Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023416 Chenopodium quinoa HOM05D009224 ORTHO05D010030 3.7e-48 194.5 95 100.0
AUR62013737 Chenopodium quinoa HOM05D009224 ORTHO05D010030 9.7e-25 116.7 98 66.3
AUR62023417 Chenopodium quinoa HOM05D000204 ORTHO05D010030 4.5e-22 107.8 78 70.5
AUR62023413 Chenopodium quinoa HOM05D000204 ORTHO05D010030 3.8e-21 104.8 89 59.6
AUR62044609 Chenopodium quinoa HOM05D009224 ORTHO05D010030 3.8e-21 104.8 78 65.4
AUR62007731 Chenopodium quinoa HOM05D000204 ORTHO05D010030 6.5e-21 104.0 88 60.2
AUR62013739 Chenopodium quinoa HOM05D000204 ORTHO05D010030 1.1e-20 103.2 90 57.8
AUR62013407 Chenopodium quinoa HOM05D000204 ORTHO05D010030 1.5e-20 102.8 87 58.6
AUR62044611 Chenopodium quinoa HOM05D000204 ORTHO05D010030 1.9e-20 102.4 88 60.2
AUR62007732 Chenopodium quinoa HOM05D000204 ORTHO05D010030 3.2e-20 101.7 88 59.1
AUR62007733 Chenopodium quinoa HOM05D000204 ORTHO05D010030 3.2e-20 101.7 88 59.1
AUR62023414 Chenopodium quinoa HOM05D000204 ORTHO05D010030 3.2e-20 101.7 87 58.6
AUR62044771 Chenopodium quinoa HOM05D000204 ORTHO05D010030 3.2e-20 101.7 88 59.1
EL10Ac1g00768 Beta vulgaris HOM05D000204 ORTHO05D010030 4.2e-20 101.3 87 60.9
AUR62023415 Chenopodium quinoa HOM05D000204 ORTHO05D010030 5.5e-20 100.9 94 55.3
AUR62013738 Chenopodium quinoa HOM05D000204 ORTHO05D010030 1.6e-19 99.4 75 61.3
AUR62044610 Chenopodium quinoa HOM05D000204 ORTHO05D010030 1.6e-19 99.4 75 61.3
AUR62013736 Chenopodium quinoa HOM05D000204 ORTHO05D010030 2.1e-19 99.0 87 62.1
AUR62013408 Chenopodium quinoa HOM05D000204 ORTHO05D010030 3.6e-19 98.2 88 56.8
Sc13g0004260 Simmondsia chinensis HOM05D000204 ORTHO05D010030 1.5e-12 76.3 97 46.4
Sc12g0004800 Simmondsia chinensis HOM05D000204 ORTHO05D010030 1.4e-10 69.7 82 47.6
Ciclev10033958m.g Citrus clementina HOM05D009224 ORTHO05D010030 2.3e-10 68.9 90 40.0
EL10Ac1g00767 Beta vulgaris HOM05D000204 ORTHO05D010030 3.0e-10 68.6 56 58.9
Eucgr.K01226 Eucalyptus grandis HOM05D009224 ORTHO05D010030 8.8e-10 67.0 90 38.9
ATR0763G148 Amborella trichopoda HOM05D000204 ORTHO05D010030 1.5e-09 66.2 89 38.2
ECA232G5006 Erigeron canadensis HOM05D000057 ORTHO05D001897 2.0e-09 65.9 90 40.0
Sc25g0004430 Simmondsia chinensis HOM05D000204 ORTHO05D010030 5.7e-09 64.3 70 48.6
Ah.08g223380 Amaranthus hybridus HOM05D000204 ORTHO05D010030 1.3e-08 63.2 61 50.8
Sopen07g023620 Solanum pennellii HOM05D009224 ORTHO05D010030 1.3e-08 63.2 63 46.0
Ciclev10033945m.g Citrus clementina HOM05D009224 ORTHO05D010030 2.2e-08 62.4 81 39.5
Solyc07g045060.1 Solanum lycopersicum HOM05D009224 ORTHO05D010030 2.8e-08 62.0 63 44.4
Cpa.g.sc50.109 Carica papaya HOM05D009224 ORTHO05D010030 6.3e-08 60.8 56 55.4
QL08p044970 Quercus lobata HOM05D009224 ORTHO05D010030 6.3e-08 60.8 76 44.7
PGSC0003DMG400035516 Solanum tuberosum HOM05D009224 ORTHO05D010030 6.3e-08 60.8 63 44.4
AUR62001540 Chenopodium quinoa HOM05D000204 ORTHO05D010030 8.3e-08 60.5 88 42.0
Oeu023680.1 Olea europaea HOM05D000057 ORTHO05D001897 1.4e-07 59.7 67 38.8
Prupe.3G177500 Prunus persica HOM05D009224 ORTHO05D010030 1.4e-07 59.7 72 43.1
Peaxi162Scf00359g00079 Petunia axillaris HOM05D009224 ORTHO05D010030 1.8e-07 59.3 76 36.8
Sc13g0004250 Simmondsia chinensis HOM05D000204 ORTHO05D010030 1.8e-07 59.3 80 42.5
Eucgr.A01420 Eucalyptus grandis HOM05D000204 ORTHO05D001897 2.4e-07 58.9 74 37.8
EL10Ac7g16318 Beta vulgaris HOM05D000204 ORTHO05D010030 4.1e-07 58.2 61 47.5
Lalb_Chr19g0133351 Lupinus albus HOM05D000204 ORTHO05D002882 4.1e-07 58.2 84 42.9
GSVIVG01020838001 Vitis vinifera HOM05D009224 ORTHO05D010030 4.1e-07 58.2 86 43.0
Solyc01g096340.3 Solanum lycopersicum HOM05D000057 ORTHO05D001897 5.4e-07 57.8 77 33.8
Sopen01g040090 Solanum pennellii HOM05D000057 ORTHO05D001897 5.4e-07 57.8 77 33.8
HanXRQChr13g0409361 Helianthus annuus HOM05D000204 ORTHO05D002882 7.0e-07 57.4 84 39.3
Nitab4.5_0003694g0010 Nicotiana tabacum HOM05D009224 ORTHO05D010030 7.0e-07 57.4 62 45.2
ATR0763G072 Amborella trichopoda HOM05D000204 ORTHO05D010030 9.2e-07 57.0 83 37.3
HanXRQChr11g0335701 Helianthus annuus HOM05D000204 ORTHO05D002882 1.2e-06 56.6 81 39.5
HanXRQChr03g0078271 Helianthus annuus HOM05D000204 ORTHO05D002882 1.6e-06 56.2 84 39.3
Os01g0768333 Oryza sativa ssp. japonica HOM05D012371 ORTHO05D010030 1.6e-06 56.2 73 39.7
Ah.16g106430 Amaranthus hybridus HOM05D000204 ORTHO05D002882 2.0e-06 55.8 79 41.8
CDE01G0111 Ceratophyllum demersum HOM05D000204 ORTHO05D002882 2.0e-06 55.8 79 40.5
Nitab4.5_0000134g0010 Nicotiana tabacum HOM05D000204 ORTHO05D002882 2.0e-06 55.8 65 47.7
Peaxi162Scf00006g00111 Petunia axillaris HOM05D000204 ORTHO05D002882 2.0e-06 55.8 66 43.9
PGR142G1225 Punica granatum HOM05D000057 ORTHO05D001897 2.0e-06 55.8 80 37.5
Atru.chr6.2048 Acer truncatum HOM05D009224 ORTHO05D010030 2.7e-06 55.5 81 40.7
AUR62010342 Chenopodium quinoa HOM05D000057 ORTHO05D000021 2.7e-06 55.5 77 40.3
FAN02G4494 Fragaria x ananassa HOM05D009224 ORTHO05D010030 2.7e-06 55.5 55 52.7
Potri.002G057500 Populus trichocarpa HOM05D000204 ORTHO05D010030 2.7e-06 55.5 84 36.9
Psat4g179960 Pisum sativum HOM05D000204 ORTHO05D002882 3.5e-06 55.1 65 44.6
BcaB06g25507 Brassica carinata HOM05D000204 ORTHO05D002882 4.5e-06 54.7 71 45.1
A01p40700 Brassica napus HOM05D000204 ORTHO05D002882 4.5e-06 54.7 71 45.1
C08p44460 Brassica napus HOM05D000204 ORTHO05D002882 4.5e-06 54.7 70 45.7
BolC1t05176H Brassica oleracea HOM05D000204 ORTHO05D002882 4.5e-06 54.7 65 46.2
BolC8t51987H Brassica oleracea HOM05D000204 ORTHO05D002882 4.5e-06 54.7 70 45.7
BraA01t04104Z Brassica rapa HOM05D000204 ORTHO05D002882 4.5e-06 54.7 71 45.1
MELO3C034602.2 Cucumis melo HOM05D000057 ORTHO05D000021 4.5e-06 54.7 66 40.9
CsaV3_2G015520 Cucumis sativus L. HOM05D000057 ORTHO05D000021 4.5e-06 54.7 69 40.6
DCAR_009647 Daucus carota HOM05D000204 ORTHO05D002882 4.5e-06 54.7 79 39.2
DCAR_023046 Daucus carota HOM05D009224 ORTHO05D010030 4.5e-06 54.7 75 41.3
FAN05G5798 Fragaria x ananassa HOM05D009224 ORTHO05D010030 4.5e-06 54.7 59 47.5
BcaC09g48266 Brassica carinata HOM05D000204 ORTHO05D002882 5.9e-06 54.3 71 45.1
C01p52330 Brassica napus HOM05D000204 ORTHO05D002882 5.9e-06 54.3 71 45.1
CAN.G1500.7 Capsicum annuum HOM05D009224 ORTHO05D010030 5.9e-06 54.3 63 34.9
Gohir.A08G232500 Gossypium hirsutum HOM05D000204 ORTHO05D002882 5.9e-06 54.3 68 45.6
Gohir.D08G252700 Gossypium hirsutum HOM05D000204 ORTHO05D002882 5.9e-06 54.3 68 45.6
Gorai.004G269500 Gossypium raimondii HOM05D000204 ORTHO05D002882 5.9e-06 54.3 68 45.6
HanXRQChr02g0048411 Helianthus annuus HOM05D000057 ORTHO05D001897 5.9e-06 54.3 74 36.5
HanXRQChr15g0485531 Helianthus annuus HOM05D000057 ORTHO05D001897 5.9e-06 54.3 57 45.6
Lj3g0023479 Lotus japonicus HOM05D000204 ORTHO05D002882 5.9e-06 54.3 70 41.4
Lalb_Chr03g0031661 Lupinus albus HOM05D000204 ORTHO05D002882 5.9e-06 54.3 67 44.8
SalBow5G2202 Salvia bowleyana HOM05D000057 ORTHO05D000021 5.9e-06 54.3 80 37.5
PGSC0003DMG400000129 Solanum tuberosum HOM05D000057 ORTHO05D001897 5.9e-06 54.3 72 33.3
THA.LOC104819634 Tarenaya hassleriana HOM05D000057 ORTHO05D000021 5.9e-06 54.3 61 39.3
BcaC05g29234 Brassica carinata HOM05D000204 ORTHO05D002882 7.8e-06 53.9 71 45.1
A05p36650 Brassica napus HOM05D000204 ORTHO05D002882 7.8e-06 53.9 71 45.1
C05p55080 Brassica napus HOM05D000204 ORTHO05D002882 7.8e-06 53.9 71 45.1
BolC5t34176H Brassica oleracea HOM05D000204 ORTHO05D002882 7.8e-06 53.9 71 45.1
BraA05t22468Z Brassica rapa HOM05D000204 ORTHO05D002882 7.8e-06 53.9 71 45.1
ClCG11G003730 Citrullus lanatus HOM05D000057 ORTHO05D000021 7.8e-06 53.9 66 40.9
Cc05_g16250 Coffea canephora HOM05D000204 ORTHO05D002882 7.8e-06 53.9 65 44.6
Gohir.D08G144900 Gossypium hirsutum HOM05D000204 ORTHO05D001897 7.8e-06 53.9 77 35.1
Gorai.004G149700 Gossypium raimondii HOM05D000204 ORTHO05D001897 7.8e-06 53.9 77 35.1
Oeu055377.1 Olea europaea HOM05D000057 ORTHO05D001897 7.8e-06 53.9 76 34.2


User provided reference genes

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