 4.5e-41 172.2 215 65.6
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 5.8e-41 171.8 215 65.1
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.3e-40 170.6 112 82.1
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 2.9e-40 169.5 105 84.8
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 4.9e-40 168.7 217 66.8
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 8.4e-40 167.9 119 74.8
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 1.1e-39 167.5 117 76.9
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.4e-39 167.2 115 77.4
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.4e-39 167.2 115 77.4
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.4e-39 166.4 217 64.5
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 3.2e-39 166.0 109 79.8
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 3.2e-39 166.0 109 79.8
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 4.2e-39 165.6 107 77.6
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 5.5e-39 165.2 115 75.7
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 5.5e-39 165.2 109 78.9
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 5.5e-39 165.2 107 81.3
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 7.1e-39 164.9 107 81.3
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 7.1e-39 164.9 107 81.3
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 9.3e-39 164.5 118 74.6
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 9.3e-39 164.5 112 74.1
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 9.3e-39 164.5 112 74.1
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 9.3e-39 164.5 103 82.5
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.2e-38 164.1 215 64.7
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 1.6e-38 163.7 115 75.7
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 2.1e-38 163.3 106 81.1
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 2.1e-38 163.3 109 77.1
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 2.7e-38 162.9 106 81.1
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 2.7e-38 162.9 119 73.9
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 3.5e-38 162.5 118 73.7
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 3.5e-38 162.5 112 76.8
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 3.5e-38 162.5 112 76.8
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 4.6e-38 162.2 118 73.7
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 7.9e-38 161.4 215 68.4
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 7.9e-38 161.4 124 71.8
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.0e-37 161.0 103 83.5
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.3e-37 160.6 107 79.4
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.3e-37 160.6 107 79.4
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 1.8e-37 160.2 119 72.3
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 1.8e-37 160.2 115 73.9
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 1.8e-37 160.2 106 79.2
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 1.8e-37 160.2 115 75.7
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.8e-37 160.2 114 72.8
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 2.3e-37 159.8 108 76.9
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 2.3e-37 159.8 105 79.0
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 2.3e-37 159.8 108 76.9
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 3.0e-37 159.5 115 75.7
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 3.0e-37 159.5 107 77.6
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 3.0e-37 159.5 108 77.8
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 3.0e-37 159.5 119 72.3
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 3.9e-37 159.1 115 73.0
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 3.9e-37 159.1 115 73.0
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 5.1e-37 158.7 107 76.6
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 5.1e-37 158.7 112 75.0
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 5.1e-37 158.7 115 75.7
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 5.1e-37 158.7 112 75.0
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 6.7e-37 158.3 112 75.0
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 6.7e-37 158.3 115 73.0
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 8.7e-37 157.9 109 76.1
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 8.7e-37 157.9 109 76.1
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 8.7e-37 157.9 108 76.9
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 8.7e-37 157.9 108 76.9
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 8.7e-37 157.9 115 73.9
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.1e-36 157.5 115 70.4
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 1.1e-36 157.5 112 75.0
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 1.1e-36 157.5 108 75.9
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.1e-36 157.5 109 74.3
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 1.5e-36 157.1 112 73.2
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 1.5e-36 157.1 115 73.0
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 1.5e-36 157.1 116 73.3
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 1.9e-36 156.8 133 64.7
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 1.9e-36 156.8 114 72.8
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.9e-36 156.8 109 76.1
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 2.5e-36 156.4 108 75.9
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 2.5e-36 156.4 117 72.6
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 2.5e-36 156.4 119 69.7
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 3.3e-36 156.0 217 59.0
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 3.3e-36 156.0 112 74.1
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 3.3e-36 156.0 112 74.1
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 3.3e-36 156.0 270 54.1
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 4.3e-36 155.6 108 75.0
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 4.3e-36 155.6 117 71.8
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 4.3e-36 155.6 109 76.1
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 7.4e-36 154.8 112 73.2
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 9.6e-36 154.5 215 61.4
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 1.3e-35 154.1 112 72.3
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-35 154.1 112 73.2
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-35 154.1 115 73.0
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 1.3e-35 154.1 104 76.0
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 1.6e-35 153.7 115 73.0
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 1.6e-35 153.7 108 75.0
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.6e-35 153.7 109 73.4
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 1.6e-35 153.7 119 69.7
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 2.1e-35 153.3 115 73.0
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 2.1e-35 153.3 103 75.7
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 2.1e-35 153.3 103 75.7
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 3.7e-35 152.5 112 72.3
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 6.2e-35 151.8 107 74.8
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 6.2e-35 151.8 119 69.7
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-34 151.0 111 72.1
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-34 151.0 111 72.1
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 1.1e-34 151.0 111 72.1
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.4e-34 150.6 105 74.3
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 1.4e-34 150.6 109 71.6
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 1.8e-34 150.2 116 69.0
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 1.2e-33 147.5 105 70.5
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 1.2e-33 147.5 105 70.5
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 2.0e-33 146.7 118 68.6
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 2.6e-33 146.4 112 71.4
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 2.6e-33 146.4 112 71.4
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 2.6e-33 146.4 107 73.8
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 4.5e-33 145.6 104 71.2
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 4.5e-33 145.6 118 68.6
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 2.1e-30 136.7 111 64.9
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 4.6e-30 135.6 88 79.5
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 1.0e-29 134.4 114 62.3
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 1.8e-29 133.7 120 63.3
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 2.3e-29 133.3 303 49.2
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 1.5e-28 130.6 118 60.2
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 1.1e-26 124.4 188 65.4
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 2.4e-26 123.2 78 80.8
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 2.4e-26 123.2 167 46.7
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 1.3e-24 117.5 77 75.3
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 3.8e-24 115.9 121 56.2
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 2.5e-23 113.2 65 81.5
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 2.5e-23 113.2 65 81.5
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 3.2e-23 112.8 193 40.4
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.7e-22 109.8 76 69.7
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 3.6e-22 109.4 89 65.2
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 7.9e-22 108.2 86 66.3
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 4.3e-20 102.4 92 63.0
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 2.8e-19 99.8 227 34.4
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 3.7e-19 99.4 70 71.4
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 6.9e-18 95.1 84 63.1
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 2.6e-17 93.2 79 60.8
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 6.5e-16 88.6 84 58.3
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 4.2e-15 85.9 116 46.6
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 1.6e-14 84.0 82 56.1
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 1.6e-14 84.0 142 42.3
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 3.6e-14 82.8 81 56.8
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 2.3e-13 80.1 81 58.0
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 2.3e-13 80.1 252 43.3
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 6.7e-13 78.6 79 54.4
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 8.8e-13 78.2 61 67.2
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 1.8e-10 70.5 113 45.1
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 1.5e-09 67.4 35 80.0
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 2.0e-09 67.0 58 69.0
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.3e-08 64.3 50 72.0
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 5.0e-08 62.4 89 46.1
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 8.5e-08 61.6 43 76.7
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 2.7e-06 56.6 50 64.0
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 6.1e-06 55.5 46 67.4


User provided reference genes

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