Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 4.9e-257 890.6 434 100.0
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 2.2e-249 865.1 434 96.8
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 2.4e-203 712.2 434 78.1
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 1.7e-188 662.9 434 73.7
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 3.4e-173 612.1 472 65.5
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 7.0e-163 577.8 429 66.9
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 2.5e-160 569.3 443 63.0
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 1.6e-159 566.6 434 62.9
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 4.4e-157 558.5 444 63.1
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 1.1e-155 553.9 430 62.8
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 9.2e-155 550.8 391 65.5
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 1.0e-153 547.4 404 65.3
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 3.9e-153 545.4 434 60.6
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 5.1e-153 545.0 435 62.5
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 4.3e-152 542.0 442 61.1
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 1.6e-151 540.0 411 64.5
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.8e-150 536.6 437 61.3
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 4.0e-150 535.4 438 60.7
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 6.8e-150 534.6 436 60.1
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 8.9e-150 534.3 445 60.7
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.2e-149 533.9 429 60.1
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 1.2e-149 533.9 429 61.1
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 2.0e-149 533.1 420 60.7
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 2.6e-149 532.7 429 60.6
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 1.7e-148 530.0 429 59.2
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.2e-148 529.6 363 68.0
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 2.9e-148 529.3 365 67.1
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 3.8e-148 528.9 442 58.4
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 1.9e-147 526.6 451 58.3
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 1.9e-147 526.6 436 60.1
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 3.2e-147 525.8 437 59.7
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 4.2e-147 525.4 437 59.7
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 5.4e-147 525.0 411 62.0
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 5.4e-147 525.0 437 59.7
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 7.1e-147 524.6 442 59.0
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 7.1e-147 524.6 437 59.3
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 7.1e-147 524.6 444 59.5
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.1e-146 523.1 433 60.5
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.5e-146 522.3 443 59.8
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 4.6e-146 521.9 385 64.2
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.7e-145 520.0 435 59.5
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.7e-145 520.0 441 59.6
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 2.3e-145 519.6 436 58.0
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.6e-145 518.1 429 60.8
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 1.9e-144 516.5 444 57.9
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 1.9e-144 516.5 437 58.1
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 3.3e-144 515.8 439 57.6
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 3.3e-144 515.8 405 61.2
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 3.3e-144 515.8 425 61.2
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 5.6e-144 515.0 437 58.4
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 1.3e-143 513.8 433 58.9
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 1.6e-143 513.5 437 59.7
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.1e-143 513.1 425 60.9
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 2.1e-143 513.1 355 66.2
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 3.6e-143 512.3 369 64.8
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 4.8e-143 511.9 430 59.3
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 6.2e-143 511.5 430 59.3
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 1.1e-142 510.8 438 58.7
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 1.4e-142 510.4 430 59.1
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 2.4e-142 509.6 446 57.4
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 2.4e-142 509.6 418 58.1
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 4.0e-142 508.8 403 61.0
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 6.9e-142 508.1 444 57.0
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 1.5e-141 506.9 393 62.1
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 4.4e-141 505.4 441 56.5
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 4.4e-141 505.4 436 56.9
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 8.4e-140 501.1 391 63.2
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 4.2e-139 498.8 424 57.8
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 1.7e-137 493.4 423 57.7
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 1.7e-137 493.4 402 59.5
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 1.7e-137 493.4 443 55.5
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 1.7e-137 493.4 384 60.2
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 3.9e-137 492.3 429 57.3
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 8.7e-137 491.1 469 52.9
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.5e-136 490.3 454 56.2
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 1.5e-136 490.3 384 62.2
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 2.5e-136 489.6 436 56.4
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 2.5e-136 489.6 435 56.8
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.5e-136 489.6 408 60.5
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 3.3e-136 489.2 432 57.4
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 9.6e-136 487.6 423 57.2
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.6e-135 486.9 438 57.3
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 2.1e-135 486.5 433 53.6
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 1.4e-134 483.8 365 62.5
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.3e-132 477.2 365 62.2
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 3.5e-130 469.2 437 54.7
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 6.7e-129 464.9 323 65.9
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 1.9e-128 463.4 434 53.9
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 3.1e-126 456.1 323 67.5
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 3.4e-125 452.6 531 46.5
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 7.6e-125 451.4 364 58.0
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 7.9e-122 441.4 438 52.7
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 2.3e-121 439.9 427 52.5
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 1.9e-120 436.8 352 59.9
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 7.4e-112 408.3 353 58.9
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 4.1e-94 349.4 364 46.7
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 3.5e-93 346.3 333 52.6
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 1.0e-92 344.7 255 63.9
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 3.8e-92 342.8 274 61.3
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 4.1e-86 322.8 422 41.7
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 5.0e-84 315.8 342 45.6
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.8e-81 307.4 342 45.9
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 4.0e-81 306.2 332 46.4
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.2e-76 290.4 435 39.3
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 1.1e-75 288.1 402 40.5
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 8.0e-74 282.0 226 61.5
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 1.8e-57 227.6 372 34.1
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 5.6e-51 206.1 182 58.2
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 8.6e-44 182.2 142 60.6
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 8.6e-36 155.6 120 63.3
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 1.1e-25 122.1 119 49.6
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 7.9e-13 79.3 50 60.0
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 1.4e-09 68.6 56 53.6
AUR62027250 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.5e-08 63.5 34 91.2


User provided reference genes

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