Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 3.8e-26 120.9 69 100.0
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 9.2e-25 116.3 69 95.7
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.6e-24 115.5 68 82.4
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 2.4e-20 101.7 70 81.4
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 6.9e-20 100.1 71 80.3
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 4.4e-19 97.4 69 75.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 9.9e-19 96.3 77 76.6
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.3e-18 95.9 73 69.9
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.3e-18 95.9 75 77.3
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.3e-18 95.9 75 77.3
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.3e-18 95.9 75 77.3
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.3e-18 95.9 75 77.3
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.7e-18 95.5 76 76.3
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 2.2e-18 95.1 70 81.4
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.8e-18 94.4 70 77.1
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.8e-18 94.4 70 77.1
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 4.9e-18 94.0 69 75.4
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.1e-17 92.8 70 75.7
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.4e-17 92.4 69 73.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 1.4e-17 92.4 69 73.9
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.4e-17 92.4 70 72.9
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.4e-17 92.4 70 72.9
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.9e-17 92.0 74 73.0
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.9e-17 92.0 74 73.0
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.4e-17 91.7 73 79.5
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 2.4e-17 91.7 71 80.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 3.2e-17 91.3 70 70.0
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 3.2e-17 91.3 70 70.0
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 3.2e-17 91.3 70 70.0
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 7.1e-17 90.1 71 80.3
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 7.1e-17 90.1 70 75.7
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 9.3e-17 89.7 71 83.1
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.2e-16 89.4 69 75.4
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.2e-16 89.4 69 72.5
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.2e-16 89.4 69 72.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.2e-16 89.4 69 71.0
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.2e-16 89.4 69 71.0
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.2e-16 89.4 69 72.5
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.6e-16 89.0 72 72.2
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 1.6e-16 89.0 68 76.5
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.6e-16 89.0 75 74.7
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.1e-16 88.6 71 73.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.5e-16 87.8 70 68.6
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 6.0e-16 87.0 69 66.7
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 6.0e-16 87.0 70 72.9
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.0e-15 86.3 77 72.7
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.0e-15 86.3 70 71.4
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.7e-15 85.5 68 67.6
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 3.0e-15 84.7 74 75.7
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 3.0e-15 84.7 69 65.2
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.9e-15 84.3 70 75.7
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.9e-15 84.3 70 64.3
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 5.1e-15 84.0 69 68.1
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.6e-15 83.6 70 64.3
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 8.7e-15 83.2 70 70.0
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 8.7e-15 83.2 70 77.1
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.1e-14 82.8 74 75.7
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.1e-14 82.8 68 79.4
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.1e-14 82.8 70 80.0
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.1e-14 82.8 70 80.0
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.1e-14 82.8 70 80.0
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.1e-14 82.8 69 72.5
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.5e-14 82.4 76 73.7
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.5e-14 82.4 75 61.3
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.9e-14 82.0 69 78.3
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.5e-14 81.6 70 70.0
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 4.3e-14 80.9 77 72.7
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 4.3e-14 80.9 70 70.0
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 4.3e-14 80.9 69 72.5
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.6e-14 80.5 70 78.6
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 7.3e-14 80.1 71 69.0
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 7.3e-14 80.1 69 69.6
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 7.3e-14 80.1 74 71.6
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 7.3e-14 80.1 69 69.6
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 9.6e-14 79.7 72 76.4
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.6e-13 79.0 69 76.8
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 1.6e-13 79.0 68 75.0
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 3.6e-13 77.8 68 76.5
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 4.8e-13 77.4 71 71.8
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 6.2e-13 77.0 73 74.0
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 6.2e-13 77.0 71 73.2
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 6.2e-13 77.0 71 73.2
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 8.1e-13 76.6 73 74.0
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.1e-12 76.3 76 68.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.8e-12 75.5 78 64.1
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.8e-12 75.5 70 77.1
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.8e-12 75.5 70 75.7
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.8e-12 75.5 59 79.7
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.4e-12 75.1 76 68.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 6.9e-12 73.6 78 57.7
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.5e-11 72.4 69 73.9
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.0e-11 72.0 71 73.2
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 4.5e-11 70.9 70 64.3
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 7.6e-11 70.1 63 65.1
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 9.9e-11 69.7 69 66.7
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.2e-10 68.6 68 69.1
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.8e-10 67.8 65 56.9
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 8.4e-10 66.6 71 67.6
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.4e-09 65.9 67 61.2
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.4e-09 65.9 68 51.5
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 2.4e-09 65.1 49 71.4
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 4.2e-09 64.3 50 72.0
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 7.1e-09 63.5 45 73.3
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 9.3e-09 63.2 71 66.2
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.2e-08 62.8 68 67.6
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 1.6e-08 62.4 61 73.8
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.7e-08 61.6 64 71.9
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 6.0e-08 60.5 51 74.5
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 7.9e-08 60.1 46 73.9
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 3.9e-07 57.8 56 67.9
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.1e-07 57.4 49 77.6
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 6.7e-07 57.0 74 54.1
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 8.7e-07 56.6 73 57.5
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 7.4e-06 53.5 47 85.1


User provided reference genes

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